RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 LAMA4Q16363 1823 aa20.27■□□□□ 0.84
LRP1-210ENST00000556247 SLC3A2P08195 630 aaKnown RBP20.27■□□□□ 0.84
LRP1-210ENST00000556247 MCM5P33992 734 aa20.27■□□□□ 0.84
LRP1-210ENST00000556247 APOBEC3HQ6NTF7 200 aaKnown RBP20.27■□□□□ 0.84
LRP1-210ENST00000556247 OGFOD1Q8N543 542 aa20.27■□□□□ 0.84
LRP1-210ENST00000556247 SPRYD3Q8NCJ5 442 aa20.27■□□□□ 0.84
LRP1-210ENST00000556247 TCEANC2Q96MN5 208 aa20.27■□□□□ 0.84
LRP1-210ENST00000556247 GMLQ99445 158 aa20.27■□□□□ 0.84
LRP1-210ENST00000556247 KRT23Q9C075 422 aa20.27■□□□□ 0.84
LRP1-210ENST00000556247 LIMCH1Q9UPQ0 1083 aa20.27■□□□□ 0.84
LRP1-210ENST00000556247 POLR3DP05423 398 aaPredicted RBP20.26■□□□□ 0.83
LRP1-210ENST00000556247 EXOSC10Q01780 885 aaKnown RBP20.26■□□□□ 0.83
LRP1-210ENST00000556247 CFAP100Q494V2 611 aa20.26■□□□□ 0.83
LRP1-210ENST00000556247 CDC42EP5Q6NZY7 148 aa20.26■□□□□ 0.83
LRP1-210ENST00000556247 Q6ZUG5 572 aa20.26■□□□□ 0.83
LRP1-210ENST00000556247 ZSCAN31Q96LW9 406 aaPredicted RBP20.26■□□□□ 0.83
LRP1-210ENST00000556247 TOMM22Q9NS69 142 aa20.26■□□□□ 0.83
LRP1-210ENST00000556247 MKRN1Q9UHC7 482 aaKnown RBP20.26■□□□□ 0.83
LRP1-210ENST00000556247 ZBTB12Q9Y330 459 aaPredicted RBP20.26■□□□□ 0.83
LRP1-210ENST00000556247 BAZ2AQ9UIF9 1905 aaKnown RBP20.25■□□□□ 0.83
LRP1-210ENST00000556247 CYP2D7A0A087X1C5 515 aa20.25■□□□□ 0.83
LRP1-210ENST00000556247 USP17L8P0C7I0 530 aa20.25■□□□□ 0.83
LRP1-210ENST00000556247 LMNB1P20700 586 aa20.25■□□□□ 0.83
LRP1-210ENST00000556247 COL9A3Q14050 684 aaPredicted RBP20.25■□□□□ 0.83
LRP1-210ENST00000556247 MB21D2Q8IYB1 491 aaPredicted RBP20.25■□□□□ 0.83
LRP1-210ENST00000556247 STK11IPQ8N1F8 1099 aa20.25■□□□□ 0.83
LRP1-210ENST00000556247 TMX3Q96JJ7 454 aa20.25■□□□□ 0.83
LRP1-210ENST00000556247 SAP30BPQ9UHR5 308 aaKnown RBP20.25■□□□□ 0.83
LRP1-210ENST00000556247 FZD9O00144 591 aa20.24■□□□□ 0.83
LRP1-210ENST00000556247 PRC1O43663 620 aa20.24■□□□□ 0.83
LRP1-210ENST00000556247 CYP2D6P10635 497 aa20.24■□□□□ 0.83
LRP1-210ENST00000556247 PCP11498 1178 aaKnown RBP20.24■□□□□ 0.83
LRP1-210ENST00000556247 PRELPP51888 382 aa20.24■□□□□ 0.83
LRP1-210ENST00000556247 RRP12Q5JTH9 1297 aaKnown RBP20.24■□□□□ 0.83
LRP1-210ENST00000556247 C12orf60Q5U649 245 aa20.24■□□□□ 0.83
LRP1-210ENST00000556247 INCENPQ9NQS7 918 aa20.24■□□□□ 0.83
LRP1-210ENST00000556247 FLT1P17948 1338 aa20.24■□□□□ 0.83
LRP1-210ENST00000556247 NEDD4P46934 1319 aa20.24■□□□□ 0.83
LRP1-210ENST00000556247 WDR19Q8NEZ3 1342 aa20.24■□□□□ 0.83
LRP1-210ENST00000556247 B4E1Z4 1266 aa20.23■□□□□ 0.83
LRP1-210ENST00000556247 RPS12P25398 132 aaKnown RBP20.23■□□□□ 0.83
LRP1-210ENST00000556247 MMP14P50281 582 aa20.23■□□□□ 0.83
LRP1-210ENST00000556247 PICALMQ13492 652 aa20.23■□□□□ 0.83
LRP1-210ENST00000556247 TOB2Q14106 344 aaPredicted RBP20.23■□□□□ 0.83
LRP1-210ENST00000556247 DLGAP5Q15398 846 aa20.23■□□□□ 0.83
LRP1-210ENST00000556247 CHST3Q7LGC8 479 aa20.23■□□□□ 0.83
LRP1-210ENST00000556247 TIAM2Q8IVF5 1701 aa20.23■□□□□ 0.83
LRP1-210ENST00000556247 LARP6Q9BRS8 491 aaKnown RBP20.23■□□□□ 0.83
LRP1-210ENST00000556247 LRRC2Q9BYS8 371 aa20.23■□□□□ 0.83
LRP1-210ENST00000556247 TACC3Q9Y6A5 838 aa20.23■□□□□ 0.83
LRP1-210ENST00000556247 PDE4BQ07343 736 aa20.22■□□□□ 0.83
LRP1-210ENST00000556247 SH2B1Q9NRF2 756 aaPredicted RBP20.22■□□□□ 0.83
LRP1-210ENST00000556247 PCDHAC2Q9Y5I4 1007 aa20.22■□□□□ 0.83
LRP1-210ENST00000556247 GJA3Q9Y6H8 435 aa20.22■□□□□ 0.83
LRP1-210ENST00000556247 SOCS7O14512 581 aa20.21■□□□□ 0.83
LRP1-210ENST00000556247 KDM4AO75164 1064 aa20.21■□□□□ 0.83
LRP1-210ENST00000556247 WDHD1O75717 1129 aaPredicted RBP20.21■□□□□ 0.83
LRP1-210ENST00000556247 YBX3P16989 372 aaKnown RBP eCLIP20.21■□□□□ 0.83
LRP1-210ENST00000556247 CYB5R4Q7L1T6 521 aa20.21■□□□□ 0.83
LRP1-210ENST00000556247 ESR2Q92731 530 aa20.21■□□□□ 0.83
LRP1-210ENST00000556247 BRF1Q92994 677 aa20.21■□□□□ 0.83
LRP1-210ENST00000556247 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
LRP1-210ENST00000556247 NAV1Q8NEY1 1877 aa20.21■□□□□ 0.83
LRP1-210ENST00000556247 ADAMTSL1Q8N6G6 1762 aa20.21■□□□□ 0.83
LRP1-210ENST00000556247 CDK5RAP2Q96SN8 1893 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 FGRP09769 529 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 ANTXR2P58335 489 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 CUL4AQ13619 759 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 SLC4A8Q2Y0W8 1093 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 TTC6Q86TZ1 520 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 FBXL16Q8N461 479 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 PRMT6Q96LA8 375 aaPredicted RBP20.2■□□□□ 0.82
LRP1-210ENST00000556247 TDRD3Q9H7E2 651 aaKnown RBP20.2■□□□□ 0.82
LRP1-210ENST00000556247 TMOD2Q9NZR1 351 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 ZSWIM5Q9P217 1185 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 TPCN1Q9ULQ1 816 aa20.2■□□□□ 0.82
LRP1-210ENST00000556247 LAMB1P07942 1786 aa20.19■□□□□ 0.82
LRP1-210ENST00000556247 SMIM22K7EJ46 135 aa20.19■□□□□ 0.82
LRP1-210ENST00000556247 ORC4O43929 436 aa20.19■□□□□ 0.82
LRP1-210ENST00000556247 MTMR14Q8NCE2 650 aa20.19■□□□□ 0.82
LRP1-210ENST00000556247 IDI2Q9BXS1 227 aa20.19■□□□□ 0.82
LRP1-210ENST00000556247 AGXT2Q9BYV1 514 aa20.19■□□□□ 0.82
LRP1-210ENST00000556247 SLKQ9H2G2 1235 aaPredicted RBP20.19■□□□□ 0.82
LRP1-210ENST00000556247 ZNF287Q9HBT7 754 aa20.19■□□□□ 0.82
LRP1-210ENST00000556247 DDX4Q9NQI0 724 aaKnown RBP20.19■□□□□ 0.82
LRP1-210ENST00000556247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.19■□□□□ 0.82
LRP1-210ENST00000556247 MYH1P12882 1939 aa20.18■□□□□ 0.82
LRP1-210ENST00000556247 SPDYE2BA6NHP3 402 aa20.18■□□□□ 0.82
LRP1-210ENST00000556247 IFIT3O14879 490 aaKnown RBP20.18■□□□□ 0.82
LRP1-210ENST00000556247 RANBP6O60518 1105 aaKnown RBP20.18■□□□□ 0.82
LRP1-210ENST00000556247 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
LRP1-210ENST00000556247 SPDYE6P0CI01 402 aa20.18■□□□□ 0.82
LRP1-210ENST00000556247 NT5C2P49902 561 aa20.18■□□□□ 0.82
LRP1-210ENST00000556247 GMPSP49915 693 aaPredicted RBP20.18■□□□□ 0.82
LRP1-210ENST00000556247 PLCD1P51178 756 aa20.18■□□□□ 0.82
LRP1-210ENST00000556247 EVX2Q03828 476 aa20.18■□□□□ 0.82
LRP1-210ENST00000556247 SART3Q15020 963 aaKnown RBP20.18■□□□□ 0.82
LRP1-210ENST00000556247 GPR162Q16538 588 aa20.18■□□□□ 0.82
LRP1-210ENST00000556247 DPF2Q92785 391 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms