RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 SPATA5Q8NB90 893 aa11.1□□□□□ -0.63
AC004828.1-201ENST00000555303 SSH3Q8TE77 659 aa11.1□□□□□ -0.63
AC004828.1-201ENST00000555303 NEUROD6Q96NK8 337 aa11.1□□□□□ -0.63
AC004828.1-201ENST00000555303 CDK5RAP2Q96SN8 1893 aa11.1□□□□□ -0.63
AC004828.1-201ENST00000555303 GPR75-ASB3A0A0A6YYF3 556 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 BTBD19C9JJ37 291 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 BTDP43251 543 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 PRMT2P55345 433 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 MAP3K10Q02779 954 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 MECOMQ03112 1051 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 KIF22Q14807 665 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 ARMC5Q96C12 935 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 TNNQ9UQP3 1299 aa11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 MKI67P46013 3256 aaKnown RBP11.09□□□□□ -0.63
AC004828.1-201ENST00000555303 MGAMO43451 1857 aa11.08□□□□□ -0.64
AC004828.1-201ENST00000555303 LOC285556D6RIA3 1793 aa11.08□□□□□ -0.64
AC004828.1-201ENST00000555303 CXCL11O14625 94 aa11.08□□□□□ -0.64
AC004828.1-201ENST00000555303 ZSCAN29Q8IWY8 852 aaPredicted RBP11.08□□□□□ -0.64
AC004828.1-201ENST00000555303 SCYL3Q8IZE3 742 aa11.08□□□□□ -0.64
AC004828.1-201ENST00000555303 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.08□□□□□ -0.64
AC004828.1-201ENST00000555303 NSUN4Q96CB9 384 aaKnown RBP11.08□□□□□ -0.64
AC004828.1-201ENST00000555303 ZNF512BQ96KM6 892 aaPredicted RBP11.08□□□□□ -0.64
AC004828.1-201ENST00000555303 PICK1Q9NRD5 415 aa11.08□□□□□ -0.64
AC004828.1-201ENST00000555303 ZSWIM8A7E2V4 1837 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 MYO5AQ9Y4I1 1855 aaKnown RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 PHF20L1A8MW92 1017 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 TBC1D12O60347 775 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 CTNND1O60716 968 aaKnown RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 MCAMP43121 646 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 RHBDL3P58872 404 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 LACTBP83111 547 aaPredicted RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 ATP8B2P98198 1209 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 OS9Q13438 667 aaPredicted RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 TNNI3KQ59H18 835 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 CCDC158Q5M9N0 1113 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 PRPF38BQ5VTL8 546 aaKnown RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 FASTKD5Q7L8L6 764 aaKnown RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 NBPF11Q86T75 865 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 ITPRIPQ8IWB1 547 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 ZFPM1Q8IX07 1006 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 MIER1Q8N108 512 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 PARK7Q99497 189 aaKnown RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 NOL10Q9BSC4 688 aaKnown RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 DDX4Q9NQI0 724 aaKnown RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 SLC45A1Q9Y2W3 748 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 NOP58Q9Y2X3 529 aaKnown RBP11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 FPGT-TNNI3KV9GXZ4 949 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 ADGRA2Q96PE1 1338 aa11.07□□□□□ -0.64
AC004828.1-201ENST00000555303 A0A0G2JLL6 359 aaPredicted RBP11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 PDHXO00330 501 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 MS4A1P11836 297 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 PLCG2P16885 1265 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 PICALMQ13492 652 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 MOGSQ13724 837 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 SLC9C1Q4G0N8 1177 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 TTC39AQ5SRH9 613 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 TMED8Q6PL24 325 aaPredicted RBP11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 C17orf99Q6UX52 265 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 SH3BP5LQ7L8J4 393 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 PRRT2Q7Z6L0 340 aaPredicted RBP11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 ZNF384Q8TF68 577 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 RAI14Q9P0K7 980 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 LRP2BPQ9P2M1 347 aa11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 KIAA0100Q14667 2235 aaKnown RBP11.06□□□□□ -0.64
AC004828.1-201ENST00000555303 SIPA1L1O43166 1804 aa11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 DDTLA6NHG4 134 aaPredicted RBP11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 ZBTB7BO15156 539 aaPredicted RBP11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 SURF6O75683 361 aaKnown RBP11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 BAG3O95817 575 aa11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 PTPRAP18433 802 aa11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 PI16Q6UXB8 463 aa11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 CERS3Q8IU89 383 aa11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 ZNF333Q96JL9 665 aa11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 OSBPL5Q9H0X9 879 aaPredicted RBP11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 HERC5Q9UII4 1024 aaKnown RBP11.05□□□□□ -0.64
AC004828.1-201ENST00000555303 HOXD10P28358 340 aa11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 CAP1Q01518 475 aa11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 NAA16Q6N069 864 aaPredicted RBP11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 TBC1D9Q6ZT07 1266 aa11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 TEX11Q8IYF3 940 aa11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 TMEM106CQ9BVX2 250 aa11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 DHX36Q9H2U1 1008 aaKnown RBP11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 AFG3L2Q9Y4W6 797 aa11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 PTCH2Q9Y6C5 1203 aa11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 ZHX2Q9Y6X8 837 aa11.04□□□□□ -0.64
AC004828.1-201ENST00000555303 BCRP11274 1271 aa11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 RLBP1P12271 317 aa11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 PPP4CP60510 307 aa11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 HSP90AB4PQ58FF6 505 aa11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 GPAT2Q6NUI2 795 aa11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 CEP85Q6P2H3 762 aa11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 DBNDD2Q9BQY9 259 aa11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 C1orf115Q9H7X2 142 aa11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 MYH1P12882 1939 aa11.03□□□□□ -0.64
AC004828.1-201ENST00000555303 POTEFA5A3E0 1075 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms