RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 IGF2-ASQ6U949 168 aa8.34□□□□□ -1.07
CKS1BP1-201ENST00000555221 BEND7Q8N7W2 519 aaPredicted RBP8.34□□□□□ -1.07
CKS1BP1-201ENST00000555221 UBASH3BQ8TF42 649 aa8.34□□□□□ -1.07
CKS1BP1-201ENST00000555221 ELMO3Q96BJ8 720 aa8.34□□□□□ -1.07
CKS1BP1-201ENST00000555221 FERD3LQ96RJ6 166 aa8.34□□□□□ -1.07
CKS1BP1-201ENST00000555221 RUSC1Q9BVN2 902 aa8.34□□□□□ -1.07
CKS1BP1-201ENST00000555221 MRPL18Q9H0U6 180 aaKnown RBP8.34□□□□□ -1.07
CKS1BP1-201ENST00000555221 GFRA2O00451 464 aa8.33□□□□□ -1.08
CKS1BP1-201ENST00000555221 AOC2O75106 756 aa8.33□□□□□ -1.08
CKS1BP1-201ENST00000555221 DLGAP3O95886 979 aa8.33□□□□□ -1.08
CKS1BP1-201ENST00000555221 RBL2Q08999 1139 aa8.33□□□□□ -1.08
CKS1BP1-201ENST00000555221 LRFN4Q6PJG9 635 aa8.33□□□□□ -1.08
CKS1BP1-201ENST00000555221 PLPPR2Q96GM1 343 aa8.33□□□□□ -1.08
CKS1BP1-201ENST00000555221 CRBNQ96SW2 442 aa8.33□□□□□ -1.08
CKS1BP1-201ENST00000555221 WDR18Q9BV38 432 aa8.33□□□□□ -1.08
CKS1BP1-201ENST00000555221 RNF208Q9H0X6 261 aa8.33□□□□□ -1.08
CKS1BP1-201ENST00000555221 MEGF11A6BM72 1044 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 INPP5AQ14642 412 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 ZC3H12AQ5D1E8 599 aaKnown RBP8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 NUTM2GQ5VZR2 741 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 GK5Q6ZS86 529 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 ACAD11Q709F0 780 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 ZSCAN1Q8NBB4 408 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 WDR89Q96FK6 387 aaPredicted RBP8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 DNAJC2Q99543 621 aaKnown RBP8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 TMPRSS13Q9BYE2 586 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 EHMT1Q9H9B1 1298 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 CYP4F12Q9HCS2 524 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 ZNRF3Q9ULT6 936 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 PPT2Q9UMR5 302 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 PCDHB14Q9Y5E9 798 aa8.32□□□□□ -1.08
CKS1BP1-201ENST00000555221 ATE1O95260 518 aa8.31□□□□□ -1.08
CKS1BP1-201ENST00000555221 ID3Q02535 119 aa8.31□□□□□ -1.08
CKS1BP1-201ENST00000555221 PDE4BQ07343 736 aa8.31□□□□□ -1.08
CKS1BP1-201ENST00000555221 MLECQ14165 292 aa8.31□□□□□ -1.08
CKS1BP1-201ENST00000555221 CKAP2LQ8IYA6 745 aa8.31□□□□□ -1.08
CKS1BP1-201ENST00000555221 OR6P1Q8NGX9 317 aa8.31□□□□□ -1.08
CKS1BP1-201ENST00000555221 POLR3KQ9Y2Y1 108 aaPredicted RBP8.31□□□□□ -1.08
CKS1BP1-201ENST00000555221 PRR36Q9H6K5 1346 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 FAM229AH3BQW9 127 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 GRIN3BO60391 1043 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 WISP1O95388 367 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 SELPP16109 830 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 CDK8P49336 464 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 EIF6P56537 245 aaKnown RBP8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 ERVK-24P63145 666 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 CLCQ05315 142 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 FBXW10Q5XX13 1052 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 CCDC81Q6ZN84 652 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 KIAA1211Q6ZU35 1233 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 CYFIP1Q7L576 1253 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 ANAPC16Q96DE5 110 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 ZNF408Q9H9D4 720 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 SUGCTQ9HAC7 445 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 PCDHGC5Q9Y5F6 944 aa8.3□□□□□ -1.08
CKS1BP1-201ENST00000555221 DCDC2CA8MYV0 355 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 SPATA31C1P0DKV0 1188 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 INSM1Q01101 510 aaPredicted RBP8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 LRRFIP1Q32MZ4 808 aaKnown RBP8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 TNNI3KQ59H18 835 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 AKAP4Q5JQC9 854 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 NBPF6Q5VWK0 638 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 TMEM130Q8N3G9 435 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 SMG8Q8ND04 991 aaKnown RBP8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 SHDQ96IW2 340 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 NBPF4Q96M43 638 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 PICK1Q9NRD5 415 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 MRVI1Q9Y6F6 885 aa8.29□□□□□ -1.08
CKS1BP1-201ENST00000555221 PRAMEF27A3QJZ7 478 aa8.28□□□□□ -1.08
CKS1BP1-201ENST00000555221 HTR3BO95264 441 aa8.28□□□□□ -1.08
CKS1BP1-201ENST00000555221 GIPRP48546 466 aa8.28□□□□□ -1.08
CKS1BP1-201ENST00000555221 RBBP8NLQ8NC74 664 aaPredicted RBP8.28□□□□□ -1.08
CKS1BP1-201ENST00000555221 SCARF2Q96GP6 870 aaPredicted RBP8.28□□□□□ -1.08
CKS1BP1-201ENST00000555221 ATXN3LQ9H3M9 355 aa8.28□□□□□ -1.08
CKS1BP1-201ENST00000555221 PRKAG3Q9UGI9 489 aa8.28□□□□□ -1.08
CKS1BP1-201ENST00000555221 ADAMTS8Q9UP79 889 aa8.28□□□□□ -1.08
CKS1BP1-201ENST00000555221 FANCGO15287 622 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 TMPRSS2O15393 492 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 ADH5P11766 374 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 ETFBP38117 255 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 ANKRD34AQ69YU3 496 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 FDX2Q6P4F2 183 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 DPH6Q7L8W6 267 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 C12orf40Q86WS4 652 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 NACC1Q96RE7 527 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 LNPKQ9C0E8 428 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 CRIM1Q9NZV1 1036 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 ADAM30Q9UKF2 790 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 PPP1R9AQ9ULJ8 1098 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 AP4E1Q9UPM8 1137 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 HIF3AQ9Y2N7 669 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 R3HCC1Q9Y3T6 440 aaKnown RBP8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 CSADQ9Y600 493 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 CNTNAP5Q8WYK1 1306 aa8.27□□□□□ -1.09
CKS1BP1-201ENST00000555221 PLCG1P19174 1290 aa8.26□□□□□ -1.09
CKS1BP1-201ENST00000555221 ETF1P62495 437 aaKnown RBP8.26□□□□□ -1.09
CKS1BP1-201ENST00000555221 RING1Q06587 406 aa8.26□□□□□ -1.09
CKS1BP1-201ENST00000555221 SOX4Q06945 474 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms