RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 TNFRSF25Q93038 417 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 MAP7D2Q96T17 732 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 UTP14AQ9BVJ6 771 aaKnown RBP14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 SEC31BQ9NQW1 1179 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 GOLGA6L6A8MZA4 724 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 NEMFO60524 1076 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 PFKFB1P16118 471 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 WASHC4Q2M389 1173 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 KRT40Q6A162 431 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 CCDC186Q7Z3E2 898 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 CNNM2Q9H8M5 875 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 BCL2L12Q9HB09 334 aa14.66□□□□□ -0.06
PPP4R3A-206ENST00000554943 LRMPQ12912 555 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 VPS37DQ86XT2 251 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 LCORLQ8N3X6 602 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 ZNF579Q8NAF0 562 aaKnown RBP14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 AIFM3Q96NN9 605 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 LOC102724428A0A0B4J2F2 783 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 IGSF3O75054 1194 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 SIK1P57059 783 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 NPY5RQ15761 445 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 CCDC9Q9Y3X0 531 aaKnown RBP14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 MYO1BO43795 1136 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 ZNF202O95125 648 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 MMP1P03956 469 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 DPCR1Q3MIW9 517 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 CNNM1Q9NRU3 951 aa14.65□□□□□ -0.06
PPP4R3A-206ENST00000554943 CDKL5O76039 1030 aa14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 BMP6P22004 513 aa14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 MTERF4Q7Z6M4 381 aaKnown RBP14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 FOXP4Q8IVH2 680 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 FOXP1Q9H334 677 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 TBC1D2BQ9UPU7 963 aa14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 B4E1Z4 1266 aa14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 METAP2P50579 478 aaKnown RBP eCLIP14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 CCDC85AQ96PX6 553 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 INCENPQ9NQS7 918 aa14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 ROBO3Q96MS0 1386 aa14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 A0A1B0GVL5 298 aa14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 PKN1Q16512 942 aa14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 FBXO2Q9UK22 296 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3A-206ENST00000554943 UBE2Q2LH0YL09 131 aa14.63□□□□□ -0.07
PPP4R3A-206ENST00000554943 METTL16Q86W50 562 aaKnown RBP14.63□□□□□ -0.07
PPP4R3A-206ENST00000554943 KRT23Q9C075 422 aa14.63□□□□□ -0.07
PPP4R3A-206ENST00000554943 BSDC1Q9NW68 430 aaPredicted RBP14.63□□□□□ -0.07
PPP4R3A-206ENST00000554943 GOLGA6L4A6NEF3 574 aa14.63□□□□□ -0.07
PPP4R3A-206ENST00000554943 CHRNDQ07001 517 aa14.63□□□□□ -0.07
PPP4R3A-206ENST00000554943 FBXO33Q7Z6M2 555 aa14.63□□□□□ -0.07
PPP4R3A-206ENST00000554943 BRIP1Q9BX63 1249 aa14.63□□□□□ -0.07
PPP4R3A-206ENST00000554943 CLIP2Q9UDT6 1046 aa14.63□□□□□ -0.07
PPP4R3A-206ENST00000554943 PTMAP06454 111 aaKnown RBP14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 GUCY1B3Q02153 619 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 CCDC73Q6ZRK6 1079 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 CRACR2BQ8N4Y2 399 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 MAGEB6Q8N7X4 407 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 ALG1Q9BT22 464 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 MKRN1Q9UHC7 482 aaKnown RBP14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 MBD4O95243 580 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 PCP11498 1178 aaKnown RBP14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 GUCY1A2P33402 732 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 PPP2R5BQ15173 497 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 CCDC152Q4G0S7 254 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 GORABQ5T7V8 394 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 FAM53CQ9NYF3 392 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 KINO60870 393 aaKnown RBP14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 CUTAO60888 179 aa14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 HSP90AA2PQ14568 343 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 SF3A1Q15459 793 aaKnown RBP14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 RALYLQ86SE5 291 aaKnown RBP14.62□□□□□ -0.07
PPP4R3A-206ENST00000554943 ZBTB43O43298 467 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 PRKAB2O43741 272 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 TM4SF1P30408 202 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 ME1P48163 572 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 BCAMP50895 628 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 TBX2Q13207 712 aaPredicted RBP14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 UBE4AQ14139 1066 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 TAF7LQ5H9L4 462 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 SH3RF1Q7Z6J0 888 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 LINC00116Q8NCU8 138 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 MED15Q96RN5 788 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 PTPREP23469 700 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 MAP3K12Q12852 859 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 TMEM139Q8IV31 216 aa14.61□□□□□ -0.07
PPP4R3A-206ENST00000554943 SEMA3EO15041 775 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 ZNF18P17022 549 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 CTDSPL2Q05D32 466 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 RC3H1Q5TC82 1133 aaKnown RBP14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 NOSTRINQ8IVI9 506 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 CDC5LQ99459 802 aaKnown RBP14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 ARMT1Q9H993 441 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 SNAP23O00161 211 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 CEBPZQ03701 1054 aaKnown RBP14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 ARMCX5Q6P1M9 558 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 SPC24Q8NBT2 197 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 PHF20Q9BVI0 1012 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 ANKRD31Q8N7Z5 1873 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 C10orf71Q711Q0 1435 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 A0A087WWV3 80 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms