RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 DIXDC1Q155Q3 683 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 ZSCAN23Q3MJ62 389 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 GADD45BO75293 160 aaPredicted RBP19.14■□□□□ 0.66
PCNX1-209ENST00000554879 ADD1P35611 737 aaKnown RBP19.14■□□□□ 0.66
PCNX1-209ENST00000554879 SLC27A3Q5K4L6 730 aa19.14■□□□□ 0.66
PCNX1-209ENST00000554879 TEX11Q8IYF3 940 aa19.14■□□□□ 0.66
PCNX1-209ENST00000554879 TERF1P54274 439 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 CMTR1Q8N1G2 835 aaKnown RBP19.14■□□□□ 0.65
PCNX1-209ENST00000554879 TGFBRAP1Q8WUH2 860 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 SCN11AQ9UI33 1791 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 KLRK1P26718 216 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 PPARAQ07869 468 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 TOB2Q14106 344 aaPredicted RBP19.14■□□□□ 0.65
PCNX1-209ENST00000554879 FAM47AQ5JRC9 791 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 NUP62CLQ9H1M0 184 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 LRRC4BQ9NT99 713 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 TSPY3P0CV98 308 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 TSPY8P0CW00 308 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 ADRA2BP18089 450 aa19.14■□□□□ 0.65
PCNX1-209ENST00000554879 EN1Q05925 392 aaPredicted RBP19.14■□□□□ 0.65
PCNX1-209ENST00000554879 MED23Q9ULK4 1368 aa19.13■□□□□ 0.65
PCNX1-209ENST00000554879 SKIDA1Q1XH10 827 aa19.13■□□□□ 0.65
PCNX1-209ENST00000554879 VAT1LQ9HCJ6 419 aa19.13■□□□□ 0.65
PCNX1-209ENST00000554879 LMBRD1Q9NUN5 540 aa19.13■□□□□ 0.65
PCNX1-209ENST00000554879 GOLGA6L19H0YKK7 550 aa19.13■□□□□ 0.65
PCNX1-209ENST00000554879 C2CD5Q86YS7 1000 aa19.13■□□□□ 0.65
PCNX1-209ENST00000554879 KCPQ6ZWJ8 1503 aa19.13■□□□□ 0.65
PCNX1-209ENST00000554879 UBE2HP62256 183 aa19.13■□□□□ 0.65
PCNX1-209ENST00000554879 CREBRFQ8IUR6 639 aa19.13■□□□□ 0.65
PCNX1-209ENST00000554879 ARID4AP29374 1257 aaPredicted RBP19.12■□□□□ 0.65
PCNX1-209ENST00000554879 WASF1Q92558 559 aa19.12■□□□□ 0.65
PCNX1-209ENST00000554879 KAT14Q9H8E8 782 aa19.12■□□□□ 0.65
PCNX1-209ENST00000554879 MTMR6Q9Y217 621 aa19.12■□□□□ 0.65
PCNX1-209ENST00000554879 hCG_1642624A0A1W2PR95 340 aa19.12■□□□□ 0.65
PCNX1-209ENST00000554879 PDIA3P30101 505 aaKnown RBP19.12■□□□□ 0.65
PCNX1-209ENST00000554879 GOLGA6L1Q8N7Z2 621 aa19.12■□□□□ 0.65
PCNX1-209ENST00000554879 ZNF287Q9HBT7 754 aa19.12■□□□□ 0.65
PCNX1-209ENST00000554879 MECOMQ03112 1051 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 GIMAP6Q6P9H5 292 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 RBSNQ9H1K0 784 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 LEMD3Q9Y2U8 911 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 PPEF1O14829 653 aaPredicted RBP19.11■□□□□ 0.65
PCNX1-209ENST00000554879 ATP2B4P23634 1241 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 BRD2P25440 801 aaKnown RBP19.11■□□□□ 0.65
PCNX1-209ENST00000554879 GTF2A1P52655 376 aaPredicted RBP19.11■□□□□ 0.65
PCNX1-209ENST00000554879 COL18A1P39060 1754 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 BAG6P46379 1132 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 NOLC1Q14978 699 aaKnown RBP eCLIP19.11■□□□□ 0.65
PCNX1-209ENST00000554879 PDE6BP35913 854 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 SCNN1DP51172 638 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 FLAD1Q8NFF5 587 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 TMEM87BQ96K49 555 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 USP25Q9UHP3 1055 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 ABCC12Q96J65 1359 aa19.11■□□□□ 0.65
PCNX1-209ENST00000554879 ZSCAN16Q9H4T2 348 aaPredicted RBP19.1■□□□□ 0.65
PCNX1-209ENST00000554879 BCL9LQ86UU0 1499 aa19.1■□□□□ 0.65
PCNX1-209ENST00000554879 TBC1D10CQ8IV04 446 aa19.1■□□□□ 0.65
PCNX1-209ENST00000554879 TMTC2Q8N394 836 aa19.1■□□□□ 0.65
PCNX1-209ENST00000554879 BBOX1O75936 387 aa19.1■□□□□ 0.65
PCNX1-209ENST00000554879 ALDH1B1P30837 517 aa19.1■□□□□ 0.65
PCNX1-209ENST00000554879 BCL2L12Q9HB09 334 aa19.1■□□□□ 0.65
PCNX1-209ENST00000554879 USP54Q70EL1 1684 aa19.1■□□□□ 0.65
PCNX1-209ENST00000554879 GYS1P13807 737 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 CCDC183Q5T5S1 534 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 ZDHHC9Q9Y397 364 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 PFKFB2O60825 505 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 TEX35Q5T0J7 233 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 HOMER1Q86YM7 354 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 CCDC34Q96HJ3 373 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 EYA3Q99504 573 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 SLIT2O94813 1529 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 PRIMPOLQ96LW4 560 aa19.09■□□□□ 0.65
PCNX1-209ENST00000554879 MARCKSP29966 332 aaPredicted RBP19.08■□□□□ 0.64
PCNX1-209ENST00000554879 JMYQ8N9B5 988 aa19.08■□□□□ 0.64
PCNX1-209ENST00000554879 FSIP1Q8NA03 581 aa19.08■□□□□ 0.64
PCNX1-209ENST00000554879 MYRIPQ8NFW9 859 aa19.08■□□□□ 0.64
PCNX1-209ENST00000554879 ZSWIM5Q9P217 1185 aa19.08■□□□□ 0.64
PCNX1-209ENST00000554879 CCDC192P0DO97 292 aa19.08■□□□□ 0.64
PCNX1-209ENST00000554879 DBNDD1Q9H9R9 158 aa19.08■□□□□ 0.64
PCNX1-209ENST00000554879 GPSM2P81274 684 aa19.07■□□□□ 0.64
PCNX1-209ENST00000554879 TMOD2Q9NZR1 351 aa19.07■□□□□ 0.64
PCNX1-209ENST00000554879 TTF2Q9UNY4 1162 aaKnown RBP19.07■□□□□ 0.64
PCNX1-209ENST00000554879 MAP3K11Q16584 847 aa19.07■□□□□ 0.64
PCNX1-209ENST00000554879 ZNF274Q96GC6 653 aaPredicted RBP19.07■□□□□ 0.64
PCNX1-209ENST00000554879 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCNX1-209ENST00000554879 POLR3GO15318 223 aaPredicted RBP19.07■□□□□ 0.64
PCNX1-209ENST00000554879 TXNRD3Q86VQ6 643 aa19.07■□□□□ 0.64
PCNX1-209ENST00000554879 KIAA0825Q8IV33 1275 aa19.07■□□□□ 0.64
PCNX1-209ENST00000554879 DACT1Q9NYF0 836 aa19.07■□□□□ 0.64
PCNX1-209ENST00000554879 EIF6P56537 245 aaKnown RBP19.07■□□□□ 0.64
PCNX1-209ENST00000554879 COL9A3Q14050 684 aaPredicted RBP19.07■□□□□ 0.64
PCNX1-209ENST00000554879 LLPHQ9BRT6 129 aaKnown RBP19.07■□□□□ 0.64
PCNX1-209ENST00000554879 FGFR2P21802 821 aa19.06■□□□□ 0.64
PCNX1-209ENST00000554879 NLRP5P59047 1200 aa19.06■□□□□ 0.64
PCNX1-209ENST00000554879 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.06■□□□□ 0.64
PCNX1-209ENST00000554879 V9GYY5 206 aaPredicted RBP19.06■□□□□ 0.64
PCNX1-209ENST00000554879 RFX7Q2KHR2 1363 aa19.06■□□□□ 0.64
PCNX1-209ENST00000554879 TCP10Q12799 353 aa19.06■□□□□ 0.64
PCNX1-209ENST00000554879 CCAR1Q8IX12 1150 aaKnown RBP19.06■□□□□ 0.64
PCNX1-209ENST00000554879 CCDC112Q8NEF3 446 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms