RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 FAM198AQ9UFP1 575 aa17.28■□□□□ 0.36
SPTLC2-202ENST00000554365 SRRDQ9UH36 339 aa17.28■□□□□ 0.36
SPTLC2-202ENST00000554365 COLQQ9Y215 455 aaPredicted RBP17.28■□□□□ 0.36
SPTLC2-202ENST00000554365 OSBPP22059 807 aa17.27■□□□□ 0.36
SPTLC2-202ENST00000554365 HOXD10P28358 340 aa17.27■□□□□ 0.36
SPTLC2-202ENST00000554365 MTFR1Q15390 333 aa17.27■□□□□ 0.36
SPTLC2-202ENST00000554365 NOL9Q5SY16 702 aaKnown RBP17.27■□□□□ 0.36
SPTLC2-202ENST00000554365 ZFPM1Q8IX07 1006 aa17.27■□□□□ 0.36
SPTLC2-202ENST00000554365 AK9Q5TCS8 1911 aa17.27■□□□□ 0.35
SPTLC2-202ENST00000554365 MYPNQ86TC9 1320 aa17.26■□□□□ 0.35
SPTLC2-202ENST00000554365 CIAO1O76071 339 aa17.26■□□□□ 0.35
SPTLC2-202ENST00000554365 GNAI2P04899 355 aa17.26■□□□□ 0.35
SPTLC2-202ENST00000554365 PHKA1P46020 1223 aa17.26■□□□□ 0.35
SPTLC2-202ENST00000554365 FXR1P51114 621 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPTLC2-202ENST00000554365 MOGSQ13724 837 aa17.26■□□□□ 0.35
SPTLC2-202ENST00000554365 DENND2AQ9ULE3 1009 aa17.26■□□□□ 0.35
SPTLC2-202ENST00000554365 LRRFIP2Q9Y608 721 aaKnown RBP17.26■□□□□ 0.35
SPTLC2-202ENST00000554365 ADGRA2Q96PE1 1338 aa17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 H0YGN5 161 aa17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 SEMA3EO15041 775 aa17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 CYP2C8P10632 490 aa17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 GRK4P32298 578 aa17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 ZSCAN29Q8IWY8 852 aaPredicted RBP17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 BIN2Q9UBW5 565 aaPredicted RBP17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 FBXO3Q9UK99 471 aa17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 PA2G4Q9UQ80 394 aaKnown RBP17.25■□□□□ 0.35
SPTLC2-202ENST00000554365 CXCL11O14625 94 aa17.24■□□□□ 0.35
SPTLC2-202ENST00000554365 IL15P40933 162 aaPredicted RBP17.24■□□□□ 0.35
SPTLC2-202ENST00000554365 RGS3P49796 1198 aa17.24■□□□□ 0.35
SPTLC2-202ENST00000554365 GPAT2Q6NUI2 795 aa17.24■□□□□ 0.35
SPTLC2-202ENST00000554365 CEP85Q6P2H3 762 aa17.24■□□□□ 0.35
SPTLC2-202ENST00000554365 SHISA4Q96DD7 197 aa17.24■□□□□ 0.35
SPTLC2-202ENST00000554365 PICK1Q9NRD5 415 aa17.24■□□□□ 0.35
SPTLC2-202ENST00000554365 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
SPTLC2-202ENST00000554365 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
SPTLC2-202ENST00000554365 CCL5P13501 91 aa17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 ADORA1P30542 326 aa17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 FCGRTP55899 365 aa17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 PRKCZQ05513 592 aa17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 CCDC102BQ68D86 513 aa17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 GADL1Q6ZQY3 521 aa17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 DZIP1Q86YF9 867 aaKnown RBP17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 SCYL3Q8IZE3 742 aa17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 DPF3Q92784 378 aa17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
SPTLC2-202ENST00000554365 ENTPD3O75355 529 aa17.22■□□□□ 0.35
SPTLC2-202ENST00000554365 UBXN2AP68543 259 aa17.22■□□□□ 0.35
SPTLC2-202ENST00000554365 PICALMQ13492 652 aa17.22■□□□□ 0.35
SPTLC2-202ENST00000554365 FASTKD5Q7L8L6 764 aaKnown RBP17.22■□□□□ 0.35
SPTLC2-202ENST00000554365 NKX2-3Q8TAU0 364 aa17.22■□□□□ 0.35
SPTLC2-202ENST00000554365 IDI2Q9BXS1 227 aa17.22■□□□□ 0.35
SPTLC2-202ENST00000554365 ATRNL1Q5VV63 1379 aa17.22■□□□□ 0.35
SPTLC2-202ENST00000554365 DOCK2Q92608 1830 aa17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 A0A0G2JLL6 359 aaPredicted RBP17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 PHF20L1A8MW92 1017 aa17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 BCRP11274 1271 aa17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 PTPRAP18433 802 aa17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 MTX1Q13505 466 aa17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 RASGRF1Q13972 1273 aa17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 SH3BP5LQ7L8J4 393 aa17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 PRRT2Q7Z6L0 340 aaPredicted RBP17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 RNF208Q9H0X6 261 aa17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 HDAC5Q9UQL6 1122 aa17.21■□□□□ 0.35
SPTLC2-202ENST00000554365 GAKO14976 1311 aa17.21■□□□□ 0.34
SPTLC2-202ENST00000554365 PNMA6EA0A0J9YXQ4 647 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 IGHDP01880 384 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 GJB1P08034 283 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 SLURP2P0DP57 97 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 GJA8P48165 433 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 TIMM10P62072 90 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 RPAP2Q8IXW5 612 aaPredicted RBP17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 GABRQQ9UN88 632 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 AFG3L2Q9Y4W6 797 aa17.2■□□□□ 0.34
SPTLC2-202ENST00000554365 DDTLA6NHG4 134 aaPredicted RBP17.19■□□□□ 0.34
SPTLC2-202ENST00000554365 BTDP43251 543 aa17.19■□□□□ 0.34
SPTLC2-202ENST00000554365 HDAC1Q13547 482 aaPredicted RBP17.19■□□□□ 0.34
SPTLC2-202ENST00000554365 POLA2Q14181 598 aa17.19■□□□□ 0.34
SPTLC2-202ENST00000554365 B4GALNT3Q6L9W6 998 aa17.19■□□□□ 0.34
SPTLC2-202ENST00000554365 SLAIN1Q8ND83 568 aa17.19■□□□□ 0.34
SPTLC2-202ENST00000554365 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
SPTLC2-202ENST00000554365 DDX4Q9NQI0 724 aaKnown RBP17.19■□□□□ 0.34
SPTLC2-202ENST00000554365 MYH2Q9UKX2 1941 aa17.19■□□□□ 0.34
SPTLC2-202ENST00000554365 RFX7Q2KHR2 1363 aa17.18■□□□□ 0.34
SPTLC2-202ENST00000554365 TRIM75PA6NK02 468 aa17.18■□□□□ 0.34
SPTLC2-202ENST00000554365 ADCY3O60266 1144 aa17.18■□□□□ 0.34
SPTLC2-202ENST00000554365 SPTY2D1Q68D10 685 aaPredicted RBP17.18■□□□□ 0.34
SPTLC2-202ENST00000554365 SMCR8Q8TEV9 937 aaPredicted RBP17.18■□□□□ 0.34
SPTLC2-202ENST00000554365 HTATIP2Q9BUP3 242 aa17.18■□□□□ 0.34
SPTLC2-202ENST00000554365 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.18■□□□□ 0.34
SPTLC2-202ENST00000554365 A0A1B0GUL7 405 aa17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 CTNND1O60716 968 aaKnown RBP17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 FLT3LGP49771 235 aa17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 TFCP2Q12800 502 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms