RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 GRIN3BO60391 1043 aa8□□□□□ -1.13
SYNE2-210ENST00000553455 MCM4P33991 863 aa8□□□□□ -1.13
SYNE2-210ENST00000553455 ZNF165P49910 485 aa8□□□□□ -1.13
SYNE2-210ENST00000553455 RAC1P63000 192 aa8□□□□□ -1.13
SYNE2-210ENST00000553455 GK5Q6ZS86 529 aa8□□□□□ -1.13
SYNE2-210ENST00000553455 HIRIP3Q9BW71 556 aaPredicted RBP8□□□□□ -1.13
SYNE2-210ENST00000553455 EHMT1Q9H9B1 1298 aa8□□□□□ -1.13
SYNE2-210ENST00000553455 PRR36Q9H6K5 1346 aa8□□□□□ -1.13
SYNE2-210ENST00000553455 FAM229AH3BQW9 127 aa7.99□□□□□ -1.13
SYNE2-210ENST00000553455 AOC2O75106 756 aa7.99□□□□□ -1.13
SYNE2-210ENST00000553455 ATE1O95260 518 aa7.99□□□□□ -1.13
SYNE2-210ENST00000553455 ZC3H12AQ5D1E8 599 aaKnown RBP7.99□□□□□ -1.13
SYNE2-210ENST00000553455 CYFIP1Q7L576 1253 aa7.99□□□□□ -1.13
SYNE2-210ENST00000553455 FAM169BQ8N8A8 192 aa7.99□□□□□ -1.13
SYNE2-210ENST00000553455 DCAF11Q8TEB1 546 aa7.99□□□□□ -1.13
SYNE2-210ENST00000553455 TMPRSS13Q9BYE2 586 aa7.99□□□□□ -1.13
SYNE2-210ENST00000553455 PCDHB14Q9Y5E9 798 aa7.99□□□□□ -1.13
SYNE2-210ENST00000553455 SNCAIPQ9Y6H5 919 aa7.99□□□□□ -1.13
SYNE2-210ENST00000553455 DCDC2CA8MYV0 355 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 GIPRP48546 466 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 RING1Q06587 406 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 DUOXA2Q1HG44 320 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 HP1BP3Q5SSJ5 553 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-210ENST00000553455 DIEXFQ68CQ4 756 aaKnown RBP7.98□□□□□ -1.13
SYNE2-210ENST00000553455 KIAA1211Q6ZU35 1233 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 PMFBP1Q8TBY8 1022 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 CPLX3Q8WVH0 158 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 ANAPC16Q96DE5 110 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 FERD3LQ96RJ6 166 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 CORINQ9Y5Q5 1042 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 SYNGAP1Q96PV0 1343 aa7.98□□□□□ -1.13
SYNE2-210ENST00000553455 EXOSC6Q5RKV6 272 aaKnown RBP7.97□□□□□ -1.13
SYNE2-210ENST00000553455 HDXQ7Z353 690 aa7.97□□□□□ -1.13
SYNE2-210ENST00000553455 PRKAG3Q9UGI9 489 aa7.97□□□□□ -1.13
SYNE2-210ENST00000553455 MKL2Q9ULH7 1088 aa7.97□□□□□ -1.13
SYNE2-210ENST00000553455 MEGF11A6BM72 1044 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 TMPRSS2O15393 492 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 KLF4O43474 513 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 HTR3BO95264 441 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 ELNP15502 786 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 EIF6P56537 245 aaKnown RBP7.96□□□□□ -1.14
SYNE2-210ENST00000553455 HNRNPUQ00839 825 aaKnown RBP eCLIP7.96□□□□□ -1.14
SYNE2-210ENST00000553455 ANKS3Q6ZW76 656 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 ACAD11Q709F0 780 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.96□□□□□ -1.14
SYNE2-210ENST00000553455 C12orf40Q86WS4 652 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 LSRQ86X29 649 aaPredicted RBP7.96□□□□□ -1.14
SYNE2-210ENST00000553455 RBBP8NLQ8NC74 664 aaPredicted RBP7.96□□□□□ -1.14
SYNE2-210ENST00000553455 ELMO3Q96BJ8 720 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 RUSC1Q9BVN2 902 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 CSADQ9Y600 493 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 TACC3Q9Y6A5 838 aa7.96□□□□□ -1.14
SYNE2-210ENST00000553455 SPDYE3A6NKU9 549 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 IMPDH2P12268 514 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 NTF4P34130 210 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 ERVK-24P63145 666 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 ID3Q02535 119 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 TRIM28Q13263 835 aaKnown RBP7.95□□□□□ -1.14
SYNE2-210ENST00000553455 SERINC3Q13530 473 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 CCDC144BQ3MJ40 725 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 FBXW10Q5XX13 1052 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 CKAP2LQ8IYA6 745 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 HNRNPLLQ8WVV9 542 aaKnown RBP7.95□□□□□ -1.14
SYNE2-210ENST00000553455 ANTXR1Q9H6X2 564 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 CRIM1Q9NZV1 1036 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 HIF3AQ9Y2N7 669 aa7.95□□□□□ -1.14
SYNE2-210ENST00000553455 SHROOM4Q9ULL8 1493 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 PRAMEF27A3QJZ7 478 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 MEIS3P2A8K0S8 358 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 SMAD7O15105 426 aaKnown RBP7.94□□□□□ -1.14
SYNE2-210ENST00000553455 DNAJA2O60884 412 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 SLFN14P0C7P3 912 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 AKAP4Q5JQC9 854 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 SOGA3Q5TF21 947 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 NBPF6Q5VWK0 638 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 IGF2-ASQ6U949 168 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 SMG8Q8ND04 991 aaKnown RBP7.94□□□□□ -1.14
SYNE2-210ENST00000553455 NBPF4Q96M43 638 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 MRPL18Q9H0U6 180 aaKnown RBP7.94□□□□□ -1.14
SYNE2-210ENST00000553455 RNF208Q9H0X6 261 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 SUGCTQ9HAC7 445 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 REV1Q9UBZ9 1251 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 CNTNAP5Q8WYK1 1306 aa7.94□□□□□ -1.14
SYNE2-210ENST00000553455 PIK3R2O00459 728 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 TIAF1O95411 115 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 ADH5P11766 374 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 PPM1JQ5JR12 505 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 SHISA2Q6UWI4 295 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 OR6P1Q8NGX9 317 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 OSBPL2Q9H1P3 480 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 PIF1Q9H611 641 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 DISC1Q9NRI5 854 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 RAD18Q9NS91 495 aa7.93□□□□□ -1.14
SYNE2-210ENST00000553455 GRK4P32298 578 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 RAB33AQ14088 237 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 GRIK4Q16099 956 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 TNNI3KQ59H18 835 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 TMEM201Q5SNT2 666 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 ZBTB37Q5TC79 503 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms