RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 MYO6Q9UM54 1294 aa11.59□□□□□ -0.55
SMARCC2-209ENST00000550164 SYNRGQ9UMZ2 1314 aa11.58□□□□□ -0.55
SMARCC2-209ENST00000550164 ERLIN2O94905 339 aa11.58□□□□□ -0.55
SMARCC2-209ENST00000550164 KRT9P35527 623 aa11.58□□□□□ -0.55
SMARCC2-209ENST00000550164 CMTR1Q8N1G2 835 aaKnown RBP11.58□□□□□ -0.55
SMARCC2-209ENST00000550164 GOLPH3LQ9H4A5 285 aa11.58□□□□□ -0.55
SMARCC2-209ENST00000550164 CHD1O14646 1710 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 KRT2P35908 639 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 KIF5AQ12840 1032 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 VAT1LQ9HCJ6 419 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 SEPT11Q9NVA2 429 aaKnown RBP11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 SARM1Q6SZW1 724 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 PYM1Q9BRP8 204 aaKnown RBP11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 ARMT1Q9H993 441 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 BTBD18B2RXH4 712 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 MAATS1Q7Z4T9 603 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 CCDC42Q96M95 316 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 TAB2Q9NYJ8 693 aa11.58□□□□□ -0.56
SMARCC2-209ENST00000550164 MACROD2A1Z1Q3 448 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 KRT83P78385 493 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 EPHA10Q5JZY3 1008 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 AIFM3Q96NN9 605 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 MMRN2Q9H8L6 949 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 EXOC1Q9NV70 894 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 STX8Q9UNK0 236 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 TTF2Q9UNY4 1162 aaKnown RBP11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 MAST3O60307 1309 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 NEO1Q92859 1461 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 EBAG9O00559 213 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 PNMA6AP0CW24 399 aaPredicted RBP11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 KIF5BP33176 963 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 TUBB4BP68371 445 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 PTPN12Q05209 780 aaKnown RBP11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 SLC39A14Q15043 492 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 TTC31Q49AM3 519 aaPredicted RBP11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 TTLL7Q6ZT98 887 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 POLR3EQ9NVU0 708 aa11.57□□□□□ -0.56
SMARCC2-209ENST00000550164 HSF2BPO75031 334 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 DEXIO95424 95 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 ASIC1P78348 528 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 DZIP1Q86YF9 867 aaKnown RBP11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 ZNF444Q8N0Y2 327 aaPredicted RBP11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 PUS3Q9BZE2 481 aaKnown RBP11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 KAT14Q9H8E8 782 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 SEC63Q9UGP8 760 aaKnown RBP11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 TAF6LQ9Y6J9 622 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 V9GY48 417 aaPredicted RBP11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 ZNF532Q9HCE3 1301 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 AP5Z1O43299 807 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 ZEB2O60315 1214 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 TACC1O75410 805 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 PRDM1O75626 825 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 TUBBP07437 444 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 ITGA6P23229 1130 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 CCDC40Q4G0X9 1142 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 ZFYVE27Q5T4F4 411 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 GPIHBP1Q8IV16 184 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 TEX13AQ9BXU3 409 aaPredicted RBP11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 REREQ9P2R6 1566 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 CRB1P82279 1406 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 FAM114A1Q8IWE2 563 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 CCDC43Q96MW1 224 aaKnown RBP11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 TSG101Q99816 390 aa11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 SETD1BQ9UPS6 1966 aaKnown RBP11.56□□□□□ -0.56
SMARCC2-209ENST00000550164 PPRC1Q5VV67 1664 aaKnown RBP11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 NOP2P46087 812 aaKnown RBP11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 NOSTRINQ8IVI9 506 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 ARHGEF40Q8TER5 1519 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 TMCO5BA8MYB1 307 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 CHGBP05060 677 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 TMTC1Q8IUR5 882 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 CALML4Q96GE6 196 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 NAA15Q9BXJ9 866 aaKnown RBP11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 BLZF1Q9H2G9 400 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 FGFR1OPO95684 399 aaKnown RBP11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 ADORA1P30542 326 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 KIF23Q02241 960 aaPredicted RBP11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 CYP26C1Q6V0L0 522 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 ATRIPQ8WXE1 791 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 ANKRD7Q92527 254 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 HECW2Q9P2P5 1572 aa11.55□□□□□ -0.56
SMARCC2-209ENST00000550164 IKBKBO14920 756 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 STX10O60499 249 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 IGKV5-2P06315 115 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 AMPD3Q01432 767 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 PDE4BQ07343 736 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 IFFO1Q0D2I5 559 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 BRD3Q15059 726 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 FAM76AQ8TAV0 307 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 AFAP1L1Q8TED9 768 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 OSBP2Q969R2 916 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 CCDC113Q9H0I3 377 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 PDE11AQ9HCR9 933 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 ST7Q9NRC1 585 aa11.54□□□□□ -0.56
SMARCC2-209ENST00000550164 VPS54Q9P1Q0 977 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms