RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 AKAP2Q9Y2D5 859 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 ZHX2Q9Y6X8 837 aa16.83■□□□□ 0.28
TROAP-211ENST00000549891 ATRNL1Q5VV63 1379 aa16.82■□□□□ 0.28
TROAP-211ENST00000549891 ZFPM1Q8IX07 1006 aa16.82■□□□□ 0.28
TROAP-211ENST00000549891 FAM163AQ96GL9 167 aaPredicted RBP16.82■□□□□ 0.28
TROAP-211ENST00000549891 SLC45A1Q9Y2W3 748 aa16.82■□□□□ 0.28
TROAP-211ENST00000549891 A0A0G2JLL6 359 aaPredicted RBP16.81■□□□□ 0.28
TROAP-211ENST00000549891 PHF20L1A8MW92 1017 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 GNAI3P08754 354 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 BCRP11274 1271 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 PTPRAP18433 802 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 CTGFP29279 349 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 ADORA1P30542 326 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 UBXN2AP68543 259 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 RASGRF1Q13972 1273 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 MVPQ14764 893 aaKnown RBP16.81■□□□□ 0.28
TROAP-211ENST00000549891 GPAT2Q6NUI2 795 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 PRRT2Q7Z6L0 340 aaPredicted RBP16.81■□□□□ 0.28
TROAP-211ENST00000549891 BIN2Q9UBW5 565 aaPredicted RBP16.81■□□□□ 0.28
TROAP-211ENST00000549891 PHIPQ8WWQ0 1821 aa16.81■□□□□ 0.28
TROAP-211ENST00000549891 RFX7Q2KHR2 1363 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 CTNND1O60716 968 aaKnown RBP16.8■□□□□ 0.28
TROAP-211ENST00000549891 CYP2C8P10632 490 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 BTDP43251 543 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 TIMM10P62072 90 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 MAP3K10Q02779 954 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 MTFR1Q15390 333 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 SLAIN1Q8ND83 568 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 ARHGAP45Q92619 1136 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 MEIS3Q99687 375 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 AFG3L2Q9Y4W6 797 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 CEP290O15078 2479 aa16.8■□□□□ 0.28
TROAP-211ENST00000549891 MROH7-TTC4A0A0A0MT08 1334 aa16.79■□□□□ 0.28
TROAP-211ENST00000549891 A0A1B0GUL7 405 aa16.79■□□□□ 0.28
TROAP-211ENST00000549891 SRGAP3O43295 1099 aa16.79■□□□□ 0.28
TROAP-211ENST00000549891 GJB1P08034 283 aa16.79■□□□□ 0.28
TROAP-211ENST00000549891 PICALMQ13492 652 aa16.79■□□□□ 0.28
TROAP-211ENST00000549891 GADL1Q6ZQY3 521 aa16.79■□□□□ 0.28
TROAP-211ENST00000549891 ERICH6Q7L0X2 663 aa16.79■□□□□ 0.28
TROAP-211ENST00000549891 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
TROAP-211ENST00000549891 COLQQ9Y215 455 aaPredicted RBP16.79■□□□□ 0.28
TROAP-211ENST00000549891 DDTLA6NHG4 134 aaPredicted RBP16.78■□□□□ 0.28
TROAP-211ENST00000549891 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
TROAP-211ENST00000549891 CCL5P13501 91 aa16.78■□□□□ 0.28
TROAP-211ENST00000549891 GJA8P48165 433 aa16.78■□□□□ 0.28
TROAP-211ENST00000549891 FXR1P51114 621 aaKnown RBP eCLIP16.78■□□□□ 0.28
TROAP-211ENST00000549891 GSTO1P78417 241 aa16.78■□□□□ 0.28
TROAP-211ENST00000549891 PRKCZQ05513 592 aa16.78■□□□□ 0.28
TROAP-211ENST00000549891 SH3BP5LQ7L8J4 393 aa16.78■□□□□ 0.28
TROAP-211ENST00000549891 SMCR8Q8TEV9 937 aaPredicted RBP16.78■□□□□ 0.28
TROAP-211ENST00000549891 HTATIP2Q9BUP3 242 aa16.78■□□□□ 0.28
TROAP-211ENST00000549891 RNF208Q9H0X6 261 aa16.78■□□□□ 0.28
TROAP-211ENST00000549891 ATAD5Q96QE3 1844 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 GPR75-ASB3A0A0A6YYF3 556 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 H0YGN5 161 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
TROAP-211ENST00000549891 LDHCP07864 332 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 CAPN2P17655 700 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 MECOMQ03112 1051 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 TFCP2Q12800 502 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 MTX1Q13505 466 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 GORABQ5T7V8 394 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 DPF3Q92784 378 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 SHISA4Q96DD7 197 aa16.77■□□□□ 0.28
TROAP-211ENST00000549891 DDX4Q9NQI0 724 aaKnown RBP16.77■□□□□ 0.28
TROAP-211ENST00000549891 TRIM75PA6NK02 468 aa16.76■□□□□ 0.27
TROAP-211ENST00000549891 IPO8O15397 1037 aaKnown RBP16.76■□□□□ 0.27
TROAP-211ENST00000549891 TBC1D12O60347 775 aa16.76■□□□□ 0.27
TROAP-211ENST00000549891 RARSP54136 660 aaKnown RBP16.76■□□□□ 0.27
TROAP-211ENST00000549891 NEUROD6Q96NK8 337 aa16.76■□□□□ 0.27
TROAP-211ENST00000549891 PNMA3Q9UL41 463 aa16.76■□□□□ 0.27
TROAP-211ENST00000549891 COL2A1P02458 1487 aaPredicted RBP16.75■□□□□ 0.27
TROAP-211ENST00000549891 TNPO2O14787 897 aaKnown RBP16.75■□□□□ 0.27
TROAP-211ENST00000549891 ADCY3O60266 1144 aa16.75■□□□□ 0.27
TROAP-211ENST00000549891 SPATA5Q8NB90 893 aa16.75■□□□□ 0.27
TROAP-211ENST00000549891 PXYLP1Q8TE99 480 aa16.75■□□□□ 0.27
TROAP-211ENST00000549891 TBC1D2Q9BYX2 928 aa16.75■□□□□ 0.27
TROAP-211ENST00000549891 OSBPL5Q9H0X9 879 aaPredicted RBP16.75■□□□□ 0.27
TROAP-211ENST00000549891 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.75■□□□□ 0.27
TROAP-211ENST00000549891 GABRQQ9UN88 632 aa16.75■□□□□ 0.27
TROAP-211ENST00000549891 AGTPBP1Q9UPW5 1226 aa16.75■□□□□ 0.27
TROAP-211ENST00000549891 DOCK3Q8IZD9 2030 aa16.75■□□□□ 0.27
TROAP-211ENST00000549891 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
TROAP-211ENST00000549891 FLT3LGP49771 235 aa16.74■□□□□ 0.27
TROAP-211ENST00000549891 RHBDL3P58872 404 aa16.74■□□□□ 0.27
TROAP-211ENST00000549891 IRF5Q13568 498 aa16.74■□□□□ 0.27
TROAP-211ENST00000549891 COA7Q96BR5 231 aa16.74■□□□□ 0.27
TROAP-211ENST00000549891 HMG20BQ9P0W2 317 aa16.74■□□□□ 0.27
TROAP-211ENST00000549891 GNAI2P04899 355 aa16.73■□□□□ 0.27
TROAP-211ENST00000549891 G3BP1Q13283 466 aaKnown RBP eCLIP16.73■□□□□ 0.27
TROAP-211ENST00000549891 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.271e-9■□□□□ 11
TROAP-211ENST00000549891 PROCA1Q8NCQ7 364 aaPredicted RBP16.73■□□□□ 0.27
TROAP-211ENST00000549891 U2AF1L4Q8WU68 220 aaKnown RBP16.73■□□□□ 0.27
TROAP-211ENST00000549891 NSUN4Q96CB9 384 aaKnown RBP16.73■□□□□ 0.27
TROAP-211ENST00000549891 NOL10Q9BSC4 688 aaKnown RBP16.73■□□□□ 0.27
TROAP-211ENST00000549891 RAI14Q9P0K7 980 aa16.73■□□□□ 0.27
TROAP-211ENST00000549891 NR2E3Q9Y5X4 410 aa16.73■□□□□ 0.27
TROAP-211ENST00000549891 TRIOBPQ9H2D6 2365 aa16.72■□□□□ 0.27
TROAP-211ENST00000549891 SGPL1O95470 568 aa16.72■□□□□ 0.27
TROAP-211ENST00000549891 UQCRFS1P1P0C7P4 283 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms