RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 GAS2L3Q86XJ1 694 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 MICAL1Q8TDZ2 1067 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 ZNF652Q9Y2D9 606 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 COL16A1Q07092 1604 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 BUB1BO60566 1050 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 ZSCAN22P10073 491 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 PRPF40BQ6NWY9 871 aaKnown RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 CCDC8Q9H0W5 538 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 NRAPQ86VF7 1730 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 KIF5CO60282 957 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 RPS6KB1P23443 525 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 KIF5BP33176 963 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 NT5C2P49902 561 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 IFFO1Q0D2I5 559 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 SAFBQ15424 915 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 CCAR1Q8IX12 1150 aaKnown RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 RPGRIP1Q96KN7 1286 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 NCAPGQ9BPX3 1015 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 PAG1Q9NWQ8 432 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 DBNLQ9UJU6 430 aaKnown RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 PALD1Q9ULE6 856 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 SLC27A2O14975 620 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 FAM160A1Q05DH4 1040 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 KLHL10Q6JEL2 608 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 CCDC121Q6ZUS5 278 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 NUCKS1Q9H1E3 243 aaKnown RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 MROH5Q6ZUA9 1318 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 DYTNA2CJ06 578 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 RNF113AO15541 343 aaKnown RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 AK2P54819 239 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 GNG11P61952 73 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 PIP4K2BP78356 416 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 CCDC40Q4G0X9 1142 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 FBXL16Q8N461 479 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 JPH2Q9BR39 696 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-214ENST00000540109 SIL1Q9H173 461 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 LMBRD1Q9NUN5 540 aa6.87□□□□□ -1.31
PTPRD-214ENST00000540109 RAD51AP2Q09MP3 1159 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 CFAP100Q494V2 611 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 CACNA2D4Q7Z3S7 1137 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 TMC6Q7Z403 805 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 BOLA2Q9H3K6 86 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 ITGB4P16144 1822 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 PHLPP1O60346 1717 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 LRP5O75197 1615 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 MYO1CO00159 1063 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 STX6O43752 255 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 ZEB2O60315 1214 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 IFIT1P09914 478 aaKnown RBP6.86□□□□□ -1.31
PTPRD-214ENST00000540109 TTC39AQ5SRH9 613 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 ARL10Q8N8L6 244 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 CCDC160A6NGH7 325 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 PDE8AO60658 829 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 UBE2HP62256 183 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 SATB1Q01826 763 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 LMNB2Q03252 620 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 TERF2Q15554 542 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 EPHA10Q5JZY3 1008 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 TAF5LO75529 589 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 ZMYM1Q5SVZ6 1142 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 GOLGA5Q8TBA6 731 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 N4BP2L2Q92802 583 aaPredicted RBP6.86□□□□□ -1.31
PTPRD-214ENST00000540109 ZMYM6O95789 1325 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 LTBP4Q8N2S1 1624 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 SEPT6Q14141 434 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 C6orf163Q5TEZ5 329 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 MCTP2Q6DN12 878 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 FAM200AQ8TCP9 573 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 PIGBQ92521 554 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 DTNBP1Q96EV8 351 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 CAPN7Q9Y6W3 813 aa6.86□□□□□ -1.31
PTPRD-214ENST00000540109 ATRNO75882 1429 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 ATP5J2-PTCD1G3V325 749 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 TOM1O60784 492 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 PTCD1O75127 700 aaKnown RBP6.85□□□□□ -1.31
PTPRD-214ENST00000540109 SLFNL1Q499Z3 407 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 ATG9AQ7Z3C6 839 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 CCDC12Q8WUD4 166 aaPredicted RBP6.85□□□□□ -1.31
PTPRD-214ENST00000540109 NEK1Q96PY6 1258 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 LAMB2P55268 1798 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 GCOM1H8Y6P7 765 aaPredicted RBP6.85□□□□□ -1.31
PTPRD-214ENST00000540109 RPSAP08865 295 aaKnown RBP6.85□□□□□ -1.31
PTPRD-214ENST00000540109 MYZAPP0CAP1 466 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 CYP19A1P11511 503 aaPredicted RBP6.85□□□□□ -1.31
PTPRD-214ENST00000540109 APBA1Q02410 837 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 TTLL7Q6ZT98 887 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 LMNTD2Q8IXW0 634 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPRD-214ENST00000540109 ZSCAN16Q9H4T2 348 aaPredicted RBP6.85□□□□□ -1.31
PTPRD-214ENST00000540109 ITGB1BP2Q9UKP3 347 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 TBC1D2BQ9UPU7 963 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 SPATA31A1Q5TZJ5 1347 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 MAP4K4O95819 1239 aaPredicted RBP6.85□□□□□ -1.31
PTPRD-214ENST00000540109 F13A1P00488 732 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 DDB1Q16531 1140 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 FERMT3Q86UX7 667 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 HOOK3Q86VS8 718 aa6.85□□□□□ -1.31
PTPRD-214ENST00000540109 CDC5LQ99459 802 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms