RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 NT5DC1Q5TFE4 455 aa20.13■□□□□ 0.81
RAB40C-205ENST00000539661 LEKR1Q6ZMV7 388 aa20.13■□□□□ 0.81
RAB40C-205ENST00000539661 FOXP2O15409 715 aa20.13■□□□□ 0.81
RAB40C-205ENST00000539661 FGAP02671 866 aa20.13■□□□□ 0.81
RAB40C-205ENST00000539661 BMP6P22004 513 aa20.13■□□□□ 0.81
RAB40C-205ENST00000539661 BEND6Q5SZJ8 279 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-205ENST00000539661 KRT40Q6A162 431 aa20.13■□□□□ 0.81
RAB40C-205ENST00000539661 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-205ENST00000539661 TRIML1Q8N9V2 468 aa20.13■□□□□ 0.81
RAB40C-205ENST00000539661 RAI14Q9P0K7 980 aa20.13■□□□□ 0.81
RAB40C-205ENST00000539661 CDC23Q9UJX2 597 aa20.13■□□□□ 0.81
RAB40C-205ENST00000539661 H7C1W4 665 aa20.12■□□□□ 0.81
RAB40C-205ENST00000539661 ADKP55263 362 aaKnown RBP20.12■□□□□ 0.81
RAB40C-205ENST00000539661 CPLX2Q6PUV4 134 aaKnown RBP20.12■□□□□ 0.81
RAB40C-205ENST00000539661 PLBD2Q8NHP8 589 aa20.12■□□□□ 0.81
RAB40C-205ENST00000539661 ATG3Q9NT62 314 aa20.12■□□□□ 0.81
RAB40C-205ENST00000539661 CIAO1O76071 339 aa20.12■□□□□ 0.81
RAB40C-205ENST00000539661 TUBBP07437 444 aa20.12■□□□□ 0.81
RAB40C-205ENST00000539661 CTR9Q6PD62 1173 aa20.12■□□□□ 0.81
RAB40C-205ENST00000539661 NFE2L3Q9Y4A8 694 aa20.12■□□□□ 0.81
RAB40C-205ENST00000539661 TNNT3P45378 269 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-205ENST00000539661 HAND2P61296 217 aa20.11■□□□□ 0.81
RAB40C-205ENST00000539661 ANKZF1Q9H8Y5 726 aa20.11■□□□□ 0.81
RAB40C-205ENST00000539661 MAN1B1Q9UKM7 699 aa20.11■□□□□ 0.81
RAB40C-205ENST00000539661 AKR1B15C9JRZ8 316 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-205ENST00000539661 EYA2O00167 538 aa20.11■□□□□ 0.81
RAB40C-205ENST00000539661 CDC27P30260 824 aa20.11■□□□□ 0.81
RAB40C-205ENST00000539661 NR1I3Q14994 352 aa20.11■□□□□ 0.81
RAB40C-205ENST00000539661 ZNF496Q96IT1 587 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-205ENST00000539661 RRP15Q9Y3B9 282 aaKnown RBP20.11■□□□□ 0.81
RAB40C-205ENST00000539661 KDM6AO15550 1401 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-205ENST00000539661 ATP5J2-PTCD1G3V325 749 aa20.1■□□□□ 0.81
RAB40C-205ENST00000539661 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
RAB40C-205ENST00000539661 CT47A1Q5JQC4 288 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-205ENST00000539661 KRI1Q8N9T8 703 aaKnown RBP20.1■□□□□ 0.81
RAB40C-205ENST00000539661 MRPL44Q9H9J2 332 aaKnown RBP20.1■□□□□ 0.81
RAB40C-205ENST00000539661 KIF1AQ12756 1690 aa20.1■□□□□ 0.81
RAB40C-205ENST00000539661 A0A1B0GUL7 405 aa20.1■□□□□ 0.81
RAB40C-205ENST00000539661 ZNF213O14771 459 aa20.1■□□□□ 0.81
RAB40C-205ENST00000539661 KIF5CO60282 957 aa20.1■□□□□ 0.81
RAB40C-205ENST00000539661 PIP4K2AP48426 406 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-205ENST00000539661 SARSP49591 514 aaKnown RBP20.1■□□□□ 0.81
RAB40C-205ENST00000539661 PTPN21Q16825 1174 aa20.1■□□□□ 0.81
RAB40C-205ENST00000539661 TTC39AQ5SRH9 613 aa20.1■□□□□ 0.81
RAB40C-205ENST00000539661 CLIC6Q96NY7 704 aa20.1■□□□□ 0.81
RAB40C-205ENST00000539661 GBP3Q9H0R5 595 aa20.1■□□□□ 0.81
RAB40C-205ENST00000539661 ANGEL1Q9UNK9 670 aaKnown RBP20.1■□□□□ 0.81
RAB40C-205ENST00000539661 METAP2P50579 478 aaKnown RBP eCLIP20.09■□□□□ 0.81
RAB40C-205ENST00000539661 KARSQ15046 597 aaKnown RBP20.09■□□□□ 0.81
RAB40C-205ENST00000539661 POSTNQ15063 836 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 NOM1Q5C9Z4 860 aaKnown RBP20.09■□□□□ 0.81
RAB40C-205ENST00000539661 APPBP2Q92624 585 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 PDE11AQ9HCR9 933 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 RSPH14Q9UHP6 348 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 L1RE1Q9UN81 338 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 ABCC12Q96J65 1359 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 A0A1B0GTH6 734 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 GYS2P54840 703 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 TRIM29Q14134 588 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 MORC3Q14149 939 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 DESI2Q9BSY9 194 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 LCMT1Q9UIC8 334 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 ADGRG1Q9Y653 693 aa20.09■□□□□ 0.81
RAB40C-205ENST00000539661 ERCC5P28715 1186 aaPredicted RBP20.08■□□□□ 0.81
RAB40C-205ENST00000539661 WASHC4Q2M389 1173 aa20.08■□□□□ 0.81
RAB40C-205ENST00000539661 C10orf67Q8IYJ2 551 aa20.08■□□□□ 0.81
RAB40C-205ENST00000539661 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.08■□□□□ 0.81
RAB40C-205ENST00000539661 VPS18Q9P253 973 aa20.08■□□□□ 0.81
RAB40C-205ENST00000539661 FMR1Q06787 632 aaKnown RBP eCLIP20.08■□□□□ 0.8
RAB40C-205ENST00000539661 TRDNQ13061 729 aa20.08■□□□□ 0.8
RAB40C-205ENST00000539661 GOLGA6L1Q8N7Z2 621 aa20.08■□□□□ 0.8
RAB40C-205ENST00000539661 PLEKHG2Q9H7P9 1386 aa20.08■□□□□ 0.8
RAB40C-205ENST00000539661 ECM29Q5VYK3 1845 aa20.08■□□□□ 0.8
RAB40C-205ENST00000539661 KANK3Q6NY19 840 aa20.07■□□□□ 0.8
RAB40C-205ENST00000539661 RAB11FIP4Q86YS3 637 aa20.07■□□□□ 0.8
RAB40C-205ENST00000539661 AIFM3Q96NN9 605 aa20.07■□□□□ 0.8
RAB40C-205ENST00000539661 MKRN1Q9UHC7 482 aaKnown RBP20.07■□□□□ 0.8
RAB40C-205ENST00000539661 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
RAB40C-205ENST00000539661 LAMB4A4D0S4 1761 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 STK36Q9NRP7 1315 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 TRIM66O15016 1216 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 PLCD1P51178 756 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 FKBP4Q02790 459 aaKnown RBP eCLIP20.06■□□□□ 0.8
RAB40C-205ENST00000539661 MCM6Q14566 821 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 RASGRP2Q7LDG7 609 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 FAM71BQ8TC56 605 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 ACBD3Q9H3P7 528 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 SH2B2O14492 632 aaPredicted RBP20.06■□□□□ 0.8
RAB40C-205ENST00000539661 PPFIBP1Q86W92 1011 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 DNAJC5Q9H3Z4 198 aa20.06■□□□□ 0.8
RAB40C-205ENST00000539661 CTAGE9A4FU28 777 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 SOWAHDA6NJG2 315 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 PHKG2P15735 406 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 NOP2P46087 812 aaKnown RBP20.05■□□□□ 0.8
RAB40C-205ENST00000539661 WHAMMP3Q1A5X7 153 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 LRRC24Q50LG9 513 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 ZNF579Q8NAF0 562 aaKnown RBP20.05■□□□□ 0.8
RAB40C-205ENST00000539661 CCDC51Q96ER9 411 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 PNKPQ96T60 521 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 CWC25Q9NXE8 425 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms