RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GTF2IP78347 998 aa20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 WDR33Q9C0J8 1336 aaKnown RBP20.02■□□□□ 0.8
PCDHB17P-201ENST00000539533 BAZ2AQ9UIF9 1905 aaKnown RBP20.02■□□□□ 0.79
PCDHB17P-201ENST00000539533 EVCP57679 992 aa20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 RRP12Q5JTH9 1297 aaKnown RBP20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 TMED8Q6PL24 325 aaPredicted RBP20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 STAG1Q8WVM7 1258 aa20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 ZNF274Q96GC6 653 aaPredicted RBP20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 CRNKL1Q9BZJ0 848 aaKnown RBP20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 TSPY26PQ9H489 355 aa20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 NCOA5Q9HCD5 579 aaKnown RBP20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 ZSWIM5Q9P217 1185 aa20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 WDR19Q8NEZ3 1342 aa20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 KDM4AO75164 1064 aa20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 CNKSR1Q969H4 720 aa20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 SYAP1Q96A49 352 aaPredicted RBP20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 DCP1AQ9NPI6 582 aaPredicted RBP20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 TOMM22Q9NS69 142 aa20.01■□□□□ 0.79
PCDHB17P-201ENST00000539533 CTR9Q6PD62 1173 aa20■□□□□ 0.79
PCDHB17P-201ENST00000539533 USP17L12C9JPN9 530 aa20■□□□□ 0.79
PCDHB17P-201ENST00000539533 USP17L21D6R901 530 aa20■□□□□ 0.79
PCDHB17P-201ENST00000539533 GSTO1P78417 241 aa20■□□□□ 0.79
PCDHB17P-201ENST00000539533 EVX2Q03828 476 aa20■□□□□ 0.79
PCDHB17P-201ENST00000539533 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
PCDHB17P-201ENST00000539533 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
PCDHB17P-201ENST00000539533 FAM205AQ6ZU69 1335 aa20■□□□□ 0.79
PCDHB17P-201ENST00000539533 TIAM2Q8IVF5 1701 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 KLF18A0A0U1RQI7 1052 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 ZSCAN22P10073 491 aaPredicted RBP19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 CSPP1Q1MSJ5 1256 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 GIMAP6Q6P9H5 292 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 RAB11FIP4Q86YS3 637 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 SLC16A10Q8TF71 515 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 FBXW7Q969H0 707 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 MAP7D2Q96T17 732 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 KRT23Q9C075 422 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 CNNM2Q9H8M5 875 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 SENP2Q9HC62 589 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 ANAPC4Q9UJX5 808 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 IGSF3O75054 1194 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 CTDNEP1O95476 244 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 LARP1BQ659C4 914 aaKnown RBP19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 CCDC125Q86Z20 511 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 IGDCC4Q8TDY8 1250 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 SH3RF3Q8TEJ3 882 aaPredicted RBP19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 TBC1D22AQ8WUA7 517 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 C7orf43Q8WVR3 580 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 DDX11Q96FC9 970 aa19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 ANGEL1Q9UNK9 670 aaKnown RBP19.99■□□□□ 0.79
PCDHB17P-201ENST00000539533 MROH7-TTC4A0A0A0MT08 1334 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 SH2B2O14492 632 aaPredicted RBP19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 ATP8A2Q9NTI2 1148 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 MTMR6Q9Y217 621 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 KIAA1551Q9HCM1 1747 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 MYH2Q9UKX2 1941 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 PPFIA3O75145 1194 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 LDHCP07864 332 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 NSUN7Q8NE18 718 aaKnown RBP19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 EYA3Q99504 573 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 MXD3Q9BW11 206 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 RTFDC1Q9BY42 306 aaPredicted RBP19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 HPS5Q9UPZ3 1129 aa19.98■□□□□ 0.79
PCDHB17P-201ENST00000539533 G3V3G9 751 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 DCAF8Q5TAQ9 597 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 ZKSCAN3Q9BRR0 538 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 RNF41Q9H4P4 317 aaPredicted RBP19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 DBNDD1Q9H9R9 158 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 C10orf71Q711Q0 1435 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 VPS37CA5D8V6 355 aaPredicted RBP19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 ZBTB7AO95365 584 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 BAG3O95817 575 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 PPP4CP60510 307 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 SMARCC2Q8TAQ2 1214 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 TMEM87BQ96K49 555 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 GDPD2Q9HCC8 539 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 KCNQ5Q9NR82 932 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 PRDM4Q9UKN5 801 aa19.97■□□□□ 0.79
PCDHB17P-201ENST00000539533 UQCRHLA0A096LP55 91 aa19.96■□□□□ 0.79
PCDHB17P-201ENST00000539533 GOLGA8BA8MQT2 603 aa19.96■□□□□ 0.79
PCDHB17P-201ENST00000539533 GADD45BO75293 160 aaPredicted RBP19.96■□□□□ 0.79
PCDHB17P-201ENST00000539533 UQCRHP07919 91 aa19.96■□□□□ 0.79
PCDHB17P-201ENST00000539533 CYP2D6P10635 497 aa19.96■□□□□ 0.79
PCDHB17P-201ENST00000539533 TMEM67Q5HYA8 995 aa19.96■□□□□ 0.79
PCDHB17P-201ENST00000539533 CERS5Q8N5B7 392 aa19.96■□□□□ 0.79
PCDHB17P-201ENST00000539533 SLC4A8Q2Y0W8 1093 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 USP48Q86UV5 1035 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 LLPHQ9BRT6 129 aaKnown RBP19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 LY9Q9HBG7 655 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 F8W031 263 aaPredicted RBP19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 IFIT3O14879 490 aaKnown RBP19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 C21orf2O43822 256 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 PRDM1O75626 825 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 F13A1P00488 732 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 USP17L8P0C7I0 530 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 BTDP43251 543 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 USP5P45974 858 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 NOL10Q9BSC4 688 aaKnown RBP19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 MCM9Q9NXL9 1143 aa19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 MKRN1Q9UHC7 482 aaKnown RBP19.95■□□□□ 0.78
PCDHB17P-201ENST00000539533 GPR75-ASB3A0A0A6YYF3 556 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms