RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 LAMB1P07942 1786 aa24.49■■□□□ 1.51
COPS7A-208ENST00000538410 TRPM7Q96QT4 1865 aa24.49■■□□□ 1.51
COPS7A-208ENST00000538410 HDLBPQ00341 1268 aaKnown RBP24.49■■□□□ 1.51
COPS7A-208ENST00000538410 SDR42E1Q8WUS8 393 aa24.49■■□□□ 1.51
COPS7A-208ENST00000538410 TEKT1Q969V4 418 aa24.49■■□□□ 1.51
COPS7A-208ENST00000538410 NAPBQ9H115 298 aa24.49■■□□□ 1.51
COPS7A-208ENST00000538410 PGAP2Q9UHJ9 254 aa24.49■■□□□ 1.51
COPS7A-208ENST00000538410 IMMTQ16891 758 aaKnown RBP24.48■■□□□ 1.51
COPS7A-208ENST00000538410 SAMD7Q7Z3H4 446 aa24.48■■□□□ 1.51
COPS7A-208ENST00000538410 DDRGK1Q96HY6 314 aa24.48■■□□□ 1.51
COPS7A-208ENST00000538410 TAF6LQ9Y6J9 622 aa24.48■■□□□ 1.51
COPS7A-208ENST00000538410 PLCG2P16885 1265 aa24.47■■□□□ 1.51
COPS7A-208ENST00000538410 GIMAP6Q6P9H5 292 aa24.47■■□□□ 1.51
COPS7A-208ENST00000538410 SH3RF3Q8TEJ3 882 aaPredicted RBP24.47■■□□□ 1.51
COPS7A-208ENST00000538410 GMLQ99445 158 aa24.47■■□□□ 1.51
COPS7A-208ENST00000538410 MYH1P12882 1939 aa24.47■■□□□ 1.51
COPS7A-208ENST00000538410 CRKP46108 304 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 TDO2P48775 406 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 KRT32Q14532 448 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 ADCK5Q3MIX3 580 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 TM6SF1Q9BZW5 370 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 TRAF5O00463 557 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 ZNF213O14771 459 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 FMR1Q06787 632 aaKnown RBP eCLIP24.46■■□□□ 1.51
COPS7A-208ENST00000538410 TBC1D10BQ4KMP7 808 aaPredicted RBP24.46■■□□□ 1.51
COPS7A-208ENST00000538410 AGBL3Q8NEM8 1001 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 ATP8A2Q9NTI2 1148 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 SERPINA10Q9UK55 444 aa24.46■■□□□ 1.51
COPS7A-208ENST00000538410 CNTNAP1P78357 1384 aa24.45■■□□□ 1.51
COPS7A-208ENST00000538410 RBM26Q5T8P6 1007 aaKnown RBP24.45■■□□□ 1.5
COPS7A-208ENST00000538410 ZDHHC15Q96MV8 337 aa24.45■■□□□ 1.5
COPS7A-208ENST00000538410 JAKMIP1Q96N16 626 aaKnown RBP24.45■■□□□ 1.5
COPS7A-208ENST00000538410 DDX60LQ5H9U9 1706 aaKnown RBP24.44■■□□□ 1.5
COPS7A-208ENST00000538410 RHBDL3P58872 404 aa24.44■■□□□ 1.5
COPS7A-208ENST00000538410 HAND2P61296 217 aa24.44■■□□□ 1.5
COPS7A-208ENST00000538410 PSMA5P28066 241 aa24.43■■□□□ 1.5
COPS7A-208ENST00000538410 CDC37L1Q7L3B6 337 aa24.43■■□□□ 1.5
COPS7A-208ENST00000538410 GLIS2Q9BZE0 524 aaPredicted RBP24.43■■□□□ 1.5
COPS7A-208ENST00000538410 DCP1AQ9NPI6 582 aaPredicted RBP24.43■■□□□ 1.5
COPS7A-208ENST00000538410 ABT1Q9ULW3 272 aaKnown RBP24.43■■□□□ 1.5
COPS7A-208ENST00000538410 POLR2AP24928 1970 aaKnown RBP24.43■■□□□ 1.5
COPS7A-208ENST00000538410 EGFRP00533 1210 aa24.43■■□□□ 1.5
COPS7A-208ENST00000538410 NEK4P51957 841 aa24.43■■□□□ 1.5
COPS7A-208ENST00000538410 APOBEC3HQ6NTF7 200 aaKnown RBP24.43■■□□□ 1.5
COPS7A-208ENST00000538410 STOX1Q6ZVD7 989 aa24.43■■□□□ 1.5
COPS7A-208ENST00000538410 TEX11Q8IYF3 940 aa24.43■■□□□ 1.5
COPS7A-208ENST00000538410 IL27Q8NEV9 243 aa24.43■■□□□ 1.5
COPS7A-208ENST00000538410 UPF3BQ9BZI7 483 aaKnown RBP24.43■■□□□ 1.5
COPS7A-208ENST00000538410 ZSWIM6Q9HCJ5 1215 aa24.43■■□□□ 1.5
COPS7A-208ENST00000538410 E7EWF7 191 aa24.42■■□□□ 1.5
COPS7A-208ENST00000538410 CASTP20810 708 aaKnown RBP24.42■■□□□ 1.5
COPS7A-208ENST00000538410 USP5P45974 858 aa24.42■■□□□ 1.5
COPS7A-208ENST00000538410 KIF4BQ2VIQ3 1234 aa24.42■■□□□ 1.5
COPS7A-208ENST00000538410 SNX21Q969T3 373 aa24.42■■□□□ 1.5
COPS7A-208ENST00000538410 HDAC9Q9UKV0 1011 aa24.42■■□□□ 1.5
COPS7A-208ENST00000538410 RBM5P52756 815 aaKnown RBP eCLIP24.41■■□□□ 1.5
COPS7A-208ENST00000538410 DEFB115Q30KQ5 88 aa24.41■■□□□ 1.5
COPS7A-208ENST00000538410 TGFBRAP1Q8WUH2 860 aa24.41■■□□□ 1.5
COPS7A-208ENST00000538410 IPO9Q96P70 1041 aaKnown RBP24.41■■□□□ 1.5
COPS7A-208ENST00000538410 NBPF3Q9H094 633 aa24.41■■□□□ 1.5
COPS7A-208ENST00000538410 ST18O60284 1047 aa24.4■■□□□ 1.5
COPS7A-208ENST00000538410 ZNF280AP59817 542 aaPredicted RBP24.4■■□□□ 1.5
COPS7A-208ENST00000538410 CFAP100Q494V2 611 aa24.4■■□□□ 1.5
COPS7A-208ENST00000538410 CST9Q5W186 159 aa24.4■■□□□ 1.5
COPS7A-208ENST00000538410 NEK1Q96PY6 1258 aa24.4■■□□□ 1.5
COPS7A-208ENST00000538410 USP40Q9NVE5 1235 aa24.4■■□□□ 1.5
COPS7A-208ENST00000538410 CYP46A1Q9Y6A2 500 aa24.4■■□□□ 1.5
COPS7A-208ENST00000538410 RASSF10A6NK89 507 aa24.39■■□□□ 1.5
COPS7A-208ENST00000538410 USP17L8P0C7I0 530 aa24.39■■□□□ 1.5
COPS7A-208ENST00000538410 BECN1Q14457 450 aa24.39■■□□□ 1.5
COPS7A-208ENST00000538410 CDC42EP5Q6NZY7 148 aa24.39■■□□□ 1.5
COPS7A-208ENST00000538410 CTR9Q6PD62 1173 aa24.39■■□□□ 1.5
COPS7A-208ENST00000538410 RUFY3Q7L099 469 aa24.39■■□□□ 1.5
COPS7A-208ENST00000538410 OGFOD1Q8N543 542 aa24.39■■□□□ 1.5
COPS7A-208ENST00000538410 PCDHAC2Q9Y5I4 1007 aa24.39■■□□□ 1.5
COPS7A-208ENST00000538410 CD2BP2O95400 341 aaKnown RBP24.39■■□□□ 1.49
COPS7A-208ENST00000538410 CPA1P15085 419 aa24.39■■□□□ 1.49
COPS7A-208ENST00000538410 VEGFBP49765 207 aa24.39■■□□□ 1.49
COPS7A-208ENST00000538410 SBK1Q52WX2 424 aa24.39■■□□□ 1.49
COPS7A-208ENST00000538410 BLOC1S2Q6QNY1 142 aa24.39■■□□□ 1.49
COPS7A-208ENST00000538410 USP48Q86UV5 1035 aa24.39■■□□□ 1.49
COPS7A-208ENST00000538410 DCPSQ96C86 337 aaKnown RBP24.39■■□□□ 1.49
COPS7A-208ENST00000538410 TBC1D2Q9BYX2 928 aa24.39■■□□□ 1.49
COPS7A-208ENST00000538410 ARPP21Q9UBL0 812 aaPredicted RBP24.39■■□□□ 1.49
COPS7A-208ENST00000538410 ANAPC4Q9UJX5 808 aa24.39■■□□□ 1.49
COPS7A-208ENST00000538410 MINDY4BA8MYZ0 360 aa24.38■■□□□ 1.49
COPS7A-208ENST00000538410 USP17L12C9JPN9 530 aa24.38■■□□□ 1.49
COPS7A-208ENST00000538410 USP17L21D6R901 530 aa24.38■■□□□ 1.49
COPS7A-208ENST00000538410 CELF2O95319 508 aaKnown RBP24.38■■□□□ 1.49
COPS7A-208ENST00000538410 CTDSPL2Q05D32 466 aa24.38■■□□□ 1.49
COPS7A-208ENST00000538410 PPARAQ07869 468 aa24.38■■□□□ 1.49
COPS7A-208ENST00000538410 TBC1D10CQ8IV04 446 aa24.38■■□□□ 1.49
COPS7A-208ENST00000538410 MAPKAPK5Q8IW41 473 aa24.38■■□□□ 1.49
COPS7A-208ENST00000538410 TTC14Q96N46 770 aa24.38■■□□□ 1.49
COPS7A-208ENST00000538410 MCM9Q9NXL9 1143 aa24.38■■□□□ 1.49
COPS7A-208ENST00000538410 FLT1P17948 1338 aa24.37■■□□□ 1.49
COPS7A-208ENST00000538410 HMGB1P09429 215 aaKnown RBP24.37■■□□□ 1.49
COPS7A-208ENST00000538410 RPS6KB1P23443 525 aa24.37■■□□□ 1.49
COPS7A-208ENST00000538410 MMP14P50281 582 aa24.37■■□□□ 1.49
COPS7A-208ENST00000538410 COL9A3Q14050 684 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms