RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 NOL10Q9BSC4 688 aaKnown RBP21.07■□□□□ 0.96
GPN3-202ENST00000537466 ELP3Q9H9T3 547 aa21.07■□□□□ 0.96
GPN3-202ENST00000537466 ATRNL1Q5VV63 1379 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 MYH1P12882 1939 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 MAP4K4O95819 1239 aaPredicted RBP21.06■□□□□ 0.96
GPN3-202ENST00000537466 GJA5P36382 358 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 LBX1P52954 281 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 PPP4CP60510 307 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 MAP3K9P80192 1104 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 MAP3K12Q12852 859 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 TTF1Q15361 905 aaPredicted RBP21.06■□□□□ 0.96
GPN3-202ENST00000537466 DCAF15Q66K64 600 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 TEX11Q8IYF3 940 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 WRNIP1Q96S55 665 aa21.06■□□□□ 0.96
GPN3-202ENST00000537466 BAG3O95817 575 aa21.05■□□□□ 0.96
GPN3-202ENST00000537466 SLURP2P0DP57 97 aa21.05■□□□□ 0.96
GPN3-202ENST00000537466 DYNLL1P63167 89 aaKnown RBP21.05■□□□□ 0.96
GPN3-202ENST00000537466 HDAC1Q13547 482 aaPredicted RBP21.05■□□□□ 0.96
GPN3-202ENST00000537466 AAMPQ13685 434 aa21.05■□□□□ 0.96
GPN3-202ENST00000537466 COL13A1Q5TAT6 717 aaPredicted RBP21.05■□□□□ 0.96
GPN3-202ENST00000537466 ZSCAN29Q8IWY8 852 aaPredicted RBP21.05■□□□□ 0.96
GPN3-202ENST00000537466 CNKSR2Q8WXI2 1034 aa21.05■□□□□ 0.96
GPN3-202ENST00000537466 ZKSCAN4Q969J2 545 aaPredicted RBP21.05■□□□□ 0.96
GPN3-202ENST00000537466 HAUS7Q99871 368 aa21.05■□□□□ 0.96
GPN3-202ENST00000537466 ZNF341Q9BYN7 854 aa21.05■□□□□ 0.96
GPN3-202ENST00000537466 CASP8AP2Q9UKL3 1982 aa21.04■□□□□ 0.96
GPN3-202ENST00000537466 NPM3O75607 178 aaKnown RBP21.04■□□□□ 0.96
GPN3-202ENST00000537466 MIGA1Q8NAN2 632 aa21.04■□□□□ 0.96
GPN3-202ENST00000537466 PAG1Q9NWQ8 432 aa21.04■□□□□ 0.96
GPN3-202ENST00000537466 ATAD5Q96QE3 1844 aa21.03■□□□□ 0.96
GPN3-202ENST00000537466 ZBTB48P10074 688 aaPredicted RBP21.03■□□□□ 0.96
GPN3-202ENST00000537466 INPP5BP32019 993 aa21.03■□□□□ 0.96
GPN3-202ENST00000537466 TSHZ3Q63HK5 1081 aa21.03■□□□□ 0.96
GPN3-202ENST00000537466 REM2Q8IYK8 340 aaPredicted RBP21.03■□□□□ 0.96
GPN3-202ENST00000537466 OPTNQ96CV9 577 aa21.03■□□□□ 0.96
GPN3-202ENST00000537466 OSBPL5Q9H0X9 879 aaPredicted RBP21.03■□□□□ 0.96
GPN3-202ENST00000537466 ECHDC1Q9NTX5 307 aa21.03■□□□□ 0.96
GPN3-202ENST00000537466 RNF186Q9NXI6 227 aa21.03■□□□□ 0.96
GPN3-202ENST00000537466 CSADQ9Y600 493 aa21.03■□□□□ 0.96
GPN3-202ENST00000537466 SNCAIPQ9Y6H5 919 aa21.03■□□□□ 0.96
GPN3-202ENST00000537466 COL2A1P02458 1487 aaPredicted RBP21.03■□□□□ 0.96
GPN3-202ENST00000537466 DOCK1Q14185 1865 aa21.03■□□□□ 0.96
GPN3-202ENST00000537466 CA12O43570 354 aa21.02■□□□□ 0.96
GPN3-202ENST00000537466 PDE6AP16499 860 aa21.02■□□□□ 0.96
GPN3-202ENST00000537466 PLCG2P16885 1265 aa21.02■□□□□ 0.96
GPN3-202ENST00000537466 TM4SF4P48230 202 aa21.02■□□□□ 0.96
GPN3-202ENST00000537466 IRX6P78412 446 aaPredicted RBP21.02■□□□□ 0.96
GPN3-202ENST00000537466 SLC9C2Q5TAH2 1124 aa21.02■□□□□ 0.96
GPN3-202ENST00000537466 TGFBRAP1Q8WUH2 860 aa21.02■□□□□ 0.96
GPN3-202ENST00000537466 ZNF112Q9UJU3 913 aa21.02■□□□□ 0.96
GPN3-202ENST00000537466 TRPA1O75762 1119 aa21.01■□□□□ 0.95
GPN3-202ENST00000537466 NAV1Q8NEY1 1877 aa21.01■□□□□ 0.95
GPN3-202ENST00000537466 OTUD7AQ8TE49 926 aaPredicted RBP21.01■□□□□ 0.95
GPN3-202ENST00000537466 MAPKAPK5Q8IW41 473 aa21.01■□□□□ 0.95
GPN3-202ENST00000537466 GCC1Q96CN9 775 aa21.01■□□□□ 0.95
GPN3-202ENST00000537466 PRDM10Q9NQV6 1147 aa21.01■□□□□ 0.95
GPN3-202ENST00000537466 PHIPQ8WWQ0 1821 aa21■□□□□ 0.95
GPN3-202ENST00000537466 FLT1P17948 1338 aa21■□□□□ 0.95
GPN3-202ENST00000537466 ZNF532Q9HCE3 1301 aa21■□□□□ 0.95
GPN3-202ENST00000537466 DDX60LQ5H9U9 1706 aaKnown RBP21■□□□□ 0.95
GPN3-202ENST00000537466 TCRBV5S4A2TA0A5A2 114 aa21■□□□□ 0.95
GPN3-202ENST00000537466 MAP3K10Q02779 954 aa21■□□□□ 0.95
GPN3-202ENST00000537466 SREBF2Q12772 1141 aa21■□□□□ 0.95
GPN3-202ENST00000537466 SLFNL1Q499Z3 407 aa21■□□□□ 0.95
GPN3-202ENST00000537466 TMED8Q6PL24 325 aaPredicted RBP21■□□□□ 0.95
GPN3-202ENST00000537466 OTUD5Q96G74 571 aa21■□□□□ 0.95
GPN3-202ENST00000537466 SAGE1Q9NXZ1 904 aa21■□□□□ 0.95
GPN3-202ENST00000537466 MANSC4A6NHS7 340 aaPredicted RBP20.99■□□□□ 0.95
GPN3-202ENST00000537466 SPDYE5A6NIY4 337 aa20.99■□□□□ 0.95
GPN3-202ENST00000537466 FAM196BA6NMK8 535 aa20.99■□□□□ 0.95
GPN3-202ENST00000537466 PHF20L1A8MW92 1017 aa20.99■□□□□ 0.95
GPN3-202ENST00000537466 CHGBP05060 677 aa20.99■□□□□ 0.95
GPN3-202ENST00000537466 ANKRD45Q5TZF3 282 aa20.99■□□□□ 0.95
GPN3-202ENST00000537466 GPATCH3Q96I76 525 aa20.99■□□□□ 0.95
GPN3-202ENST00000537466 RIOK1Q9BRS2 568 aaKnown RBP20.99■□□□□ 0.95
GPN3-202ENST00000537466 IGHDP01880 384 aa20.98■□□□□ 0.95
GPN3-202ENST00000537466 PTPRFP10586 1907 aa20.97■□□□□ 0.95
GPN3-202ENST00000537466 ADD2P35612 726 aa20.97■□□□□ 0.95
GPN3-202ENST00000537466 ERO1BQ86YB8 467 aa20.97■□□□□ 0.95
GPN3-202ENST00000537466 MS4A4AQ96JQ5 239 aa20.97■□□□□ 0.95
GPN3-202ENST00000537466 SALL3Q9BXA9 1300 aa20.97■□□□□ 0.95
GPN3-202ENST00000537466 BAZ2AQ9UIF9 1905 aaKnown RBP20.97■□□□□ 0.95
GPN3-202ENST00000537466 MAGEB6P1A0A0J9YX57 407 aa20.96■□□□□ 0.95
GPN3-202ENST00000537466 NOL9Q5SY16 702 aaKnown RBP20.96■□□□□ 0.95
GPN3-202ENST00000537466 PI4K2BQ8TCG2 481 aa20.96■□□□□ 0.95
GPN3-202ENST00000537466 RWDD1Q9H446 243 aaPredicted RBP20.96■□□□□ 0.95
GPN3-202ENST00000537466 SAP30BPQ9UHR5 308 aaKnown RBP20.96■□□□□ 0.95
GPN3-202ENST00000537466 PALD1Q9ULE6 856 aa20.96■□□□□ 0.95
GPN3-202ENST00000537466 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
GPN3-202ENST00000537466 IGF2BP3O00425 579 aaKnown RBP eCLIP20.95■□□□□ 0.94
GPN3-202ENST00000537466 TBC1D12O60347 775 aa20.95■□□□□ 0.94
GPN3-202ENST00000537466 INHBEP58166 350 aa20.95■□□□□ 0.94
GPN3-202ENST00000537466 IFNL1Q8IU54 200 aa20.95■□□□□ 0.94
GPN3-202ENST00000537466 CERS3Q8IU89 383 aa20.95■□□□□ 0.94
GPN3-202ENST00000537466 SMC5Q8IY18 1101 aa20.95■□□□□ 0.94
GPN3-202ENST00000537466 PTPN18Q99952 460 aa20.95■□□□□ 0.94
GPN3-202ENST00000537466 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.95■□□□□ 0.94
GPN3-202ENST00000537466 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.95■□□□□ 0.94
GPN3-202ENST00000537466 TESPA1A2RU30 521 aaPredicted RBP20.94■□□□□ 0.94
GPN3-202ENST00000537466 IRF6O14896 467 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms