RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 ATXN3LQ9H3M9 355 aa6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 SEMA6CQ9H3T2 930 aa6.96□□□□□ -1.3
ATPAF1-211ENST00000534216 ZNF16P17020 682 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-211ENST00000534216 MAP7Q14244 749 aa6.95□□□□□ -1.3
ATPAF1-211ENST00000534216 NFKBIBQ15653 356 aa6.95□□□□□ -1.3
ATPAF1-211ENST00000534216 PIDD1Q9HB75 910 aa6.95□□□□□ -1.3
ATPAF1-211ENST00000534216 LIG3P49916 1009 aa6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 RPS26P62854 115 aaKnown RBP6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 ERVK-24P63145 666 aa6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 PTPN11Q06124 597 aaPredicted RBP6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 MRPL58Q14197 206 aaKnown RBP6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 TTLL4Q14679 1199 aa6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 MAP3K11Q16584 847 aa6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 ZDHHC13Q8IUH4 622 aa6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 MFSD14AQ96MC6 490 aa6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 PRKAG2Q9UGJ0 569 aa6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 RNF112Q9ULX5 631 aa6.94□□□□□ -1.3
ATPAF1-211ENST00000534216 DYNC1LI2O43237 492 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-211ENST00000534216 HCLS1P14317 486 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-211ENST00000534216 SEZ6L2Q6UXD5 910 aa6.93□□□□□ -1.3
ATPAF1-211ENST00000534216 AGMOQ6ZNB7 445 aa6.93□□□□□ -1.3
ATPAF1-211ENST00000534216 SHKBP1Q8TBC3 707 aa6.93□□□□□ -1.3
ATPAF1-211ENST00000534216 GAL3ST3Q96A11 431 aa6.93□□□□□ -1.3
ATPAF1-211ENST00000534216 PCDHA4Q9UN74 947 aa6.93□□□□□ -1.3
ATPAF1-211ENST00000534216 DAGLAQ9Y4D2 1042 aa6.93□□□□□ -1.3
ATPAF1-211ENST00000534216 DCDC2CA8MYV0 355 aa6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 NEFMP07197 916 aa6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 RLBP1P12271 317 aa6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 ADMP35318 185 aa6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 SMYD4Q8IYR2 804 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 FBXL6Q8N531 539 aa6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 RNF214Q8ND24 703 aa6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 GATA6Q92908 595 aa6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 PCDHB5Q9Y5E4 795 aa6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 CSADQ9Y600 493 aa6.92□□□□□ -1.3
ATPAF1-211ENST00000534216 RBM47A0AV96 593 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 WDR64B1ANS9 1081 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 RNGTTO60942 597 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 F13BP05160 661 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 RING1Q06587 406 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 PPM1JQ5JR12 505 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 ZAR1Q86SH2 424 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 SHISA5Q8N114 240 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 PHC3Q8NDX5 983 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 ISL2Q96A47 359 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 TBC1D32Q96NH3 1257 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 BCL11AQ9H165 835 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 C1GALT1Q9NS00 363 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 TLR6Q9Y2C9 796 aa6.91□□□□□ -1.3
ATPAF1-211ENST00000534216 PRR19A6NJB7 356 aa6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 TGFB1P01137 390 aa6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 TFE3P19532 575 aaPredicted RBP6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 LMNB1P20700 586 aa6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 NTF4P34130 210 aa6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 SEPT6Q14141 434 aa6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 INPP5AQ14642 412 aa6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 LRFN4Q6PJG9 635 aa6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 C12orf40Q86WS4 652 aa6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 LGR6Q9HBX8 967 aa6.9□□□□□ -1.3
ATPAF1-211ENST00000534216 FANCGO15287 622 aa6.89□□□□□ -1.31
ATPAF1-211ENST00000534216 HDXQ7Z353 690 aa6.89□□□□□ -1.31
ATPAF1-211ENST00000534216 GIMAP7Q8NHV1 300 aa6.89□□□□□ -1.31
ATPAF1-211ENST00000534216 ELMO3Q96BJ8 720 aa6.89□□□□□ -1.31
ATPAF1-211ENST00000534216 PLPPR2Q96GM1 343 aa6.89□□□□□ -1.31
ATPAF1-211ENST00000534216 KRTAP4-12Q9BQ66 201 aa6.89□□□□□ -1.31
ATPAF1-211ENST00000534216 MIR1-1HGQ9H1L0 117 aa6.89□□□□□ -1.31
ATPAF1-211ENST00000534216 ATG3Q9NT62 314 aa6.89□□□□□ -1.31
ATPAF1-211ENST00000534216 PCOLCE2Q9UKZ9 415 aa6.89□□□□□ -1.31
ATPAF1-211ENST00000534216 SCO2A0A1W2PP80 73 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 FAM170BA6NMN3 283 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 CDK8P49336 464 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 CPSF6Q16630 551 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 WIPI1Q5MNZ9 446 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 LDLRAD1Q5T700 205 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 ZBTB37Q5TC79 503 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 CYFIP1Q7L576 1253 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 RSRP1Q9BUV0 290 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 OSBPL1AQ9BXW6 950 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 PICK1Q9NRD5 415 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 SNCAIPQ9Y6H5 919 aa6.88□□□□□ -1.31
ATPAF1-211ENST00000534216 F6X3S4 739 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 CDK5R2Q13319 367 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 LRP8Q14114 963 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 ARTNQ5T4W7 220 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 RELL1Q8IUW5 271 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 Q8N3U1 123 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 RGS22Q8NE09 1264 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 RHOVQ96L33 236 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 TMEM74Q96NL1 305 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 METTL22Q9BUU2 404 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 SSU72Q9NP77 194 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 PIM2Q9P1W9 311 aa6.87□□□□□ -1.31
ATPAF1-211ENST00000534216 COBLO75128 1261 aa6.86□□□□□ -1.31
ATPAF1-211ENST00000534216 GBP2P32456 591 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-211ENST00000534216 CYP27A1Q02318 531 aa6.86□□□□□ -1.31
ATPAF1-211ENST00000534216 LMNB2Q03252 620 aa6.86□□□□□ -1.31
ATPAF1-211ENST00000534216 PWP1Q13610 501 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms