RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 XAGE2Q96GT9 111 aa22.4■■□□□ 1.18
UBXN1-216ENST00000533908 ABCF2Q9UG63 623 aa22.4■■□□□ 1.18
UBXN1-216ENST00000533908 TNNQ9UQP3 1299 aa22.4■■□□□ 1.18
UBXN1-216ENST00000533908 ZHX2Q9Y6X8 837 aa22.4■■□□□ 1.18
UBXN1-216ENST00000533908 BCRP11274 1271 aa22.39■■□□□ 1.17
UBXN1-216ENST00000533908 PTPRAP18433 802 aa22.39■■□□□ 1.17
UBXN1-216ENST00000533908 SCYL3Q8IZE3 742 aa22.39■■□□□ 1.17
UBXN1-216ENST00000533908 HDAC5Q9UQL6 1122 aa22.39■■□□□ 1.17
UBXN1-216ENST00000533908 SRGAP3O43295 1099 aa22.38■■□□□ 1.17
UBXN1-216ENST00000533908 FMNL1O95466 1100 aaPredicted RBP22.38■■□□□ 1.17
UBXN1-216ENST00000533908 MTX1Q13505 466 aa22.38■■□□□ 1.17
UBXN1-216ENST00000533908 ZGPATQ8N5A5 531 aaKnown RBP22.38■■□□□ 1.17
UBXN1-216ENST00000533908 ARHGAP45Q92619 1136 aa22.38■■□□□ 1.17
UBXN1-216ENST00000533908 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.38■■□□□ 1.17
UBXN1-216ENST00000533908 AFG3L2Q9Y4W6 797 aa22.38■■□□□ 1.17
UBXN1-216ENST00000533908 PDS5AQ29RF7 1337 aaKnown RBP22.37■■□□□ 1.17
UBXN1-216ENST00000533908 BTDP43251 543 aa22.37■■□□□ 1.17
UBXN1-216ENST00000533908 RHBDL3P58872 404 aa22.37■■□□□ 1.17
UBXN1-216ENST00000533908 MECOMQ03112 1051 aa22.37■■□□□ 1.17
UBXN1-216ENST00000533908 DZIP1Q86YF9 867 aaKnown RBP22.37■■□□□ 1.17
UBXN1-216ENST00000533908 ZSCAN29Q8IWY8 852 aaPredicted RBP22.37■■□□□ 1.17
UBXN1-216ENST00000533908 SHISA4Q96DD7 197 aa22.37■■□□□ 1.17
UBXN1-216ENST00000533908 A0A0G2JLL6 359 aaPredicted RBP22.36■■□□□ 1.17
UBXN1-216ENST00000533908 PICALMQ13492 652 aa22.36■■□□□ 1.17
UBXN1-216ENST00000533908 PI16Q6UXB8 463 aa22.36■■□□□ 1.17
UBXN1-216ENST00000533908 PRRT2Q7Z6L0 340 aaPredicted RBP22.36■■□□□ 1.17
UBXN1-216ENST00000533908 CCDC84Q86UT8 332 aaPredicted RBP22.36■■□□□ 1.17
UBXN1-216ENST00000533908 HMG20BQ9P0W2 317 aa22.36■■□□□ 1.17
UBXN1-216ENST00000533908 DOCK2Q92608 1830 aa22.36■■□□□ 1.17
UBXN1-216ENST00000533908 MROH7-TTC4A0A0A0MT08 1334 aa22.35■■□□□ 1.17
UBXN1-216ENST00000533908 GPR75-ASB3A0A0A6YYF3 556 aa22.35■■□□□ 1.17
UBXN1-216ENST00000533908 GNAI3P08754 354 aa22.35■■□□□ 1.17
UBXN1-216ENST00000533908 GRK4P32298 578 aa22.35■■□□□ 1.17
UBXN1-216ENST00000533908 TBC1D9Q6ZT07 1266 aa22.35■■□□□ 1.17
UBXN1-216ENST00000533908 PARK7Q99497 189 aaKnown RBP22.35■■□□□ 1.17
UBXN1-216ENST00000533908 PICK1Q9NRD5 415 aa22.35■■□□□ 1.17
UBXN1-216ENST00000533908 GABRQQ9UN88 632 aa22.35■■□□□ 1.17
UBXN1-216ENST00000533908 MYPNQ86TC9 1320 aa22.34■■□□□ 1.17
UBXN1-216ENST00000533908 CTNND1O60716 968 aaKnown RBP22.34■■□□□ 1.17
UBXN1-216ENST00000533908 HOXD10P28358 340 aa22.34■■□□□ 1.17
UBXN1-216ENST00000533908 PRKCZQ05513 592 aa22.34■■□□□ 1.17
UBXN1-216ENST00000533908 SPTY2D1Q68D10 685 aaPredicted RBP22.34■■□□□ 1.17
UBXN1-216ENST00000533908 RAET1EQ8TD07 263 aa22.34■■□□□ 1.17
UBXN1-216ENST00000533908 NEUROD6Q96NK8 337 aa22.34■■□□□ 1.17
UBXN1-216ENST00000533908 COLQQ9Y215 455 aaPredicted RBP22.34■■□□□ 1.17
UBXN1-216ENST00000533908 AKAP2Q9Y2D5 859 aa22.34■■□□□ 1.17
UBXN1-216ENST00000533908 FAM196BA6NMK8 535 aa22.33■■□□□ 1.17
UBXN1-216ENST00000533908 H0YGN5 161 aa22.33■■□□□ 1.17
UBXN1-216ENST00000533908 MVPQ14764 893 aaKnown RBP22.33■■□□□ 1.17
UBXN1-216ENST00000533908 GADL1Q6ZQY3 521 aa22.33■■□□□ 1.17
UBXN1-216ENST00000533908 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.17
UBXN1-216ENST00000533908 FASTKD5Q7L8L6 764 aaKnown RBP22.33■■□□□ 1.17
UBXN1-216ENST00000533908 SLF2Q8IX21 1173 aa22.33■■□□□ 1.17
UBXN1-216ENST00000533908 PHIPQ8WWQ0 1821 aa22.32■■□□□ 1.16
UBXN1-216ENST00000533908 PNMA6EA0A0J9YXQ4 647 aa22.32■■□□□ 1.16
UBXN1-216ENST00000533908 CCL5P13501 91 aa22.32■■□□□ 1.16
UBXN1-216ENST00000533908 TRIM75PA6NK02 468 aa22.31■■□□□ 1.16
UBXN1-216ENST00000533908 BCAR3O75815 825 aa22.31■■□□□ 1.16
UBXN1-216ENST00000533908 TRIM27P14373 513 aa22.31■■□□□ 1.16
UBXN1-216ENST00000533908 FXR1P51114 621 aaKnown RBP eCLIP22.31■■□□□ 1.16
UBXN1-216ENST00000533908 FCGRTP55899 365 aa22.31■■□□□ 1.16
UBXN1-216ENST00000533908 RRP1BQ14684 758 aaKnown RBP22.31■■□□□ 1.16
UBXN1-216ENST00000533908 UBE2Q1Q7Z7E8 422 aa22.31■■□□□ 1.16
UBXN1-216ENST00000533908 SPATA5Q8NB90 893 aa22.31■■□□□ 1.16
UBXN1-216ENST00000533908 NSUN4Q96CB9 384 aaKnown RBP22.31■■□□□ 1.16
UBXN1-216ENST00000533908 TBC1D12O60347 775 aa22.3■■□□□ 1.16
UBXN1-216ENST00000533908 MGAMO43451 1857 aa22.3■■□□□ 1.16
UBXN1-216ENST00000533908 PTPRFP10586 1907 aa22.29■■□□□ 1.16
UBXN1-216ENST00000533908 CEP290O15078 2479 aa22.29■■□□□ 1.16
UBXN1-216ENST00000533908 NPM3O75607 178 aaKnown RBP22.29■■□□□ 1.16
UBXN1-216ENST00000533908 GJB1P08034 283 aa22.29■■□□□ 1.16
UBXN1-216ENST00000533908 GJA8P48165 433 aa22.29■■□□□ 1.16
UBXN1-216ENST00000533908 SLC45A1Q9Y2W3 748 aa22.29■■□□□ 1.16
UBXN1-216ENST00000533908 DOCK1Q14185 1865 aa22.28■■□□□ 1.16
UBXN1-216ENST00000533908 GNAI2P04899 355 aa22.28■■□□□ 1.16
UBXN1-216ENST00000533908 ARID4AP29374 1257 aaPredicted RBP22.28■■□□□ 1.16
UBXN1-216ENST00000533908 MCAMP43121 646 aa22.28■■□□□ 1.16
UBXN1-216ENST00000533908 FLT3LGP49771 235 aa22.28■■□□□ 1.16
UBXN1-216ENST00000533908 TREML2Q5T2D2 321 aa22.28■■□□□ 1.16
UBXN1-216ENST00000533908 CLUAP1Q96AJ1 413 aa22.28■■□□□ 1.16
UBXN1-216ENST00000533908 RNF208Q9H0X6 261 aa22.28■■□□□ 1.16
UBXN1-216ENST00000533908 UNC93B1Q9H1C4 597 aa22.28■■□□□ 1.16
UBXN1-216ENST00000533908 BIN2Q9UBW5 565 aaPredicted RBP22.28■■□□□ 1.16
UBXN1-216ENST00000533908 CCER2I3L3R5 266 aa22.27■■□□□ 1.16
UBXN1-216ENST00000533908 GORABQ5T7V8 394 aa22.27■■□□□ 1.16
UBXN1-216ENST00000533908 ATF7IPQ6VMQ6 1270 aa22.27■■□□□ 1.16
UBXN1-216ENST00000533908 FRAT1Q92837 279 aaPredicted RBP22.27■■□□□ 1.16
UBXN1-216ENST00000533908 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.27■■□□□ 1.16
UBXN1-216ENST00000533908 RAI14Q9P0K7 980 aa22.27■■□□□ 1.16
UBXN1-216ENST00000533908 ADCY3O60266 1144 aa22.26■■□□□ 1.15
UBXN1-216ENST00000533908 LDHCP07864 332 aa22.26■■□□□ 1.15
UBXN1-216ENST00000533908 ELNP15502 786 aa22.26■■□□□ 1.15
UBXN1-216ENST00000533908 SPP2Q13103 211 aa22.26■■□□□ 1.15
UBXN1-216ENST00000533908 OSBPL5Q9H0X9 879 aaPredicted RBP22.26■■□□□ 1.15
UBXN1-216ENST00000533908 AGTPBP1Q9UPW5 1226 aa22.26■■□□□ 1.15
UBXN1-216ENST00000533908 IPO8O15397 1037 aaKnown RBP22.25■■□□□ 1.15
UBXN1-216ENST00000533908 GSTO1P78417 241 aa22.25■■□□□ 1.15
UBXN1-216ENST00000533908 G3BP1Q13283 466 aaKnown RBP eCLIP22.25■■□□□ 1.15
UBXN1-216ENST00000533908 ANKRD13CQ8N6S4 541 aa22.25■■□□□ 1.15
UBXN1-216ENST00000533908 SLAIN1Q8ND83 568 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms