RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 DENND2AQ9ULE3 1009 aa16.24■□□□□ 0.19
COPB1-209ENST00000533096 AFG3L2Q9Y4W6 797 aa16.24■□□□□ 0.19
COPB1-209ENST00000533096 KIF16BQ96L93 1317 aa16.23■□□□□ 0.19
COPB1-209ENST00000533096 A0A0G2JLL6 359 aaPredicted RBP16.23■□□□□ 0.19
COPB1-209ENST00000533096 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
COPB1-209ENST00000533096 DLL1O00548 723 aa16.23■□□□□ 0.19
COPB1-209ENST00000533096 SH3BP5LQ7L8J4 393 aa16.23■□□□□ 0.19
COPB1-209ENST00000533096 PRRT2Q7Z6L0 340 aaPredicted RBP16.23■□□□□ 0.19
COPB1-209ENST00000533096 ANKRD13CQ8N6S4 541 aa16.23■□□□□ 0.19
COPB1-209ENST00000533096 PAWRQ96IZ0 340 aaKnown RBP16.23■□□□□ 0.19
COPB1-209ENST00000533096 PTPRCP08575 1304 aa16.22■□□□□ 0.19
COPB1-209ENST00000533096 ENTPD3O75355 529 aa16.22■□□□□ 0.19
COPB1-209ENST00000533096 ADORA1P30542 326 aa16.22■□□□□ 0.19
COPB1-209ENST00000533096 TIMM10P62072 90 aa16.22■□□□□ 0.19
COPB1-209ENST00000533096 DZIP1Q86YF9 867 aaKnown RBP16.22■□□□□ 0.19
COPB1-209ENST00000533096 COA7Q96BR5 231 aa16.22■□□□□ 0.19
COPB1-209ENST00000533096 PA2G4Q9UQ80 394 aaKnown RBP16.22■□□□□ 0.19
COPB1-209ENST00000533096 RPAP1Q9BWH6 1393 aaPredicted RBP16.22■□□□□ 0.19
COPB1-209ENST00000533096 OTOFQ9HC10 1997 aa16.21■□□□□ 0.19
COPB1-209ENST00000533096 CTNND1O60716 968 aaKnown RBP16.21■□□□□ 0.19
COPB1-209ENST00000533096 UBTFL1P0CB47 393 aaPredicted RBP16.21■□□□□ 0.19
COPB1-209ENST00000533096 LRCH3Q96II8 777 aa16.21■□□□□ 0.19
COPB1-209ENST00000533096 ECM29Q5VYK3 1845 aa16.21■□□□□ 0.19
COPB1-209ENST00000533096 CENPFP49454 3210 aa16.21■□□□□ 0.18
COPB1-209ENST00000533096 ZSWIM8A7E2V4 1837 aa16.2■□□□□ 0.18
COPB1-209ENST00000533096 FAM196BA6NMK8 535 aa16.2■□□□□ 0.18
COPB1-209ENST00000533096 SOX1O00570 391 aaPredicted RBP16.2■□□□□ 0.18
COPB1-209ENST00000533096 SPP2Q13103 211 aa16.2■□□□□ 0.18
COPB1-209ENST00000533096 CCDC102BQ68D86 513 aa16.2■□□□□ 0.18
COPB1-209ENST00000533096 PXYLP1Q8TE99 480 aa16.2■□□□□ 0.18
COPB1-209ENST00000533096 IDI2Q9BXS1 227 aa16.2■□□□□ 0.18
COPB1-209ENST00000533096 DDX4Q9NQI0 724 aaKnown RBP16.2■□□□□ 0.18
COPB1-209ENST00000533096 BTDP43251 543 aa16.19■□□□□ 0.18
COPB1-209ENST00000533096 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
COPB1-209ENST00000533096 SLF2Q8IX21 1173 aa16.19■□□□□ 0.18
COPB1-209ENST00000533096 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
COPB1-209ENST00000533096 PRO3102Q9H379 93 aa16.19■□□□□ 0.18
COPB1-209ENST00000533096 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.19■□□□□ 0.18
COPB1-209ENST00000533096 ZMYND8Q9ULU4 1186 aaPredicted RBP16.19■□□□□ 0.18
COPB1-209ENST00000533096 SEMA3EO15041 775 aa16.18■□□□□ 0.18
COPB1-209ENST00000533096 CIAO1O76071 339 aa16.18■□□□□ 0.18
COPB1-209ENST00000533096 IL15P40933 162 aaPredicted RBP16.18■□□□□ 0.18
COPB1-209ENST00000533096 SPTY2D1Q68D10 685 aaPredicted RBP16.18■□□□□ 0.18
COPB1-209ENST00000533096 NECAB2Q7Z6G3 386 aa16.18■□□□□ 0.18
COPB1-209ENST00000533096 C7orf61Q8IZ16 206 aa16.18■□□□□ 0.18
COPB1-209ENST00000533096 DIS3LQ8TF46 1054 aaKnown RBP16.18■□□□□ 0.18
COPB1-209ENST00000533096 NEUROD6Q96NK8 337 aa16.18■□□□□ 0.18
COPB1-209ENST00000533096 SMC4Q9NTJ3 1288 aa16.18■□□□□ 0.18
COPB1-209ENST00000533096 SALL1Q9NSC2 1324 aa16.18■□□□□ 0.18
COPB1-209ENST00000533096 MAP3K10Q02779 954 aa16.17■□□□□ 0.18
COPB1-209ENST00000533096 IRF5Q13568 498 aa16.17■□□□□ 0.18
COPB1-209ENST00000533096 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
COPB1-209ENST00000533096 AGTPBP1Q9UPW5 1226 aa16.17■□□□□ 0.18
COPB1-209ENST00000533096 SLC45A1Q9Y2W3 748 aa16.17■□□□□ 0.18
COPB1-209ENST00000533096 RBBP6Q7Z6E9 1792 aaKnown RBP16.17■□□□□ 0.18
COPB1-209ENST00000533096 A0A1B0GUL6 1792 aa16.16■□□□□ 0.18
COPB1-209ENST00000533096 SYN1P17600 705 aa16.16■□□□□ 0.18
COPB1-209ENST00000533096 MECOMQ03112 1051 aa16.16■□□□□ 0.18
COPB1-209ENST00000533096 TRIM32Q13049 653 aa16.16■□□□□ 0.18
COPB1-209ENST00000533096 RASGRF1Q13972 1273 aa16.16■□□□□ 0.18
COPB1-209ENST00000533096 TBC1D9Q6ZT07 1266 aa16.16■□□□□ 0.18
COPB1-209ENST00000533096 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.16■□□□□ 0.18
COPB1-209ENST00000533096 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
COPB1-209ENST00000533096 NOB1Q9ULX3 412 aaKnown RBP16.16■□□□□ 0.18
COPB1-209ENST00000533096 E9PSI1 815 aa16.15■□□□□ 0.18
COPB1-209ENST00000533096 HMGCS2P54868 508 aa16.15■□□□□ 0.18
COPB1-209ENST00000533096 TFCP2Q12800 502 aa16.15■□□□□ 0.18
COPB1-209ENST00000533096 GORABQ5T7V8 394 aa16.15■□□□□ 0.18
COPB1-209ENST00000533096 CDCA7LQ96GN5 454 aa16.15■□□□□ 0.18
COPB1-209ENST00000533096 XAGE2Q96GT9 111 aa16.15■□□□□ 0.18
COPB1-209ENST00000533096 CRISPLD2Q9H0B8 497 aa16.15■□□□□ 0.18
COPB1-209ENST00000533096 HMX1Q9NP08 348 aaPredicted RBP16.15■□□□□ 0.18
COPB1-209ENST00000533096 PAK6Q9NQU5 681 aaPredicted RBP16.15■□□□□ 0.18
COPB1-209ENST00000533096 PNMA3Q9UL41 463 aa16.15■□□□□ 0.18
COPB1-209ENST00000533096 GAKO14976 1311 aa16.15■□□□□ 0.18
COPB1-209ENST00000533096 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
COPB1-209ENST00000533096 CYP2B6P20813 491 aa16.14■□□□□ 0.17
COPB1-209ENST00000533096 ZNF280CQ8ND82 737 aa16.14■□□□□ 0.17
COPB1-209ENST00000533096 FAM163AQ96GL9 167 aaPredicted RBP16.14■□□□□ 0.17
COPB1-209ENST00000533096 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
COPB1-209ENST00000533096 BRCA2P51587 3418 aa16.14■□□□□ 0.17
COPB1-209ENST00000533096 ATRNL1Q5VV63 1379 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 GPR75-ASB3A0A0A6YYF3 556 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 PEX10O60683 326 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 LDHCP07864 332 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 GCLCP48506 637 aaPredicted RBP16.13■□□□□ 0.17
COPB1-209ENST00000533096 RHBDL3P58872 404 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 ASCC2Q9H1I8 757 aaPredicted RBP16.13■□□□□ 0.17
COPB1-209ENST00000533096 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 MROH7-TTC4A0A0A0MT08 1334 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 ZNF521Q96K83 1311 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 LAMB1P07942 1786 aa16.13■□□□□ 0.17
COPB1-209ENST00000533096 A0A1W2PPC1 479 aa16.12■□□□□ 0.17
COPB1-209ENST00000533096 TBC1D12O60347 775 aa16.12■□□□□ 0.17
COPB1-209ENST00000533096 PABPC4Q13310 644 aaKnown RBP eCLIP16.12■□□□□ 0.17
COPB1-209ENST00000533096 RRP1BQ14684 758 aaKnown RBP16.12■□□□□ 0.17
COPB1-209ENST00000533096 FAM110CQ1W6H9 321 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms