RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 DIXDC1Q155Q3 683 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 GRIK5Q16478 980 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
NR1H3-231ENST00000529540 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
NR1H3-231ENST00000529540 RIOK1Q9BRS2 568 aaKnown RBP17.16■□□□□ 0.34
NR1H3-231ENST00000529540 MXD3Q9BW11 206 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 BTDP43251 543 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 ADGRA1Q86SQ6 560 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 ZNF589Q86UQ0 364 aaPredicted RBP17.16■□□□□ 0.34
NR1H3-231ENST00000529540 MIGA1Q8NAN2 632 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 TMEM87AQ8NBN3 555 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 MTMR14Q8NCE2 650 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 AATFQ9NY61 560 aaKnown RBP eCLIP17.16■□□□□ 0.34
NR1H3-231ENST00000529540 CTNNA3Q9UI47 895 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 R3HCC1Q9Y3T6 440 aaKnown RBP17.16■□□□□ 0.34
NR1H3-231ENST00000529540 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 GJA3Q9Y6H8 435 aa17.16■□□□□ 0.34
NR1H3-231ENST00000529540 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
NR1H3-231ENST00000529540 CHGBP05060 677 aa17.15■□□□□ 0.34
NR1H3-231ENST00000529540 RBM5P52756 815 aaKnown RBP eCLIP17.15■□□□□ 0.34
NR1H3-231ENST00000529540 UVSSAQ2YD98 709 aa17.15■□□□□ 0.34
NR1H3-231ENST00000529540 GIMAP6Q6P9H5 292 aa17.15■□□□□ 0.34
NR1H3-231ENST00000529540 PALD1Q9ULE6 856 aa17.15■□□□□ 0.34
NR1H3-231ENST00000529540 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
NR1H3-231ENST00000529540 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
NR1H3-231ENST00000529540 ZMYM6O95789 1325 aa17.15■□□□□ 0.34
NR1H3-231ENST00000529540 ZNF541Q9H0D2 1346 aa17.15■□□□□ 0.34
NR1H3-231ENST00000529540 MYH2Q9UKX2 1941 aa17.15■□□□□ 0.34
NR1H3-231ENST00000529540 PATL2C9JE40 543 aaKnown RBP17.14■□□□□ 0.33
NR1H3-231ENST00000529540 MYO1BO43795 1136 aa17.14■□□□□ 0.33
NR1H3-231ENST00000529540 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
NR1H3-231ENST00000529540 SCNN1DP51172 638 aa17.14■□□□□ 0.33
NR1H3-231ENST00000529540 ZNF280AP59817 542 aaPredicted RBP17.14■□□□□ 0.33
NR1H3-231ENST00000529540 SLFNL1Q499Z3 407 aa17.14■□□□□ 0.33
NR1H3-231ENST00000529540 RNF20Q5VTR2 975 aa17.14■□□□□ 0.33
NR1H3-231ENST00000529540 MAP4K1Q92918 833 aa17.14■□□□□ 0.33
NR1H3-231ENST00000529540 LSG1Q9H089 658 aaKnown RBP17.14■□□□□ 0.33
NR1H3-231ENST00000529540 ARMT1Q9H993 441 aa17.14■□□□□ 0.33
NR1H3-231ENST00000529540 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
NR1H3-231ENST00000529540 WDR33Q9C0J8 1336 aaKnown RBP17.14■□□□□ 0.33
NR1H3-231ENST00000529540 H7C1D1 291 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 DYNC1I1O14576 645 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 SASS6Q6UVJ0 657 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 CCDC129Q6ZRS4 1044 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 MTERF4Q7Z6M4 381 aaKnown RBP17.13■□□□□ 0.33
NR1H3-231ENST00000529540 LCORLQ8N3X6 602 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 IL25Q9H293 177 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 APPP05067 770 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 LMOD1P29536 600 aaPredicted RBP17.13■□□□□ 0.33
NR1H3-231ENST00000529540 GMPSP49915 693 aaPredicted RBP17.13■□□□□ 0.33
NR1H3-231ENST00000529540 ALX1Q15699 326 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 CFAP100Q494V2 611 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 AMOTL1Q8IY63 956 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 TMOD2Q9NZR1 351 aa17.13■□□□□ 0.33
NR1H3-231ENST00000529540 CHAMP1Q96JM3 812 aa17.12■□□□□ 0.33
NR1H3-231ENST00000529540 PKNOX2Q96KN3 472 aa17.12■□□□□ 0.33
NR1H3-231ENST00000529540 ZMYND15Q9H091 742 aa17.12■□□□□ 0.33
NR1H3-231ENST00000529540 MYOZ2Q9NPC6 264 aa17.12■□□□□ 0.33
NR1H3-231ENST00000529540 CNOT7Q9UIV1 285 aaKnown RBP17.12■□□□□ 0.33
NR1H3-231ENST00000529540 UQCRHLA0A096LP55 91 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
NR1H3-231ENST00000529540 UQCRHP07919 91 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 HSPA4P34932 840 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 USP5P45974 858 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 APOBEC3HQ6NTF7 200 aaKnown RBP17.11■□□□□ 0.33
NR1H3-231ENST00000529540 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 TEX11Q8IYF3 940 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 NAPBQ9H115 298 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 GPRC5DQ9NZD1 345 aa17.11■□□□□ 0.33
NR1H3-231ENST00000529540 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-231ENST00000529540 DYNLL1P63167 89 aaKnown RBP17.1■□□□□ 0.33
NR1H3-231ENST00000529540 L3MBTL3Q96JM7 780 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-231ENST00000529540 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
NR1H3-231ENST00000529540 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
NR1H3-231ENST00000529540 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
NR1H3-231ENST00000529540 LETM1O95202 739 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-231ENST00000529540 TDO2P48775 406 aa17.1■□□□□ 0.33
NR1H3-231ENST00000529540 RHBDL3P58872 404 aa17.1■□□□□ 0.33
NR1H3-231ENST00000529540 PTH1RQ03431 593 aa17.1■□□□□ 0.33
NR1H3-231ENST00000529540 IMMTQ16891 758 aaKnown RBP17.1■□□□□ 0.33
NR1H3-231ENST00000529540 FOXD4L5Q5VV16 416 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-231ENST00000529540 IFNL3Q8IZI9 196 aa17.1■□□□□ 0.33
NR1H3-231ENST00000529540 FOXD4L4Q8WXT5 416 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-231ENST00000529540 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-231ENST00000529540 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
NR1H3-231ENST00000529540 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
NR1H3-231ENST00000529540 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
NR1H3-231ENST00000529540 FKBP1CQ5VVH2 108 aa17.09■□□□□ 0.33
NR1H3-231ENST00000529540 CDC42EP5Q6NZY7 148 aa17.09■□□□□ 0.33
NR1H3-231ENST00000529540 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-231ENST00000529540 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
NR1H3-231ENST00000529540 DDNO94850 711 aaPredicted RBP17.08■□□□□ 0.32
NR1H3-231ENST00000529540 FGAP02671 866 aa17.08■□□□□ 0.32
NR1H3-231ENST00000529540 KRT32Q14532 448 aa17.08■□□□□ 0.32
NR1H3-231ENST00000529540 NECTIN1Q15223 517 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms