RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 TTF1Q15361 905 aaPredicted RBP21.13■□□□□ 0.97
USP35-202ENST00000528910 IFFO2Q5TF58 517 aa21.13■□□□□ 0.97
USP35-202ENST00000528910 PLCG2P16885 1265 aa21.12■□□□□ 0.97
USP35-202ENST00000528910 MAP3K9P80192 1104 aa21.12■□□□□ 0.97
USP35-202ENST00000528910 SH3BP5LQ7L8J4 393 aa21.12■□□□□ 0.97
USP35-202ENST00000528910 SLC10A4Q96EP9 437 aa21.12■□□□□ 0.97
USP35-202ENST00000528910 WRNIP1Q96S55 665 aa21.12■□□□□ 0.97
USP35-202ENST00000528910 NOL10Q9BSC4 688 aaKnown RBP21.12■□□□□ 0.97
USP35-202ENST00000528910 ZNF341Q9BYN7 854 aa21.12■□□□□ 0.97
USP35-202ENST00000528910 PHIPQ8WWQ0 1821 aa21.11■□□□□ 0.97
USP35-202ENST00000528910 BAG3O95817 575 aa21.11■□□□□ 0.97
USP35-202ENST00000528910 GJA5P36382 358 aa21.11■□□□□ 0.97
USP35-202ENST00000528910 MAP3K12Q12852 859 aa21.11■□□□□ 0.97
USP35-202ENST00000528910 PICALMQ13492 652 aa21.11■□□□□ 0.97
USP35-202ENST00000528910 HDAC1Q13547 482 aaPredicted RBP21.11■□□□□ 0.97
USP35-202ENST00000528910 AATFQ9NY61 560 aaKnown RBP eCLIP21.11■□□□□ 0.97
USP35-202ENST00000528910 ZNF112Q9UJU3 913 aa21.11■□□□□ 0.97
USP35-202ENST00000528910 CSADQ9Y600 493 aa21.11■□□□□ 0.97
USP35-202ENST00000528910 SNCAIPQ9Y6H5 919 aa21.11■□□□□ 0.97
USP35-202ENST00000528910 PTPRFP10586 1907 aa21.1■□□□□ 0.97
USP35-202ENST00000528910 DDTLA6NHG4 134 aaPredicted RBP21.1■□□□□ 0.97
USP35-202ENST00000528910 TM4SF4P48230 202 aa21.1■□□□□ 0.97
USP35-202ENST00000528910 LBX1P52954 281 aa21.1■□□□□ 0.97
USP35-202ENST00000528910 SREBF2Q12772 1141 aa21.1■□□□□ 0.97
USP35-202ENST00000528910 MKRN3Q13064 507 aaKnown RBP21.1■□□□□ 0.97
USP35-202ENST00000528910 CERS3Q8IU89 383 aa21.1■□□□□ 0.97
USP35-202ENST00000528910 TEX11Q8IYF3 940 aa21.1■□□□□ 0.97
USP35-202ENST00000528910 MAGEB6Q8N7X4 407 aa21.1■□□□□ 0.97
USP35-202ENST00000528910 SH3RF3Q8TEJ3 882 aaPredicted RBP21.1■□□□□ 0.97
USP35-202ENST00000528910 DNAJC2Q99543 621 aaKnown RBP21.1■□□□□ 0.97
USP35-202ENST00000528910 HAUS7Q99871 368 aa21.1■□□□□ 0.97
USP35-202ENST00000528910 OSBPL5Q9H0X9 879 aaPredicted RBP21.1■□□□□ 0.97
USP35-202ENST00000528910 ELP3Q9H9T3 547 aa21.1■□□□□ 0.97
USP35-202ENST00000528910 CASP8AP2Q9UKL3 1982 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 MANSC4A6NHS7 340 aaPredicted RBP21.09■□□□□ 0.97
USP35-202ENST00000528910 SPDYE5A6NIY4 337 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 GOLIM4O00461 696 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 CYP7A1P22680 504 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 MAP3K10Q02779 954 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 MIGA2Q7L4E1 593 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 OPTNQ96CV9 577 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 ECHDC1Q9NTX5 307 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 PAG1Q9NWQ8 432 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 RNF186Q9NXI6 227 aa21.09■□□□□ 0.97
USP35-202ENST00000528910 NOL9Q5SY16 702 aaKnown RBP21.08■□□□□ 0.97
USP35-202ENST00000528910 BCL11AQ9H165 835 aa21.08■□□□□ 0.97
USP35-202ENST00000528910 BOLA2Q9H3K6 86 aa21.08■□□□□ 0.97
USP35-202ENST00000528910 TSKSQ9UJT2 592 aa21.08■□□□□ 0.97
USP35-202ENST00000528910 SUPT16HQ9Y5B9 1047 aaKnown RBP21.08■□□□□ 0.97
USP35-202ENST00000528910 FLT1P17948 1338 aa21.07■□□□□ 0.96
USP35-202ENST00000528910 PDE6AP16499 860 aa21.07■□□□□ 0.96
USP35-202ENST00000528910 ZSCAN29Q8IWY8 852 aaPredicted RBP21.07■□□□□ 0.96
USP35-202ENST00000528910 EDC3Q96F86 508 aaKnown RBP21.07■□□□□ 0.96
USP35-202ENST00000528910 INPP5BP32019 993 aa21.06■□□□□ 0.96
USP35-202ENST00000528910 ERO1BQ86YB8 467 aa21.06■□□□□ 0.96
USP35-202ENST00000528910 EXOC6Q8TAG9 804 aa21.06■□□□□ 0.96
USP35-202ENST00000528910 CNKSR2Q8WXI2 1034 aa21.06■□□□□ 0.96
USP35-202ENST00000528910 ZKSCAN4Q969J2 545 aaPredicted RBP21.06■□□□□ 0.96
USP35-202ENST00000528910 GCC1Q96CN9 775 aa21.06■□□□□ 0.96
USP35-202ENST00000528910 GPATCH3Q96I76 525 aa21.06■□□□□ 0.96
USP35-202ENST00000528910 RIOK1Q9BRS2 568 aaKnown RBP21.06■□□□□ 0.96
USP35-202ENST00000528910 TCRBV5S4A2TA0A5A2 114 aa21.05■□□□□ 0.96
USP35-202ENST00000528910 TESPA1A2RU30 521 aaPredicted RBP21.05■□□□□ 0.96
USP35-202ENST00000528910 PHF20L1A8MW92 1017 aa21.05■□□□□ 0.96
USP35-202ENST00000528910 TBC1D12O60347 775 aa21.05■□□□□ 0.96
USP35-202ENST00000528910 INHBEP58166 350 aa21.05■□□□□ 0.96
USP35-202ENST00000528910 DYNLL1P63167 89 aaKnown RBP21.05■□□□□ 0.96
USP35-202ENST00000528910 CFHR5Q9BXR6 569 aa21.05■□□□□ 0.96
USP35-202ENST00000528910 TTC41PQ6P2S7 1318 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 SALL3Q9BXA9 1300 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 TRPA1O75762 1119 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 PPIL2Q13356 520 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 SLC9C2Q5TAH2 1124 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 TNS4Q8IZW8 715 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 MIGA1Q8NAN2 632 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 TGFBRAP1Q8WUH2 860 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 OTUD5Q96G74 571 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 MS4A4AQ96JQ5 239 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 DHX36Q9H2U1 1008 aaKnown RBP21.04■□□□□ 0.96
USP35-202ENST00000528910 ZNF532Q9HCE3 1301 aa21.04■□□□□ 0.96
USP35-202ENST00000528910 IFNL1Q8IU54 200 aa21.03■□□□□ 0.96
USP35-202ENST00000528910 MAPKAPK5Q8IW41 473 aa21.03■□□□□ 0.96
USP35-202ENST00000528910 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.03■□□□□ 0.96
USP35-202ENST00000528910 IGF2BP3O00425 579 aaKnown RBP eCLIP21.02■□□□□ 0.96
USP35-202ENST00000528910 ALDH1A1P00352 501 aa21.02■□□□□ 0.96
USP35-202ENST00000528910 ADD2P35612 726 aa21.02■□□□□ 0.96
USP35-202ENST00000528910 PPATQ06203 517 aa21.02■□□□□ 0.96
USP35-202ENST00000528910 SCYL3Q8IZE3 742 aa21.02■□□□□ 0.96
USP35-202ENST00000528910 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.02■□□□□ 0.96
USP35-202ENST00000528910 BAZ2AQ9UIF9 1905 aaKnown RBP21.02■□□□□ 0.95
USP35-202ENST00000528910 LOC285556D6RIA3 1793 aa21.01■□□□□ 0.95
USP35-202ENST00000528910 SLURP2P0DP57 97 aa21.01■□□□□ 0.95
USP35-202ENST00000528910 GTF2A2P52657 109 aa21.01■□□□□ 0.95
USP35-202ENST00000528910 NOM1Q5C9Z4 860 aaKnown RBP21.01■□□□□ 0.95
USP35-202ENST00000528910 TSHZ3Q63HK5 1081 aa21.01■□□□□ 0.95
USP35-202ENST00000528910 SMC5Q8IY18 1101 aa21.01■□□□□ 0.95
USP35-202ENST00000528910 OTUD7AQ8TE49 926 aaPredicted RBP21.01■□□□□ 0.95
USP35-202ENST00000528910 HERC5Q9UII4 1024 aaKnown RBP21.01■□□□□ 0.95
USP35-202ENST00000528910 MYH8P13535 1937 aa21.01■□□□□ 0.95
USP35-202ENST00000528910 MAGEB6P1A0A0J9YX57 407 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms