RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 ACBD3Q9H3P7 528 aa5.29□□□□□ -1.56
CD44-226ENST00000527889 CAPN10Q9HC96 672 aa5.29□□□□□ -1.56
CD44-226ENST00000527889 RAB6BQ9NRW1 208 aa5.29□□□□□ -1.56
CD44-226ENST00000527889 MBIPQ9NS73 344 aa5.29□□□□□ -1.56
CD44-226ENST00000527889 IFT57Q9NWB7 429 aa5.29□□□□□ -1.56
CD44-226ENST00000527889 MIS18AQ9NYP9 233 aa5.29□□□□□ -1.56
CD44-226ENST00000527889 PRKAG2Q9UGJ0 569 aa5.29□□□□□ -1.56
CD44-226ENST00000527889 TAF1LQ8IZX4 1826 aa5.29□□□□□ -1.56
CD44-226ENST00000527889 ANKRD36CQ5JPF3 1778 aa5.29□□□□□ -1.56
CD44-226ENST00000527889 BTAF1O14981 1849 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 ELL2O00472 640 aaPredicted RBP5.28□□□□□ -1.56
CD44-226ENST00000527889 PDGFAP04085 211 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 USP5P45974 858 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 DNM1Q05193 864 aaKnown RBP5.28□□□□□ -1.56
CD44-226ENST00000527889 CALD1Q05682 793 aaKnown RBP5.28□□□□□ -1.56
CD44-226ENST00000527889 TEAD4Q15561 434 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 KRT24Q2M2I5 525 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 PLEKHO1Q53GL0 409 aaPredicted RBP5.28□□□□□ -1.56
CD44-226ENST00000527889 SH3PXD2AQ5TCZ1 1133 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 ZNF295-AS1Q8N0V1 137 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 LINC00528Q8N1L1 170 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 TSPYL6Q8N831 410 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 IL17REQ8NFR9 667 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 FBF1Q8TES7 1133 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 EDEM1Q92611 657 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 TRIM47Q96LD4 638 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 ZFP42Q96MM3 310 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 CRBNQ96SW2 442 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 GMLQ99445 158 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 ARHGEF10LQ9HCE6 1279 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 STRN4Q9NRL3 753 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 PGPEP1Q9NXJ5 209 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 PPP4R2Q9NY27 417 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 TNNQ9UQP3 1299 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 HRH3Q9Y5N1 445 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 GLI3P10071 1580 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 NUP188Q5SRE5 1749 aa5.28□□□□□ -1.56
CD44-226ENST00000527889 WDR17Q8IZU2 1322 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 PCNTO95613 3336 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 OVOS2A0A0G2JMS6 1433 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 CHL1O00533 1208 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 TCERG1O14776 1098 aaKnown RBP5.27□□□□□ -1.57
CD44-226ENST00000527889 KDM6AO15550 1401 aaPredicted RBP5.27□□□□□ -1.57
CD44-226ENST00000527889 ADAMTS2O95450 1211 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 CTSHP09668 335 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 TATP17735 454 aaPredicted RBP5.27□□□□□ -1.57
CD44-226ENST00000527889 ZAP70P43403 619 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 TNNI2P48788 182 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 TJP1Q07157 1748 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 RTN1Q16799 776 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 C11orf91Q3C1V1 193 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 C6orf118Q5T5N4 469 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 MPRIPQ6WCQ1 1025 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 TOM1L2Q6ZVM7 507 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 ALDH16A1Q8IZ83 802 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.27□□□□□ -1.57
CD44-226ENST00000527889 C8orf58Q8NAV2 365 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 PANK1Q8TE04 598 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 ZDHHC1Q8WTX9 485 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 SSH1Q8WYL5 1049 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 RAPGEF4Q8WZA2 1011 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 DHX38Q92620 1227 aaKnown RBP5.27□□□□□ -1.57
CD44-226ENST00000527889 FRAT1Q92837 279 aaPredicted RBP5.27□□□□□ -1.57
CD44-226ENST00000527889 CRELD1Q96HD1 420 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 CSRNP1Q96S65 589 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 PSMD1Q99460 953 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 DNAJC2Q99543 621 aaKnown RBP5.27□□□□□ -1.57
CD44-226ENST00000527889 LNPKQ9C0E8 428 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 LGR6Q9HBX8 967 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 SMC4Q9NTJ3 1288 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 CUEDC1Q9NWM3 386 aaPredicted RBP5.27□□□□□ -1.57
CD44-226ENST00000527889 TSPYL4Q9UJ04 414 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.27□□□□□ -1.57
CD44-226ENST00000527889 CHMP3Q9Y3E7 222 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 AK5Q9Y6K8 562 aa5.27□□□□□ -1.57
CD44-226ENST00000527889 MRC1P22897 1456 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 TUBGCP6Q96RT7 1819 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 SPEF2Q9C093 1822 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 SERTM1A2A2V5 107 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 SOBPA7XYQ1 873 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 RNMTO43148 476 aaKnown RBP5.26□□□□□ -1.57
CD44-226ENST00000527889 HTATSF1O43719 755 aaKnown RBP5.26□□□□□ -1.57
CD44-226ENST00000527889 VAMP4O75379 141 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 CT47B1P0C2W7 299 aaPredicted RBP5.26□□□□□ -1.57
CD44-226ENST00000527889 ATP2B1P20020 1258 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 NOS2P35228 1153 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 EVA1CP58658 441 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 DGKZQ13574 1117 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 TLR1Q15399 786 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 AMOTQ4VCS5 1084 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 AKAP4Q5JQC9 854 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 C1orf141Q5JVX7 400 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 ERICH6BQ5W0A0 696 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 CNKSR1Q969H4 720 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 ARMC5Q96C12 935 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 FRMD6Q96NE9 622 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 ESYT1Q9BSJ8 1104 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 BTG4Q9NY30 223 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 KLK14Q9P0G3 267 aa5.26□□□□□ -1.57
CD44-226ENST00000527889 HCN4Q9Y3Q4 1203 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms