RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 PHIPQ8WWQ0 1821 aa22.17■■□□□ 1.14
PVT1-220ENST00000524165 FRAT2O75474 233 aaPredicted RBP22.16■■□□□ 1.14
PVT1-220ENST00000524165 MDM2Q00987 491 aaPredicted RBP22.16■■□□□ 1.14
PVT1-220ENST00000524165 FAM110CQ1W6H9 321 aa22.16■■□□□ 1.14
PVT1-220ENST00000524165 ANKRD13CQ8N6S4 541 aa22.16■■□□□ 1.14
PVT1-220ENST00000524165 AFG3L2Q9Y4W6 797 aa22.16■■□□□ 1.14
PVT1-220ENST00000524165 DOCK2Q92608 1830 aa22.15■■□□□ 1.14
PVT1-220ENST00000524165 MYBBP1AQ9BQG0 1328 aaKnown RBP22.15■■□□□ 1.14
PVT1-220ENST00000524165 FKBP5Q13451 457 aaPredicted RBP22.15■■□□□ 1.14
PVT1-220ENST00000524165 EPHA10Q5JZY3 1008 aa22.15■■□□□ 1.14
PVT1-220ENST00000524165 SCYL3Q8IZE3 742 aa22.15■■□□□ 1.14
PVT1-220ENST00000524165 CDX2Q99626 313 aaPredicted RBP22.15■■□□□ 1.14
PVT1-220ENST00000524165 PICK1Q9NRD5 415 aa22.15■■□□□ 1.14
PVT1-220ENST00000524165 COL6A1P12109 1028 aa22.14■■□□□ 1.13
PVT1-220ENST00000524165 PTPRAP18433 802 aa22.14■■□□□ 1.13
PVT1-220ENST00000524165 TCP10Q12799 353 aa22.14■■□□□ 1.13
PVT1-220ENST00000524165 CAVIN4Q5BKX8 364 aa22.14■■□□□ 1.13
PVT1-220ENST00000524165 PLXNB2O15031 1838 aa22.13■■□□□ 1.13
PVT1-220ENST00000524165 MROH5Q6ZUA9 1318 aa22.13■■□□□ 1.13
PVT1-220ENST00000524165 PHF20L1A8MW92 1017 aa22.13■■□□□ 1.13
PVT1-220ENST00000524165 TRIM32Q13049 653 aa22.13■■□□□ 1.13
PVT1-220ENST00000524165 GJD2Q9UKL4 321 aa22.13■■□□□ 1.13
PVT1-220ENST00000524165 MYH13Q9UKX3 1938 aa22.13■■□□□ 1.13
PVT1-220ENST00000524165 DOCK1Q14185 1865 aa22.13■■□□□ 1.13
PVT1-220ENST00000524165 DNAH12Q6ZR08 3092 aa22.12■■□□□ 1.13
PVT1-220ENST00000524165 APAF1O14727 1248 aa22.12■■□□□ 1.13
PVT1-220ENST00000524165 PNMA3Q9UL41 463 aa22.12■■□□□ 1.13
PVT1-220ENST00000524165 AGTPBP1Q9UPW5 1226 aa22.12■■□□□ 1.13
PVT1-220ENST00000524165 TWISTNBQ3B726 338 aaPredicted RBP22.11■■□□□ 1.13
PVT1-220ENST00000524165 MAP3K21Q5TCX8 1036 aa22.11■■□□□ 1.13
PVT1-220ENST00000524165 ATRNL1Q5VV63 1379 aa22.11■■□□□ 1.13
PVT1-220ENST00000524165 CDH23Q9H251 3354 aa22.1■■□□□ 1.13
PVT1-220ENST00000524165 NFIAQ12857 509 aa22.1■■□□□ 1.13
PVT1-220ENST00000524165 LRRC26Q2I0M4 334 aa22.1■■□□□ 1.13
PVT1-220ENST00000524165 CDC42EP5Q6NZY7 148 aa22.1■■□□□ 1.13
PVT1-220ENST00000524165 PUS3Q9BZE2 481 aaKnown RBP22.1■■□□□ 1.13
PVT1-220ENST00000524165 GCLCP48506 637 aaPredicted RBP22.09■■□□□ 1.13
PVT1-220ENST00000524165 TRIB2Q92519 343 aa22.09■■□□□ 1.13
PVT1-220ENST00000524165 LBHD1Q9BQE6 289 aaPredicted RBP22.09■■□□□ 1.13
PVT1-220ENST00000524165 SEMA6BQ9H3T3 888 aa22.09■■□□□ 1.13
PVT1-220ENST00000524165 FAM198AQ9UFP1 575 aa22.09■■□□□ 1.13
PVT1-220ENST00000524165 MAST2Q6P0Q8 1798 aa22.09■■□□□ 1.13
PVT1-220ENST00000524165 BEND3Q5T5X7 828 aa22.08■■□□□ 1.13
PVT1-220ENST00000524165 TSR2Q969E8 191 aaKnown RBP22.08■■□□□ 1.13
PVT1-220ENST00000524165 DAGLAQ9Y4D2 1042 aa22.08■■□□□ 1.13
PVT1-220ENST00000524165 GRM8O00222 908 aa22.07■■□□□ 1.12
PVT1-220ENST00000524165 LOC285556D6RIA3 1793 aa22.07■■□□□ 1.12
PVT1-220ENST00000524165 TRIM75PA6NK02 468 aa22.06■■□□□ 1.12
PVT1-220ENST00000524165 TNFRSF10AO00220 468 aa22.06■■□□□ 1.12
PVT1-220ENST00000524165 PRKAR2AP13861 404 aaKnown RBP22.06■■□□□ 1.12
PVT1-220ENST00000524165 PLA2G5P39877 138 aa22.06■■□□□ 1.12
PVT1-220ENST00000524165 MAP3K10Q02779 954 aa22.06■■□□□ 1.12
PVT1-220ENST00000524165 LTBP2Q14767 1821 aa22.06■■□□□ 1.12
PVT1-220ENST00000524165 KIF16BQ96L93 1317 aa22.06■■□□□ 1.12
PVT1-220ENST00000524165 CTNND1O60716 968 aaKnown RBP22.05■■□□□ 1.12
PVT1-220ENST00000524165 TREML2Q5T2D2 321 aa22.05■■□□□ 1.12
PVT1-220ENST00000524165 PROCA1Q8NCQ7 364 aaPredicted RBP22.05■■□□□ 1.12
PVT1-220ENST00000524165 WDR66Q8TBY9 1149 aa22.05■■□□□ 1.12
PVT1-220ENST00000524165 SPINK5Q9NQ38 1064 aaPredicted RBP22.05■■□□□ 1.12
PVT1-220ENST00000524165 LRRFIP2Q9Y608 721 aaKnown RBP22.05■■□□□ 1.12
PVT1-220ENST00000524165 FRMPD3Q5JV73 1810 aa22.05■■□□□ 1.12
PVT1-220ENST00000524165 XRCC5P13010 732 aaKnown RBP22.04■■□□□ 1.12
PVT1-220ENST00000524165 TJAP1Q5JTD0 557 aa22.04■■□□□ 1.12
PVT1-220ENST00000524165 ZFPM1Q8IX07 1006 aa22.04■■□□□ 1.12
PVT1-220ENST00000524165 MYLIPQ8WY64 445 aa22.04■■□□□ 1.12
PVT1-220ENST00000524165 PDE8BO95263 885 aa22.03■■□□□ 1.12
PVT1-220ENST00000524165 TRMT44Q8IYL2 757 aaKnown RBP22.03■■□□□ 1.12
PVT1-220ENST00000524165 VGLL2Q8N8G2 317 aa22.03■■□□□ 1.12
PVT1-220ENST00000524165 USP40Q9NVE5 1235 aa22.03■■□□□ 1.12
PVT1-220ENST00000524165 ENTPD3O75355 529 aa22.02■■□□□ 1.12
PVT1-220ENST00000524165 FOSL2P15408 326 aa22.02■■□□□ 1.12
PVT1-220ENST00000524165 DIXDC1Q155Q3 683 aa22.02■■□□□ 1.12
PVT1-220ENST00000524165 METTL24Q5JXM2 366 aa22.02■■□□□ 1.12
PVT1-220ENST00000524165 LHX8Q68G74 356 aa22.02■■□□□ 1.12
PVT1-220ENST00000524165 NCOR1O75376 2440 aa22.01■■□□□ 1.11
PVT1-220ENST00000524165 CYP2B6P20813 491 aa22.01■■□□□ 1.11
PVT1-220ENST00000524165 PABPC4Q13310 644 aaKnown RBP eCLIP22.01■■□□□ 1.11
PVT1-220ENST00000524165 IDI2Q9BXS1 227 aa22.01■■□□□ 1.11
PVT1-220ENST00000524165 TTYH1Q9H313 450 aaPredicted RBP22.01■■□□□ 1.11
PVT1-220ENST00000524165 C9orf78Q9NZ63 289 aaPredicted RBP22.01■■□□□ 1.11
PVT1-220ENST00000524165 MORF4L1Q9UBU8 362 aa22.01■■□□□ 1.11
PVT1-220ENST00000524165 RAPGEFL1Q9UHV5 662 aa22.01■■□□□ 1.11
PVT1-220ENST00000524165 F6X3S4 739 aa22■■□□□ 1.11
PVT1-220ENST00000524165 SMAD3P84022 425 aaKnown RBP22■■□□□ 1.11
PVT1-220ENST00000524165 CACNB2Q08289 660 aaPredicted RBP22■■□□□ 1.11
PVT1-220ENST00000524165 SOCS4Q8WXH5 440 aa22■■□□□ 1.11
PVT1-220ENST00000524165 FAM122AQ96E09 287 aa22■■□□□ 1.11
PVT1-220ENST00000524165 NUDT12Q9BQG2 462 aa22■■□□□ 1.11
PVT1-220ENST00000524165 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
PVT1-220ENST00000524165 RGS3P49796 1198 aa21.99■■□□□ 1.11
PVT1-220ENST00000524165 LRRC24Q50LG9 513 aa21.99■■□□□ 1.11
PVT1-220ENST00000524165 PRKAG2Q9UGJ0 569 aa21.99■■□□□ 1.11
PVT1-220ENST00000524165 MYH2Q9UKX2 1941 aa21.99■■□□□ 1.11
PVT1-220ENST00000524165 IFIT1P09914 478 aaKnown RBP21.98■■□□□ 1.11
PVT1-220ENST00000524165 SHHQ15465 462 aa21.98■■□□□ 1.11
PVT1-220ENST00000524165 SH3BP5LQ7L8J4 393 aa21.98■■□□□ 1.11
PVT1-220ENST00000524165 KAZALD1Q96I82 304 aa21.98■■□□□ 1.11
PVT1-220ENST00000524165 ASCC2Q9H1I8 757 aaPredicted RBP21.98■■□□□ 1.11
PVT1-220ENST00000524165 ATAD5Q96QE3 1844 aa21.97■■□□□ 1.11
PVT1-220ENST00000524165 ZKSCAN1P17029 563 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms