RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 FAM221AA4D161 298 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 MEGF11A6BM72 1044 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 ZNF862O60290 1169 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 ID3Q02535 119 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 PDE4BQ07343 736 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 GRIK4Q16099 956 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 WIPI1Q5MNZ9 446 aaPredicted RBP6.05□□□□□ -1.44
SKP1-212ENST00000523966 MPRIPQ6WCQ1 1025 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 REC114Q7Z4M0 266 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 ALYREFQ86V81 257 aaKnown RBP6.05□□□□□ -1.44
SKP1-212ENST00000523966 SLITRK4Q8IW52 837 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 GMLQ99445 158 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 LRRC3Q9BY71 257 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 CEP41Q9BYV8 373 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 SSU72Q9NP77 194 aaKnown RBP6.05□□□□□ -1.44
SKP1-212ENST00000523966 GINM1Q9NU53 330 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 STRIP2Q9ULQ0 834 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 AP4E1Q9UPM8 1137 aa6.05□□□□□ -1.44
SKP1-212ENST00000523966 SYNGAP1Q96PV0 1343 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 PRAMEF27A3QJZ7 478 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 DCDC2CA8MYV0 355 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 STK10O94804 968 aaKnown RBP6.04□□□□□ -1.44
SKP1-212ENST00000523966 CTSBP07858 339 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 IMPDH2P12268 514 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 PTPN11Q06124 597 aaPredicted RBP6.04□□□□□ -1.44
SKP1-212ENST00000523966 GK5Q6ZS86 529 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 TMEM130Q8N3G9 435 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 FBXO27Q8NI29 283 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 UBXN4Q92575 508 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 WDR89Q96FK6 387 aaPredicted RBP6.04□□□□□ -1.44
SKP1-212ENST00000523966 WDR18Q9BV38 432 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 TMPRSS13Q9BYE2 586 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 ATXN3LQ9H3M9 355 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 AKTIPQ9H8T0 292 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 BRMS1Q9HCU9 246 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 CACNA2D2Q9NY47 1150 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 R3HCC1Q9Y3T6 440 aaKnown RBP6.04□□□□□ -1.44
SKP1-212ENST00000523966 CSADQ9Y600 493 aa6.04□□□□□ -1.44
SKP1-212ENST00000523966 RNF225M0QZC1 329 aaPredicted RBP6.03□□□□□ -1.44
SKP1-212ENST00000523966 TM4SF5O14894 197 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 GAS2O43903 313 aaKnown RBP6.03□□□□□ -1.44
SKP1-212ENST00000523966 WISP1O95388 367 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 CRKP46108 304 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 ETF1P62495 437 aaKnown RBP6.03□□□□□ -1.44
SKP1-212ENST00000523966 INPP5AQ14642 412 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 ANKRD34AQ69YU3 496 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 LRFN4Q6PJG9 635 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.03□□□□□ -1.44
SKP1-212ENST00000523966 KIAA1211Q6ZU35 1233 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 CDC37L1Q7L3B6 337 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 DYMQ7RTS9 669 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.03□□□□□ -1.44
SKP1-212ENST00000523966 C12orf40Q86WS4 652 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 REXO1Q8N1G1 1221 aaKnown RBP6.03□□□□□ -1.44
SKP1-212ENST00000523966 LENG1Q96BZ8 264 aaPredicted RBP6.03□□□□□ -1.44
SKP1-212ENST00000523966 PLPPR2Q96GM1 343 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 SUGCTQ9HAC7 445 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 PIDD1Q9HB75 910 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 PCDHB14Q9Y5E9 798 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 TACC3Q9Y6A5 838 aa6.03□□□□□ -1.44
SKP1-212ENST00000523966 F8W735 103 aaPredicted RBP6.02□□□□□ -1.45
SKP1-212ENST00000523966 GRIN3BO60391 1043 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 RNGTTO60942 597 aaKnown RBP6.02□□□□□ -1.45
SKP1-212ENST00000523966 DLGAP3O95886 979 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 GLB1P16278 677 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 PLCG1P19174 1290 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 SOX9P48436 509 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 USP11P51784 963 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 EIF6P56537 245 aaKnown RBP6.02□□□□□ -1.45
SKP1-212ENST00000523966 ERVK-24P63145 666 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 SOX4Q06945 474 aaPredicted RBP6.02□□□□□ -1.45
SKP1-212ENST00000523966 LRRFIP1Q32MZ4 808 aaKnown RBP6.02□□□□□ -1.45
SKP1-212ENST00000523966 ZC3H12AQ5D1E8 599 aaKnown RBP6.02□□□□□ -1.45
SKP1-212ENST00000523966 SOGA3Q5TF21 947 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 SHISA2Q6UWI4 295 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 SMG8Q8ND04 991 aaKnown RBP6.02□□□□□ -1.45
SKP1-212ENST00000523966 ARMC5Q96C12 935 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 HIRIP3Q9BW71 556 aaPredicted RBP6.02□□□□□ -1.45
SKP1-212ENST00000523966 YIPF2Q9BWQ6 316 aa6.02□□□□□ -1.45
SKP1-212ENST00000523966 SRRTQ9BXP5 876 aaKnown RBP6.02□□□□□ -1.45
SKP1-212ENST00000523966 PGRP06401 933 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 ADH5P11766 374 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 ASPAP45381 313 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 MCF2L2Q86YR7 1114 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 CKAP2LQ8IYA6 745 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 AGGF1Q8N302 714 aaeCLIP6.01□□□□□ -1.45
SKP1-212ENST00000523966 KCT2Q8NC54 265 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 ZNF507Q8TCN5 953 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 DHX38Q92620 1227 aaKnown RBP6.01□□□□□ -1.45
SKP1-212ENST00000523966 ANAPC16Q96DE5 110 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 CRIM1Q9NZV1 1036 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 HIF3AQ9Y2N7 669 aa6.01□□□□□ -1.45
SKP1-212ENST00000523966 GFRA2O00451 464 aa6□□□□□ -1.45
SKP1-212ENST00000523966 FANCGO15287 622 aa6□□□□□ -1.45
SKP1-212ENST00000523966 TMPRSS2O15393 492 aa6□□□□□ -1.45
SKP1-212ENST00000523966 ALX3O95076 343 aa6□□□□□ -1.45
SKP1-212ENST00000523966 DRD2P14416 443 aa6□□□□□ -1.45
SKP1-212ENST00000523966 SELPP16109 830 aa6□□□□□ -1.45
SKP1-212ENST00000523966 LORP23490 312 aaPredicted RBP6□□□□□ -1.45
SKP1-212ENST00000523966 IREB2P48200 963 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms