RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 OLFM4Q6UX06 510 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 BICDL1Q6ZP65 573 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 NME9Q86XW9 330 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 GPC2Q8N158 579 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 CRIPAKQ8N1N5 446 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 DEFB123Q8N688 67 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 TSEN2Q8NCE0 465 aaKnown RBP7.08□□□□□ -1.28
PABPC1-223ENST00000523636 HINFPQ9BQA5 517 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 R3HDMLQ9H3Y0 253 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 DCHS1Q96JQ0 3298 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 A6NJY4 79 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 LCE2BO14633 110 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 STAU1O95793 577 aaKnown RBP7.07□□□□□ -1.28
PABPC1-223ENST00000523636 SERPINB2P05120 415 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 FBLN1P23142 703 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 ATP2B4P23634 1241 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 FOXK2Q01167 660 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 RELBQ01201 579 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 OCLNQ16625 522 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 PKDCCQ504Y2 493 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 USPL1Q5W0Q7 1092 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 RGMBQ6NW40 437 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 ZNF622Q969S3 477 aaKnown RBP eCLIP7.07□□□□□ -1.28
PABPC1-223ENST00000523636 AGBL1Q96MI9 1066 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 NLRP3Q96P20 1036 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 ZNF408Q9H9D4 720 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 RAB6BQ9NRW1 208 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 CXXC1Q9P0U4 656 aaPredicted RBP7.07□□□□□ -1.28
PABPC1-223ENST00000523636 PGAP2Q9UHJ9 254 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 HDAC9Q9UKV0 1011 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 SBNO2Q9Y2G9 1366 aa7.07□□□□□ -1.28
PABPC1-223ENST00000523636 CGNL1Q0VF96 1302 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 CDK2AP1O14519 115 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 SPINT1O43278 529 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 IGFBP4P22692 258 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 HOXC9P31274 260 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 CAP1Q01518 475 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 PHLDB3Q6NSJ2 640 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 PRPF40BQ6NWY9 871 aaKnown RBP7.06□□□□□ -1.28
PABPC1-223ENST00000523636 USP50Q70EL3 339 aaPredicted RBP7.06□□□□□ -1.28
PABPC1-223ENST00000523636 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 STAG2Q8N3U4 1231 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 SCHIP1Q9P0W5 487 aaPredicted RBP7.06□□□□□ -1.28
PABPC1-223ENST00000523636 BCCIPQ9P287 314 aaKnown RBP eCLIP7.06□□□□□ -1.28
PABPC1-223ENST00000523636 SERTAD1Q9UHV2 236 aa7.06□□□□□ -1.28
PABPC1-223ENST00000523636 DMDP11532 3685 aa7.05□□□□□ -1.28
PABPC1-223ENST00000523636 GPR25O00155 361 aa7.05□□□□□ -1.28
PABPC1-223ENST00000523636 MEN1O00255 615 aa7.05□□□□□ -1.28
PABPC1-223ENST00000523636 CRKLP46109 303 aaKnown RBP7.05□□□□□ -1.28
PABPC1-223ENST00000523636 RNF144AP50876 292 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-223ENST00000523636 HIRAP54198 1017 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-223ENST00000523636 CENPCQ03188 943 aa7.05□□□□□ -1.28
PABPC1-223ENST00000523636 MAP3K12Q12852 859 aa7.05□□□□□ -1.28
PABPC1-223ENST00000523636 TLR1Q15399 786 aa7.05□□□□□ -1.28
PABPC1-223ENST00000523636 INTS3Q68E01 1043 aaKnown RBP7.05□□□□□ -1.28
PABPC1-223ENST00000523636 MRPL14Q6P1L8 145 aaKnown RBP7.05□□□□□ -1.28
PABPC1-223ENST00000523636 ZNF395Q9H8N7 513 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-223ENST00000523636 GNEQ9Y223 722 aaKnown RBP7.05□□□□□ -1.28
PABPC1-223ENST00000523636 DNAH12Q6ZR08 3092 aa7.04□□□□□ -1.28
PABPC1-223ENST00000523636 CFAP47Q6ZTR5 3102 aa7.04□□□□□ -1.28
PABPC1-223ENST00000523636 ALPK3Q96L96 1907 aa7.04□□□□□ -1.28
PABPC1-223ENST00000523636 PRMT3O60678 531 aa7.04□□□□□ -1.28
PABPC1-223ENST00000523636 NEFLP07196 543 aa7.04□□□□□ -1.28
PABPC1-223ENST00000523636 FKBP4Q02790 459 aaKnown RBP eCLIP7.04□□□□□ -1.28
PABPC1-223ENST00000523636 INTS5Q6P9B9 1019 aaKnown RBP7.04□□□□□ -1.28
PABPC1-223ENST00000523636 TAS1R3Q7RTX0 852 aa7.04□□□□□ -1.28
PABPC1-223ENST00000523636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.04□□□□□ -1.28
PABPC1-223ENST00000523636 COL26A1Q96A83 441 aa7.04□□□□□ -1.28
PABPC1-223ENST00000523636 ARMC5Q96C12 935 aa7.04□□□□□ -1.28
PABPC1-223ENST00000523636 CWC22Q9HCG8 908 aaKnown RBP7.04□□□□□ -1.28
PABPC1-223ENST00000523636 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
PABPC1-223ENST00000523636 KTN1Q86UP2 1357 aaKnown RBP7.04□□□□□ -1.28
PABPC1-223ENST00000523636 AXIN1O15169 862 aa7.03□□□□□ -1.28
PABPC1-223ENST00000523636 ARID4AP29374 1257 aaPredicted RBP7.03□□□□□ -1.28
PABPC1-223ENST00000523636 NOM1Q5C9Z4 860 aaKnown RBP7.03□□□□□ -1.28
PABPC1-223ENST00000523636 Q6ZNB5 142 aa7.03□□□□□ -1.28
PABPC1-223ENST00000523636 OTOP1Q7RTM1 612 aa7.03□□□□□ -1.28
PABPC1-223ENST00000523636 PPARGC1BQ86YN6 1023 aaKnown RBP7.03□□□□□ -1.28
PABPC1-223ENST00000523636 SLC9A9Q8IVB4 645 aa7.03□□□□□ -1.28
PABPC1-223ENST00000523636 PRIMPOLQ96LW4 560 aa7.03□□□□□ -1.28
PABPC1-223ENST00000523636 GRIP2Q9C0E4 1043 aa7.03□□□□□ -1.28
PABPC1-223ENST00000523636 TSPAN10Q9H1Z9 355 aaPredicted RBP7.03□□□□□ -1.28
PABPC1-223ENST00000523636 TMOD3Q9NYL9 352 aa7.03□□□□□ -1.28
PABPC1-223ENST00000523636 GJA3Q9Y6H8 435 aa7.03□□□□□ -1.28
PABPC1-223ENST00000523636 KDM3BQ7LBC6 1761 aa7.03□□□□□ -1.28
PABPC1-223ENST00000523636 SPTBN4Q9H254 2564 aa7.02□□□□□ -1.29
PABPC1-223ENST00000523636 MYO15AQ9UKN7 3530 aa7.02□□□□□ -1.29
PABPC1-223ENST00000523636 A0A1W2PPC1 479 aa7.02□□□□□ -1.29
PABPC1-223ENST00000523636 WTIPA6NIX2 430 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 PPM1GO15355 546 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 PTCD1O75127 700 aaKnown RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 BMP2P12643 396 aa7.02□□□□□ -1.29
PABPC1-223ENST00000523636 TATP17735 454 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 GTF2E1P29083 439 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 IARSP41252 1262 aaKnown RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 ZNF157P51786 506 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 PSMA6P60900 246 aaKnown RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 SCARF1Q14162 830 aa7.02□□□□□ -1.29
PABPC1-223ENST00000523636 SLC51AQ86UW1 340 aa7.02□□□□□ -1.29
PABPC1-223ENST00000523636 RASAL3Q86YV0 1011 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms