RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 AFG3L2Q9Y4W6 797 aa17.17■□□□□ 0.34
UBR5-207ENST00000520539 IRX1P78414 480 aaPredicted RBP17.16■□□□□ 0.34
UBR5-207ENST00000520539 CAMSAP2Q08AD1 1489 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 SERPINI1Q99574 410 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 ARHGAP6O43182 974 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 APOA1P02647 267 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 LRRC8BQ6P9F7 803 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 LEO1Q8WVC0 666 aaPredicted RBP17.16■□□□□ 0.34
UBR5-207ENST00000520539 HMOX1P09601 288 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 KRT80Q6KB66 452 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 ZSCAN29Q8IWY8 852 aaPredicted RBP17.16■□□□□ 0.34
UBR5-207ENST00000520539 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 TRIM37O94972 964 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 GNAQP50148 359 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 RASA3Q14644 834 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 CFAP61Q8NHU2 1237 aa17.16■□□□□ 0.34
UBR5-207ENST00000520539 PPWD1Q96BP3 646 aaKnown RBP17.16■□□□□ 0.34
UBR5-207ENST00000520539 MIS18AQ9NYP9 233 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 KRT10P13645 584 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 PALM2Q8IXS6 379 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 WWC3Q9ULE0 1092 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 SPZ1Q9BXG8 430 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 DCDC2Q9UHG0 476 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
UBR5-207ENST00000520539 CCDC169A6NNP5 214 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 EIF3CLB5ME19 914 aaKnown RBP17.15■□□□□ 0.34
UBR5-207ENST00000520539 POLR3DP05423 398 aaPredicted RBP17.15■□□□□ 0.34
UBR5-207ENST00000520539 MAN1A1P33908 653 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 EIF3CQ99613 913 aaKnown RBP17.15■□□□□ 0.34
UBR5-207ENST00000520539 KRT75O95678 551 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.15■□□□□ 0.34
UBR5-207ENST00000520539 MFSD6Q6ZSS7 791 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 APLFQ8IW19 511 aaPredicted RBP17.15■□□□□ 0.34
UBR5-207ENST00000520539 MCF2P10911 925 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 NCOA7Q8NI08 942 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 TBC1D32Q96NH3 1257 aa17.15■□□□□ 0.34
UBR5-207ENST00000520539 ATP8B1O43520 1251 aa17.14■□□□□ 0.34
UBR5-207ENST00000520539 CTNNA1P35221 906 aaKnown RBP17.14■□□□□ 0.34
UBR5-207ENST00000520539 ZNF710Q8N1W2 664 aa17.14■□□□□ 0.34
UBR5-207ENST00000520539 DBNLQ9UJU6 430 aaKnown RBP17.14■□□□□ 0.34
UBR5-207ENST00000520539 MINK1Q8N4C8 1332 aaPredicted RBP17.14■□□□□ 0.33
UBR5-207ENST00000520539 ATP6V0A4Q9HBG4 840 aa17.14■□□□□ 0.33
UBR5-207ENST00000520539 TMTC1Q8IUR5 882 aa17.14■□□□□ 0.33
UBR5-207ENST00000520539 TTI1O43156 1089 aa17.14■□□□□ 0.33
UBR5-207ENST00000520539 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
UBR5-207ENST00000520539 CCDC197Q8NCU1 140 aa17.14■□□□□ 0.33
UBR5-207ENST00000520539 EPB41P11171 864 aaKnown RBP17.14■□□□□ 0.33
UBR5-207ENST00000520539 EP400NLQ6ZTU2 488 aa17.14■□□□□ 0.33
UBR5-207ENST00000520539 SECISBP2LQ93073 1101 aaKnown RBP17.14■□□□□ 0.33
UBR5-207ENST00000520539 ASIC3Q9UHC3 531 aa17.14■□□□□ 0.33
UBR5-207ENST00000520539 ADAMTS8Q9UP79 889 aa17.14■□□□□ 0.33
UBR5-207ENST00000520539 ARHGAP44Q17R89 818 aa17.14■□□□□ 0.33
UBR5-207ENST00000520539 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
UBR5-207ENST00000520539 C4BPBP20851 252 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 WDR44Q5JSH3 913 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 SYT10Q6XYQ8 523 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 TMTC3Q6ZXV5 915 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 SERPINB2P05120 415 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 MMEL1Q495T6 779 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 JRKLQ9Y4A0 524 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 IFIT3O14879 490 aaKnown RBP17.13■□□□□ 0.33
UBR5-207ENST00000520539 SH3GL2Q99962 352 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 DNAJC17Q9NVM6 304 aaKnown RBP17.13■□□□□ 0.33
UBR5-207ENST00000520539 CCDC78A2IDD5 438 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 CALM1P0DP23 149 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 CALM2P0DP24 149 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 CALM3P0DP25 149 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 KRT12Q99456 494 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 AMOTL2Q9Y2J4 779 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 KDM1AO60341 852 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 FLOT2Q14254 428 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 BBOF1Q8ND07 529 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 PTPRCP08575 1304 aa17.13■□□□□ 0.33
UBR5-207ENST00000520539 ELF2Q15723 593 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 DDX41Q9UJV9 622 aaKnown RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 SLC5A1P13866 664 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 ASPHQ12797 758 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 CNNM4Q6P4Q7 775 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 NBPF3Q9H094 633 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 ANKRD12Q6UB98 2062 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 IFIT1P09914 478 aaKnown RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 MMS22LQ6ZRQ5 1243 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 NSMCE1Q8WV22 266 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 MRPS26Q9BYN8 205 aaKnown RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 RRP15Q9Y3B9 282 aaKnown RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 EEF1B2P24534 225 aaKnown RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 BASP1P80723 227 aaKnown RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 NAP1L4Q99733 375 aaKnown RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 IPO11Q9UI26 975 aaKnown RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 TMEM110-MUSTN1A8MSY1 372 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 ZNF280CQ8ND82 737 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 ZKSCAN3Q9BRR0 538 aa17.12■□□□□ 0.33
UBR5-207ENST00000520539 MRPL40Q9NQ50 206 aaKnown RBP17.12■□□□□ 0.33
UBR5-207ENST00000520539 TAF11Q15544 211 aa17.11■□□□□ 0.33
UBR5-207ENST00000520539 OGFOD1Q8N543 542 aa17.11■□□□□ 0.33
UBR5-207ENST00000520539 TRIM58Q8NG06 486 aa17.11■□□□□ 0.33
UBR5-207ENST00000520539 SNX21Q969T3 373 aa17.11■□□□□ 0.33
UBR5-207ENST00000520539 KRT5P13647 590 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms