RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 GSTO1P78417 241 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 UBE3CQ15386 1083 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 CCDC43Q96MW1 224 aaKnown RBP12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 ACBD3Q9H3P7 528 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 SALL3Q9BXA9 1300 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 N4BP3O15049 544 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 SETQ01105 290 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 PDIA6Q15084 440 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 PYM1Q9BRP8 204 aaKnown RBP12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 GNG11P61952 73 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 RRAGBQ5VZM2 374 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 HEATR3Q7Z4Q2 680 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 ANKRD2Q9GZV1 360 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 DNAI1Q9UI46 699 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 CCDC12Q8WUD4 166 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB4-201ENST00000519479 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 HIBADHP31937 336 aaKnown RBP12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 STX17P56962 302 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 RABL6Q3YEC7 729 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 CRACR2BQ8N4Y2 399 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 SPATA31A1Q5TZJ5 1347 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 CUTAO60888 179 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 RESTQ13127 1097 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 CCDC96Q2M329 555 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 TMCO3Q6UWJ1 677 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 KIAA1468Q9P260 1216 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 CLIC4Q9Y696 253 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 GNAQP50148 359 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 KIAA1328Q86T90 577 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 SYNE4Q8N205 404 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 CEP89Q96ST8 783 aa12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 V9GYY5 206 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB4-201ENST00000519479 POLR2DO15514 142 aaKnown RBP12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 PFKFB1P16118 471 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 TERF1P54274 439 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 PDE4CQ08493 712 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 LRMPQ12912 555 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 ZNF174Q15697 407 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 HLFQ16534 295 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 CMTR1Q8N1G2 835 aaKnown RBP12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 ZMYM6O95789 1325 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 hCG_1642624A0A1W2PR95 340 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 CHGBP05060 677 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 LDHBP07195 334 aaKnown RBP12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 MCM7P33993 719 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 ADD2P35612 726 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 GYG1P46976 350 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 FOXO4P98177 505 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 CALML3P27482 149 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 STAT6P42226 847 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 NDUFA8P51970 172 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 NLRP12P59046 1061 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 CNBD1Q8NA66 436 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 RCOR1Q9UKL0 485 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 WWC3Q9ULE0 1092 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 GOLGA6L9A6NEM1 432 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 RBM28Q9NW13 759 aaKnown RBP12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 AATFQ9NY61 560 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDHGB4-201ENST00000519479 VWA3AA6NCI4 1184 aa12.83□□□□□ -0.35
PCDHGB4-201ENST00000519479 CRKLP46109 303 aaKnown RBP12.83□□□□□ -0.35
PCDHGB4-201ENST00000519479 FANCCQ00597 558 aa12.83□□□□□ -0.35
PCDHGB4-201ENST00000519479 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.35
PCDHGB4-201ENST00000519479 SDR42E1Q8WUS8 393 aa12.83□□□□□ -0.35
PCDHGB4-201ENST00000519479 RAB34Q9BZG1 259 aa12.83□□□□□ -0.35
PCDHGB4-201ENST00000519479 PPARAQ07869 468 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 TMEM266Q2M3C6 531 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 APOA5Q6Q788 366 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZNF804AQ7Z570 1209 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 MYRIPQ8NFW9 859 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 RTEL1Q9NZ71 1219 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 SPATA31A5Q5VU36 1347 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 SPATA31A7Q8IWB4 1347 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 IDEP14735 1019 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZNF654Q8IZM8 581 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 KAZALD1Q96I82 304 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 CHRNDQ07001 517 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 CCDC178Q5BJE1 867 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 RMND1Q9NWS8 449 aa12.83□□□□□ -0.36
PCDHGB4-201ENST00000519479 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 A0A087WWV3 80 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 ERLIN1O75477 346 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZNF397Q8NF99 534 aaPredicted RBP12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 MCAMP43121 646 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 FKBP15Q5T1M5 1219 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 TAF3Q5VWG9 929 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 CALML4Q96GE6 196 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 TRIM47Q96LD4 638 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 CTAGE1Q96RT6 745 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms