RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 TTC41PQ6P2S7 1318 aa7.14□□□□□ -1.27
CD47-205ENST00000517766 SEPT12Q8IYM1 358 aa7.14□□□□□ -1.27
CD47-205ENST00000517766 CLASRPQ8N2M8 674 aaKnown RBP7.14□□□□□ -1.27
CD47-205ENST00000517766 LARGE2Q8N3Y3 721 aa7.14□□□□□ -1.27
CD47-205ENST00000517766 SUCLG2Q96I99 432 aa7.14□□□□□ -1.27
CD47-205ENST00000517766 PRIMPOLQ96LW4 560 aa7.14□□□□□ -1.27
CD47-205ENST00000517766 CICQ96RK0 1608 aaPredicted RBP7.14□□□□□ -1.27
CD47-205ENST00000517766 ZNF831Q5JPB2 1677 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 USP42Q9H9J4 1324 aaKnown RBP7.13□□□□□ -1.27
CD47-205ENST00000517766 ERC2O15083 957 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 EPB41L2O43491 1005 aaKnown RBP7.13□□□□□ -1.27
CD47-205ENST00000517766 REC8O95072 547 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 ADAMTS2O95450 1211 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 MYCP01106 439 aaPredicted RBP7.13□□□□□ -1.27
CD47-205ENST00000517766 SEC13P55735 322 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 G3BP1Q13283 466 aaKnown RBP eCLIP7.13□□□□□ -1.27
CD47-205ENST00000517766 DDB1Q16531 1140 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 PHLDB3Q6NSJ2 640 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 NBPF10Q6P3W6 841 aaKnown RBP7.13□□□□□ -1.27
CD47-205ENST00000517766 HSCBQ8IWL3 235 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 NBPF15Q8N660 670 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.13□□□□□ -1.27
CD47-205ENST00000517766 OTUD7AQ8TE49 926 aaPredicted RBP7.13□□□□□ -1.27
CD47-205ENST00000517766 PIGBQ92521 554 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 SNX21Q969T3 373 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 GPATCH3Q96I76 525 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 HINFPQ9BQA5 517 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 ATG3Q9NT62 314 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 MAP4K5Q9Y4K4 846 aa7.13□□□□□ -1.27
CD47-205ENST00000517766 JCADQ9P266 1359 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 SPATA31A5Q5VU36 1347 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 SPATA31A7Q8IWB4 1347 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 H7C1W4 665 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 PTCD1O75127 700 aaKnown RBP7.12□□□□□ -1.27
CD47-205ENST00000517766 A1BGP04217 495 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 KCNA1Q09470 495 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 RABL6Q3YEC7 729 aaPredicted RBP7.12□□□□□ -1.27
CD47-205ENST00000517766 HSP90AB3PQ58FF7 597 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 KIF6Q6ZMV9 814 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 CNTROBQ8N137 903 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 SIX5Q8N196 739 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 CCDC191Q8NCU4 936 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 KAZALD1Q96I82 304 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 CDK15Q96Q40 435 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 BCL11AQ9H165 835 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 BICC1Q9H694 974 aaKnown RBP7.12□□□□□ -1.27
CD47-205ENST00000517766 IL1RAPL2Q9NP60 686 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 CWC25Q9NXE8 425 aaPredicted RBP7.12□□□□□ -1.27
CD47-205ENST00000517766 RREB1Q92766 1687 aa7.12□□□□□ -1.27
CD47-205ENST00000517766 A0A087WZG4 1122 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 UBAP1LF5GYI3 381 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 GLRX3O76003 335 aaKnown RBP7.11□□□□□ -1.27
CD47-205ENST00000517766 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 ALDH1A1P00352 501 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 NR3C2P08235 984 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 IFIT2P09913 472 aaKnown RBP7.11□□□□□ -1.27
CD47-205ENST00000517766 MCCP23508 829 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 ATP2B4P23634 1241 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 CASP7P55210 303 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 PIP4K2BP78356 416 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
CD47-205ENST00000517766 TCIRG1Q13488 830 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 DNAJC10Q8IXB1 793 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 ZNF784Q8NCA9 323 aaPredicted RBP7.11□□□□□ -1.27
CD47-205ENST00000517766 TSEN2Q8NCE0 465 aaKnown RBP7.11□□□□□ -1.27
CD47-205ENST00000517766 RILPL2Q969X0 211 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 ZFP42Q96MM3 310 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 USP26Q9BXU7 913 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 COPRSQ9NQ92 184 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 ASAP1Q9ULH1 1129 aa7.11□□□□□ -1.27
CD47-205ENST00000517766 SPATA31A6Q5VVP1 1343 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 ADH1CP00326 375 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 SSFA2P28290 1259 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 PIP4K2AP48426 406 aaPredicted RBP7.1□□□□□ -1.27
CD47-205ENST00000517766 RABEP1Q15276 862 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 PPP1R26Q5T8A7 1209 aaPredicted RBP7.1□□□□□ -1.27
CD47-205ENST00000517766 TMCO4Q5TGY1 634 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 CC2D2BQ6DHV5 1058 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 TTLL7Q6ZT98 887 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 UBE3BQ7Z3V4 1068 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 UNC5CLQ8IV45 518 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 CCDC116Q8IYX3 515 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 PI4K2BQ8TCG2 481 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 CLP1Q92989 425 aaKnown RBP7.1□□□□□ -1.27
CD47-205ENST00000517766 ISCA1Q9BUE6 129 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 ECHDC1Q9NTX5 307 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 SERTAD1Q9UHV2 236 aa7.1□□□□□ -1.27
CD47-205ENST00000517766 CCDC9Q9Y3X0 531 aaKnown RBP7.1□□□□□ -1.27
CD47-205ENST00000517766 COL5A3P25940 1745 aaPredicted RBP7.1□□□□□ -1.27
CD47-205ENST00000517766 MAP3K15Q6ZN16 1313 aa7.09□□□□□ -1.27
CD47-205ENST00000517766 HIP1O00291 1037 aa7.09□□□□□ -1.27
CD47-205ENST00000517766 SASH1O94885 1247 aa7.09□□□□□ -1.27
CD47-205ENST00000517766 CYP19A1P11511 503 aaPredicted RBP7.09□□□□□ -1.27
CD47-205ENST00000517766 CHMLP26374 656 aa7.09□□□□□ -1.27
CD47-205ENST00000517766 ADD1P35611 737 aaKnown RBP7.09□□□□□ -1.27
CD47-205ENST00000517766 IL6STP40189 918 aaPredicted RBP7.09□□□□□ -1.27
CD47-205ENST00000517766 RFX5P48382 616 aaPredicted RBP7.09□□□□□ -1.27
CD47-205ENST00000517766 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
CD47-205ENST00000517766 VPS72Q15906 364 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms