RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TRHDEQ9UKU6 1024 aa4.92□□□□□ -1.62
RNU4-60P-201ENST00000517239 TPX2Q9ULW0 747 aaKnown RBP4.92□□□□□ -1.62
RNU4-60P-201ENST00000517239 GTF2A1LQ9UNN4 478 aa4.92□□□□□ -1.62
RNU4-60P-201ENST00000517239 FAM50BQ9Y247 325 aa4.92□□□□□ -1.62
RNU4-60P-201ENST00000517239 PCDHB5Q9Y5E4 795 aa4.92□□□□□ -1.62
RNU4-60P-201ENST00000517239 KCNMB2Q9Y691 235 aa4.92□□□□□ -1.62
RNU4-60P-201ENST00000517239 SETD1BQ9UPS6 1966 aaKnown RBP4.92□□□□□ -1.62
RNU4-60P-201ENST00000517239 POTEB3A0JP26 581 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 GPR39O43194 453 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 ANP32CO43423 234 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 ARAFP10398 606 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 FSHRP23945 695 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 SERPINB3P29508 390 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 HTR3AP46098 478 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 BCAMP50895 628 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 ARSDP51689 593 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 RASSF7Q02833 373 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 CHAF1AQ13111 956 aaPredicted RBP4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 MPP2Q14168 576 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 STAT4Q14765 748 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 HIF1AQ16665 826 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 FAM209AQ5JX71 171 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 CXorf57Q6NSI4 855 aaKnown RBP4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 POTEBQ6S5H4 581 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 TRIM42Q8IWZ5 723 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 ZNF295-AS1Q8N0V1 137 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 AHI1Q8N157 1196 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 LRRC47Q8N1G4 583 aaKnown RBP4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 ANKK1Q8NFD2 765 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 AIDAQ96BJ3 306 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 SUSD3Q96L08 255 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 SCLT1Q96NL6 688 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 IPO9Q96P70 1041 aaKnown RBP4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 STRBPQ96SI9 672 aaKnown RBP4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 CDC6Q99741 560 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 ELAC2Q9BQ52 826 aaKnown RBP4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 HERPUD2Q9BSE4 406 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 RHOBTB2Q9BYZ6 727 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 LIN7BQ9HAP6 207 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 ABCB6Q9NP58 842 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 LUC7LQ9NQ29 371 aaKnown RBP4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 PRDM11Q9NQV5 511 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 C9orf78Q9NZ63 289 aaPredicted RBP4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 ZNF69Q9UC07 566 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 HRH3Q9Y5N1 445 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 TNKSO95271 1327 aa4.91□□□□□ -1.62
RNU4-60P-201ENST00000517239 FAM221AA4D161 298 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 IQCA1LA6NCM1 817 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 SOWAHBA6NEL2 793 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 GOLGA8CPA6NN73 597 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 APAF1O14727 1248 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 GABRDO14764 452 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 PIP5K1CO60331 668 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 ABLIM3O94929 683 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 PGRP06401 933 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 POTEIP0CG38 1075 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 GTF2E1P29083 439 aaPredicted RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 CASP2P42575 452 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 DGKGP49619 791 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 NEK4P51957 841 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 PCBP1Q15365 356 aaKnown RBP eCLIP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 MINDY4Q4G0A6 757 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 PPP1R26Q5T8A7 1209 aaPredicted RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 TMEM214Q6NUQ4 689 aaKnown RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 C1orf228Q6PIY5 440 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 ANKRD13DQ6ZTN6 518 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 CCDC84Q86UT8 332 aaPredicted RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 NLRP8Q86W28 1048 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 SKAP1Q86WV1 359 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 CNTD1Q8N815 330 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 ENOX1Q8TC92 643 aaKnown RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 USP33Q8TEY7 942 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 KISS1RQ969F8 398 aaPredicted RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 HSH2DQ96JZ2 352 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 EXOC2Q96KP1 924 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 DHRS4Q9BTZ2 278 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 FHDC1Q9C0D6 1143 aaPredicted RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 PUS7LQ9H0K6 701 aaKnown RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 MIR1-1HGQ9H1L0 117 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 DZANK1Q9NVP4 752 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 ABI2Q9NYB9 513 aaPredicted RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 FCF1Q9Y324 198 aaKnown RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 LUC7L2Q9Y383 392 aaKnown RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 SPEF1Q9Y4P9 236 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 PCDHB14Q9Y5E9 798 aa4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.9□□□□□ -1.63
RNU4-60P-201ENST00000517239 KAT6BQ8WYB5 2073 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 UPK3BL1B0FP48 263 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 PRRT4C9JH25 899 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 UPK3BL2E5RIL1 263 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 MEN1O00255 615 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 ENC1O14682 589 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 NBNO60934 754 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 PAGE1O75459 146 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 CYP2E1P05181 493 aaPredicted RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 NEFMP07197 916 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 U2AF1L5P0DN76 240 aaPredicted RBP4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 EDN3P14138 238 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 CCND1P24385 295 aa4.89□□□□□ -1.63
RNU4-60P-201ENST00000517239 INPP5BP32019 993 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms