RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 SRGAP3O43295 1099 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 CENPBP07199 599 aaPredicted RBP7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 GPSM2P81274 684 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ATP8B2P98198 1209 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 MAP7D1Q3KQU3 841 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 DPP8Q6V1X1 898 aaPredicted RBP7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 SLC51AQ86UW1 340 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ANKMY2Q8IV38 441 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 KLHDC4Q8TBB5 520 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 CRBNQ96SW2 442 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 TAOK3Q9H2K8 898 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ZNF277Q9NRM2 450 aaPredicted RBP7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 BSDC1Q9NW68 430 aaPredicted RBP7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PCDH10Q9P2E7 1040 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 MINPP1Q9UNW1 487 aa7.2□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ANKRD31Q8N7Z5 1873 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 TAF5LO75529 589 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ARID4AP29374 1257 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 KCNJ4P48050 445 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 IRX6P78412 446 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 FKBP4Q02790 459 aaKnown RBP eCLIP7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 RASSF7Q02833 373 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 CHRNDQ07001 517 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 EML3Q32P44 896 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PTCRAQ6ISU1 281 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 OGFOD1Q8N543 542 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 SUPT20HQ8NEM7 779 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PUS3Q9BZE2 481 aaKnown RBP7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ZC3H12CQ9C0D7 883 aaKnown RBP7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ANKRD2Q9GZV1 360 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 SIL1Q9H173 461 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 KIF13BQ9NQT8 1826 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 RTL9Q8NET4 1388 aa7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 TNRC6CQ9HCJ0 1690 aaKnown RBP7.19□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PNMA6EA0A0J9YXQ4 647 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 EYA2O00167 538 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 NFKBIEO00221 500 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PPIP5K2O43314 1243 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 LMNB1P20700 586 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 RFX5P48382 616 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PTPN12Q05209 780 aaKnown RBP7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 G3BP1Q13283 466 aaKnown RBP eCLIP7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 LRRC24Q50LG9 513 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 METTL24Q5JXM2 366 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 C9orf131Q5VYM1 1079 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 TRAF7Q6Q0C0 670 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 RPAP2Q8IXW5 612 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 LARGE2Q8N3Y3 721 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 TBC1D16Q8TBP0 767 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 CLP1Q92989 425 aaKnown RBP7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 EYA3Q99504 573 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 UNC93B1Q9H1C4 597 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ZBTB40Q9NUA8 1239 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 RNF181Q9P0P0 153 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 GGA1Q9UJY5 639 aa7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PA2G4Q9UQ80 394 aaKnown RBP7.18□□□□□ -1.26
SCARNA6.1-201ENST00000516989 SLX4Q8IY92 1834 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 WTIPA6NIX2 430 aaPredicted RBP7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 SURF6O75683 361 aaKnown RBP7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 UFL1O94874 794 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ADH1BP00325 375 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ATP2B4P23634 1241 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 IARSP41252 1262 aaKnown RBP7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 DPYDQ12882 1025 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 OS9Q13438 667 aaPredicted RBP7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 MTX1Q13505 466 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 CEP85Q6P2H3 762 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 SH3BP5LQ7L8J4 393 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 TRIM50Q86XT4 487 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 JDP2Q8WYK2 163 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 GPR101Q96P66 508 aaPredicted RBP7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PSMD1Q99460 953 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 COPRSQ9NQ92 184 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 POLLQ9UGP5 575 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 NOD1Q9Y239 953 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 LEMD3Q9Y2U8 911 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 RIPOR2Q9Y4F9 1068 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 ZNF804BA4D1E1 1349 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 XDHP47989 1333 aa7.17□□□□□ -1.26
SCARNA6.1-201ENST00000516989 DDX60Q8IY21 1712 aaKnown RBP7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 SNAP23O00161 211 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 TLL1O43897 1013 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 HMMRO75330 724 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 IL15P40933 162 aaPredicted RBP7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PRELPP51888 382 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 CLDN10P78369 228 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 AOC3Q16853 763 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 EXOC6Q8TAG9 804 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 SSH3Q8TE77 659 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 RTFDC1Q9BY42 306 aaPredicted RBP7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 BCL11AQ9H165 835 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 DNAAF2Q9NVR5 837 aaKnown RBP7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 MROH5Q6ZUA9 1318 aa7.16□□□□□ -1.26
SCARNA6.1-201ENST00000516989 COL11A2P13942 1736 aaPredicted RBP7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 KIAA1551Q9HCM1 1747 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 TAF1P21675 1872 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 MAGEB6P1A0A0J9YX57 407 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 CIAO1O76071 339 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 PDE8BO95263 885 aa7.15□□□□□ -1.26
SCARNA6.1-201ENST00000516989 YY1P25490 414 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms