RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 TSPAN6O43657 245 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 SLC19A1P41440 591 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 NFKB2Q00653 900 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 LRRC14Q15048 493 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 TTF1Q15361 905 aaPredicted RBP8.9□□□□□ -0.98
NPHP3-211ENST00000515289 HGSNATQ68CP4 663 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.9□□□□□ -0.98
NPHP3-211ENST00000515289 RUFY4Q6ZNE9 571 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 TICAM2Q86XR7 235 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 NXPE3Q969Y0 559 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 GRIN2AQ12879 1464 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 MEIS3P2A8K0S8 358 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 UPK3BL1B0FP48 263 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 UPK3BL2E5RIL1 263 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 IRS4O14654 1257 aaPredicted RBP8.89□□□□□ -0.99
NPHP3-211ENST00000515289 ADCY3O60266 1144 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 PDE8AO60658 829 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 NME2P22392 152 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 GUCY2CP25092 1073 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 PLAURQ03405 335 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 PABPC4Q13310 644 aaKnown RBP eCLIP8.89□□□□□ -0.99
NPHP3-211ENST00000515289 LRRFIP1Q32MZ4 808 aaKnown RBP8.89□□□□□ -0.99
NPHP3-211ENST00000515289 MAP9Q49MG5 647 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 RNF180Q86T96 592 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 WDR75Q8IWA0 830 aaKnown RBP8.89□□□□□ -0.99
NPHP3-211ENST00000515289 LINC00528Q8N1L1 170 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 ZBTB38Q8NAP3 1195 aaPredicted RBP8.89□□□□□ -0.99
NPHP3-211ENST00000515289 EFCC1Q9HA90 598 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 SLC12A7Q9Y666 1083 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 IQGAP2Q13576 1575 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 UGGT2Q9NYU1 1516 aa8.89□□□□□ -0.99
NPHP3-211ENST00000515289 CFAP43Q8NDM7 1665 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 WASHC2CQ9Y4E1 1318 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 CAND2O75155 1236 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 TRPA1O75762 1119 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 MAP3K6O95382 1288 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 RPL6Q02878 288 aaKnown RBP8.88□□□□□ -0.99
NPHP3-211ENST00000515289 NCAPHQ15003 741 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 PPP2R5AQ15172 486 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 AKAP4Q5JQC9 854 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 SCARA3Q6AZY7 606 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 TSHZ1Q6ZSZ6 1077 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 LRRC47Q8N1G4 583 aaKnown RBP8.88□□□□□ -0.99
NPHP3-211ENST00000515289 TAB3Q8N5C8 712 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-211ENST00000515289 GAL3ST3Q96A11 431 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 HHIPQ96QV1 700 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 APBA2Q99767 749 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 EPN3Q9H201 632 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 MAPRE3Q9UPY8 281 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 POLR3KQ9Y2Y1 108 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-211ENST00000515289 FMN1Q68DA7 1419 aa8.88□□□□□ -0.99
NPHP3-211ENST00000515289 KIAA0586Q9BVV6 1533 aa8.87□□□□□ -0.99
NPHP3-211ENST00000515289 UPP2O95045 317 aa8.87□□□□□ -0.99
NPHP3-211ENST00000515289 FAM157BP0CG42 384 aa8.87□□□□□ -0.99
NPHP3-211ENST00000515289 FAM50AQ14320 339 aaKnown RBP8.87□□□□□ -0.99
NPHP3-211ENST00000515289 LCE2DQ5TA82 110 aaPredicted RBP8.87□□□□□ -0.99
NPHP3-211ENST00000515289 SPRYD7Q5W111 196 aa8.87□□□□□ -0.99
NPHP3-211ENST00000515289 LLGL2Q6P1M3 1020 aa8.87□□□□□ -0.99
NPHP3-211ENST00000515289 SYNJ2O15056 1496 aa8.87□□□□□ -0.99
NPHP3-211ENST00000515289 LRRC9Q6ZRR7 1453 aa8.87□□□□□ -0.99
NPHP3-211ENST00000515289 RRBP1Q9P2E9 1410 aaKnown RBP8.87□□□□□ -0.99
NPHP3-211ENST00000515289 IQCA1LA6NCM1 817 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 GSG1L2A8MUP6 293 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 J3QL48 77 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 PDE2AO00408 941 aaPredicted RBP8.86□□□□□ -0.99
NPHP3-211ENST00000515289 EFSO43281 561 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 PLIN1O60240 522 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 AFAP1L2Q8N4X5 818 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 ASAP3Q8TDY4 903 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 PNMA5Q96PV4 448 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 KIF2CQ99661 725 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 RUBCNLQ9H714 662 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 PKD2L1Q9P0L9 805 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 NUP160Q12769 1436 aa8.86□□□□□ -0.99
NPHP3-211ENST00000515289 NFKB1P19838 968 aa8.85□□□□□ -0.99
NPHP3-211ENST00000515289 SFSWAPQ12872 951 aaKnown RBP8.85□□□□□ -0.99
NPHP3-211ENST00000515289 HLTFQ14527 1009 aaKnown RBP eCLIP8.85□□□□□ -0.99
NPHP3-211ENST00000515289 WWC2Q6AWC2 1192 aa8.85□□□□□ -0.99
NPHP3-211ENST00000515289 SULF2Q8IWU5 870 aa8.85□□□□□ -0.99
NPHP3-211ENST00000515289 UBA5Q9GZZ9 404 aa8.85□□□□□ -0.99
NPHP3-211ENST00000515289 CLEC4MQ9H2X3 399 aaPredicted RBP8.85□□□□□ -0.99
NPHP3-211ENST00000515289 NCOA5Q9HCD5 579 aaKnown RBP8.85□□□□□ -0.99
NPHP3-211ENST00000515289 COMMD10Q9Y6G5 202 aa8.85□□□□□ -0.99
NPHP3-211ENST00000515289 CEP170Q5SW79 1584 aa8.85□□□□□ -0.99
NPHP3-211ENST00000515289 B3GALT4O96024 378 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 RHOQP17081 205 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 ZNF157P51786 506 aaPredicted RBP8.84□□□□□ -0.99
NPHP3-211ENST00000515289 MCL1Q07820 350 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 HDAC1Q13547 482 aaPredicted RBP8.84□□□□□ -0.99
NPHP3-211ENST00000515289 CBX2Q14781 532 aaPredicted RBP8.84□□□□□ -0.99
NPHP3-211ENST00000515289 SLC10A6Q3KNW5 377 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 FNDC3BQ53EP0 1204 aaKnown RBP8.84□□□□□ -0.99
NPHP3-211ENST00000515289 ZNF697Q5TEC3 545 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 VHLLQ6RSH7 139 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 APBB1IPQ7Z5R6 666 aaPredicted RBP8.84□□□□□ -0.99
NPHP3-211ENST00000515289 TMEM40Q8WWA1 233 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 RUSC1Q9BVN2 902 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 EMILIN2Q9BXX0 1053 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 GPAMQ9HCL2 828 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms