RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 UTP14AQ9BVJ6 771 aaKnown RBP14.52□□□□□ -0.08
SDHA-216ENST00000514027 CCDC87Q9NVE4 849 aa14.52□□□□□ -0.08
SDHA-216ENST00000514027 ARAP2Q8WZ64 1704 aa14.52□□□□□ -0.09
SDHA-216ENST00000514027 BIN1O00499 593 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 VPS37DQ86XT2 251 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 IFNL3Q8IZI9 196 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 TMEM87BQ96K49 555 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 NAT10Q9H0A0 1025 aaKnown RBP14.51□□□□□ -0.09
SDHA-216ENST00000514027 GEMIN8Q9NWZ8 242 aaKnown RBP14.51□□□□□ -0.09
SDHA-216ENST00000514027 ERICH4A6NGS2 130 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 IFIT3O14879 490 aaKnown RBP14.51□□□□□ -0.09
SDHA-216ENST00000514027 ADAMTS2O95450 1211 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 TDO2P48775 406 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 BCAMP50895 628 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 EIF5P55010 431 aaKnown RBP14.51□□□□□ -0.09
SDHA-216ENST00000514027 KRT40Q6A162 431 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 SARM1Q6SZW1 724 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 CACTINQ8WUQ7 758 aaKnown RBP14.51□□□□□ -0.09
SDHA-216ENST00000514027 C16orf45Q96MC5 204 aaPredicted RBP14.51□□□□□ -0.09
SDHA-216ENST00000514027 LY9Q9HBG7 655 aa14.51□□□□□ -0.09
SDHA-216ENST00000514027 COL16A1Q07092 1604 aaPredicted RBP14.5□□□□□ -0.09
SDHA-216ENST00000514027 PATL2C9JE40 543 aaKnown RBP14.5□□□□□ -0.09
SDHA-216ENST00000514027 PRKAB2O43741 272 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 PFKFB1P16118 471 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 CDC25BP30305 580 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 IGHMBP2P38935 993 aaKnown RBP14.5□□□□□ -0.09
SDHA-216ENST00000514027 IARSP41252 1262 aaKnown RBP14.5□□□□□ -0.09
SDHA-216ENST00000514027 TRIM29Q14134 588 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 DPCR1Q3MIW9 517 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 INTS5Q6P9B9 1019 aaKnown RBP14.5□□□□□ -0.09
SDHA-216ENST00000514027 FEZ2Q9UHY8 353 aaPredicted RBP14.5□□□□□ -0.09
SDHA-216ENST00000514027 IQSEC3Q9UPP2 1182 aaPredicted RBP14.5□□□□□ -0.09
SDHA-216ENST00000514027 NIP7Q9Y221 180 aaKnown RBP eCLIP14.5□□□□□ -0.09
SDHA-216ENST00000514027 MROH7-TTC4A0A0A0MT08 1334 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 ECM29Q5VYK3 1845 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 CHD4Q14839 1912 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 CCDC69A6NI79 296 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 UBE2Q2LH0YL09 131 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 ZNF202O95125 648 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 DDB1Q16531 1140 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 CCDC152Q4G0S7 254 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 FILIP1Q7Z7B0 1213 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 MIGA1Q8NAN2 632 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 IGDCC4Q8TDY8 1250 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 ZBTB9Q96C00 473 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 ZKSCAN3Q9BRR0 538 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 SLC26A6Q9BXS9 759 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 EFCC1Q9HA90 598 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 ZSWIM5Q9P217 1185 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 KIAA1468Q9P260 1216 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 SLC12A7Q9Y666 1083 aa14.5□□□□□ -0.09
SDHA-216ENST00000514027 SLC3A2P08195 630 aaKnown RBP14.49□□□□□ -0.09
SDHA-216ENST00000514027 ARID5BQ14865 1188 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 KRT222Q8N1A0 295 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 LCORLQ8N3X6 602 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 MRFAP1L1Q96HT8 127 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 AK7Q96M32 723 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 SLC4A4Q9Y6R1 1079 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 LTBP4Q8N2S1 1624 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 RANBP6O60518 1105 aaKnown RBP14.49□□□□□ -0.09
SDHA-216ENST00000514027 WDHD1O75717 1129 aaPredicted RBP14.49□□□□□ -0.09
SDHA-216ENST00000514027 PSEN1P49768 467 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 FAM193AP78312 1265 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 MFSD6Q6ZSS7 791 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 KIF18AQ8NI77 898 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 LRP2BPQ9P2M1 347 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 ROBO1Q9Y6N7 1651 aa14.49□□□□□ -0.09
SDHA-216ENST00000514027 DOCK2Q92608 1830 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 PHLPP1O60346 1717 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 LOC102724428A0A0B4J2F2 783 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 CAMTA2O94983 1202 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 SIK1P57059 783 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 AXDND1Q5T1B0 1012 aaPredicted RBP14.48□□□□□ -0.09
SDHA-216ENST00000514027 AKNAD1Q5T1N1 836 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 ISM2Q6H9L7 571 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 CREBRFQ8IUR6 639 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 NACAP1Q9BZK3 213 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 TACC3Q9Y6A5 838 aa14.48□□□□□ -0.09
SDHA-216ENST00000514027 GSG1L2A8MUP6 293 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 SSRP1Q08945 709 aaKnown RBP14.47□□□□□ -0.09
SDHA-216ENST00000514027 SLC39A14Q15043 492 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 ALX1Q15699 326 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 CCDC82Q8N4S0 544 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 CNNM2Q9H8M5 875 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 CMA1P23946 247 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 SYKP43405 635 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 CHRNDQ07001 517 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 ITPK1Q13572 414 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 TPD52L1Q16890 204 aaPredicted RBP14.47□□□□□ -0.09
SDHA-216ENST00000514027 PARP10Q53GL7 1025 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 SGMS1Q86VZ5 419 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 LRRC8AQ8IWT6 810 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 KRT23Q9C075 422 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 ABCF2Q9UG63 623 aa14.47□□□□□ -0.09
SDHA-216ENST00000514027 SMC2O95347 1197 aa14.46□□□□□ -0.09
SDHA-216ENST00000514027 NTSR2O95665 410 aa14.46□□□□□ -0.09
SDHA-216ENST00000514027 NTRK3Q16288 839 aa14.46□□□□□ -0.09
SDHA-216ENST00000514027 FAM217BQ9NTX9 383 aaPredicted RBP14.46□□□□□ -0.09
SDHA-216ENST00000514027 LIFRP42702 1097 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms