RNA–Protein interactions for RNA: ENST00000512153.5

COPB2-208, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-208ENST00000512153 IFIT1P09914 478 aaKnown RBP13.39□□□□□ -0.27
COPB2-208ENST00000512153 PTPRAP18433 802 aa13.39□□□□□ -0.27
COPB2-208ENST00000512153 MDM2Q00987 491 aaPredicted RBP13.39□□□□□ -0.27
COPB2-208ENST00000512153 NFIAQ12857 509 aa13.39□□□□□ -0.27
COPB2-208ENST00000512153 SLC4A10Q6U841 1118 aa13.39□□□□□ -0.27
COPB2-208ENST00000512153 WDR66Q8TBY9 1149 aa13.39□□□□□ -0.27
COPB2-208ENST00000512153 PNMA3Q9UL41 463 aa13.39□□□□□ -0.27
COPB2-208ENST00000512153 AFG3L2Q9Y4W6 797 aa13.39□□□□□ -0.27
COPB2-208ENST00000512153 LBHD1Q9BQE6 289 aaPredicted RBP13.38□□□□□ -0.27
COPB2-208ENST00000512153 PRDM6Q9NQX0 595 aa13.38□□□□□ -0.27
COPB2-208ENST00000512153 PDE8BO95263 885 aa13.37□□□□□ -0.27
COPB2-208ENST00000512153 DIXDC1Q155Q3 683 aa13.37□□□□□ -0.27
COPB2-208ENST00000512153 FAM110CQ1W6H9 321 aa13.37□□□□□ -0.27
COPB2-208ENST00000512153 LRRC24Q50LG9 513 aa13.37□□□□□ -0.27
COPB2-208ENST00000512153 ZNF697Q5TEC3 545 aa13.37□□□□□ -0.27
COPB2-208ENST00000512153 FAM109BQ6ICB4 259 aaPredicted RBP13.37□□□□□ -0.27
COPB2-208ENST00000512153 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
COPB2-208ENST00000512153 DAGLAQ9Y4D2 1042 aa13.37□□□□□ -0.27
COPB2-208ENST00000512153 UNC80Q8N2C7 3258 aa13.37□□□□□ -0.27
COPB2-208ENST00000512153 MGAMO43451 1857 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 PHF20L1A8MW92 1017 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 POTEB2H3BUK9 544 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 LDHBP07195 334 aaKnown RBP13.36□□□□□ -0.27
COPB2-208ENST00000512153 GCLCP48506 637 aaPredicted RBP13.36□□□□□ -0.27
COPB2-208ENST00000512153 TRIM32Q13049 653 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 ZFPM1Q8IX07 1006 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 SUCLG2Q96I99 432 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 GUCD1Q96NT3 240 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 SRCIN1Q9C0H9 1055 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
COPB2-208ENST00000512153 FAM198AQ9UFP1 575 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 OGDHLQ9ULD0 1010 aa13.36□□□□□ -0.27
COPB2-208ENST00000512153 CTNND1O60716 968 aaKnown RBP13.35□□□□□ -0.27
COPB2-208ENST00000512153 ALDH1L1O75891 902 aa13.35□□□□□ -0.27
COPB2-208ENST00000512153 CYP2B6P20813 491 aa13.35□□□□□ -0.27
COPB2-208ENST00000512153 RGS3P49796 1198 aa13.35□□□□□ -0.27
COPB2-208ENST00000512153 PABPC4Q13310 644 aaKnown RBP eCLIP13.35□□□□□ -0.27
COPB2-208ENST00000512153 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
COPB2-208ENST00000512153 PRKAG2Q9UGJ0 569 aa13.35□□□□□ -0.27
COPB2-208ENST00000512153 VAMP4O75379 141 aa13.34□□□□□ -0.27
COPB2-208ENST00000512153 SLC5A1P13866 664 aa13.34□□□□□ -0.27
COPB2-208ENST00000512153 PUM3Q15397 648 aaKnown RBP13.34□□□□□ -0.27
COPB2-208ENST00000512153 TREML2Q5T2D2 321 aa13.34□□□□□ -0.27
COPB2-208ENST00000512153 CCDC84Q86UT8 332 aaPredicted RBP13.34□□□□□ -0.27
COPB2-208ENST00000512153 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
COPB2-208ENST00000512153 MAFAQ8NHW3 353 aaPredicted RBP13.34□□□□□ -0.27
COPB2-208ENST00000512153 SYMPKQ92797 1274 aaKnown RBP13.34□□□□□ -0.27
COPB2-208ENST00000512153 A0A1B0GUL6 1792 aa13.34□□□□□ -0.27
COPB2-208ENST00000512153 ENTPD3O75355 529 aa13.33□□□□□ -0.28
COPB2-208ENST00000512153 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
COPB2-208ENST00000512153 PRDX5P30044 214 aa13.33□□□□□ -0.28
COPB2-208ENST00000512153 BICC1Q9H694 974 aaKnown RBP13.33□□□□□ -0.28
COPB2-208ENST00000512153 GNL3LQ9NVN8 582 aaKnown RBP13.33□□□□□ -0.28
COPB2-208ENST00000512153 GJD2Q9UKL4 321 aa13.33□□□□□ -0.28
COPB2-208ENST00000512153 PFASO15067 1338 aa13.33□□□□□ -0.28
COPB2-208ENST00000512153 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
COPB2-208ENST00000512153 DOCK3Q8IZD9 2030 aa13.32□□□□□ -0.28
COPB2-208ENST00000512153 NBPF7P0C2Y1 421 aaPredicted RBP13.32□□□□□ -0.28
COPB2-208ENST00000512153 SPP2Q13103 211 aa13.32□□□□□ -0.28
COPB2-208ENST00000512153 PICALMQ13492 652 aa13.32□□□□□ -0.28
COPB2-208ENST00000512153 PDE3AQ14432 1141 aa13.32□□□□□ -0.28
COPB2-208ENST00000512153 LRRC26Q2I0M4 334 aa13.32□□□□□ -0.28
COPB2-208ENST00000512153 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
COPB2-208ENST00000512153 PROCA1Q8NCQ7 364 aaPredicted RBP13.32□□□□□ -0.28
COPB2-208ENST00000512153 TRIB2Q92519 343 aa13.32□□□□□ -0.28
COPB2-208ENST00000512153 CDX2Q99626 313 aaPredicted RBP13.32□□□□□ -0.28
COPB2-208ENST00000512153 NUDT12Q9BQG2 462 aa13.32□□□□□ -0.28
COPB2-208ENST00000512153 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.32□□□□□ -0.28
COPB2-208ENST00000512153 IL16Q14005 1332 aa13.32□□□□□ -0.28
COPB2-208ENST00000512153 EXOSC9Q06265 439 aaKnown RBP13.31□□□□□ -0.28
COPB2-208ENST00000512153 VGLL2Q8N8G2 317 aa13.31□□□□□ -0.28
COPB2-208ENST00000512153 KLHDC4Q8TBB5 520 aa13.31□□□□□ -0.28
COPB2-208ENST00000512153 LPIN2Q92539 896 aa13.31□□□□□ -0.28
COPB2-208ENST00000512153 KAZALD1Q96I82 304 aa13.31□□□□□ -0.28
COPB2-208ENST00000512153 SENP6Q9GZR1 1112 aaPredicted RBP13.31□□□□□ -0.28
COPB2-208ENST00000512153 ASCC2Q9H1I8 757 aaPredicted RBP13.31□□□□□ -0.28
COPB2-208ENST00000512153 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
COPB2-208ENST00000512153 KIF16BQ96L93 1317 aa13.31□□□□□ -0.28
COPB2-208ENST00000512153 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
COPB2-208ENST00000512153 DDTLA6NHG4 134 aaPredicted RBP13.3□□□□□ -0.28
COPB2-208ENST00000512153 ZKSCAN1P17029 563 aaPredicted RBP13.3□□□□□ -0.28
COPB2-208ENST00000512153 COL9A1P20849 921 aa13.3□□□□□ -0.28
COPB2-208ENST00000512153 HMGCS2P54868 508 aa13.3□□□□□ -0.28
COPB2-208ENST00000512153 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
COPB2-208ENST00000512153 SLF2Q8IX21 1173 aa13.3□□□□□ -0.28
COPB2-208ENST00000512153 TRMT44Q8IYL2 757 aaKnown RBP13.3□□□□□ -0.28
COPB2-208ENST00000512153 ZNF280CQ8ND82 737 aa13.3□□□□□ -0.28
COPB2-208ENST00000512153 IDI2Q9BXS1 227 aa13.3□□□□□ -0.28
COPB2-208ENST00000512153 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
COPB2-208ENST00000512153 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.28
COPB2-208ENST00000512153 SALL2Q9Y467 1007 aaPredicted RBP13.3□□□□□ -0.28
COPB2-208ENST00000512153 SLURP2P0DP57 97 aa13.29□□□□□ -0.28
COPB2-208ENST00000512153 COL6A1P12109 1028 aa13.29□□□□□ -0.28
COPB2-208ENST00000512153 FGFR2P21802 821 aa13.29□□□□□ -0.28
COPB2-208ENST00000512153 CACNB2Q08289 660 aaPredicted RBP13.29□□□□□ -0.28
COPB2-208ENST00000512153 SH3BP5LQ7L8J4 393 aa13.29□□□□□ -0.28
COPB2-208ENST00000512153 DZIP1Q86YF9 867 aaKnown RBP13.29□□□□□ -0.28
COPB2-208ENST00000512153 SOCS4Q8WXH5 440 aa13.29□□□□□ -0.28
COPB2-208ENST00000512153 PRKRIP1Q9H875 184 aaPredicted RBP13.29□□□□□ -0.28
COPB2-208ENST00000512153 XRCC5P13010 732 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms