RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 NAV1Q8NEY1 1877 aa23.44■■□□□ 1.34
LMNA-221ENST00000506981 PPP4CP60510 307 aa23.43■■□□□ 1.34
LMNA-221ENST00000506981 SLC9C2Q5TAH2 1124 aa23.43■■□□□ 1.34
LMNA-221ENST00000506981 ADGRA1Q86SQ6 560 aa23.43■■□□□ 1.34
LMNA-221ENST00000506981 SH3RF3Q8TEJ3 882 aaPredicted RBP23.43■■□□□ 1.34
LMNA-221ENST00000506981 SLC10A4Q96EP9 437 aa23.43■■□□□ 1.34
LMNA-221ENST00000506981 NPM3O75607 178 aaKnown RBP23.42■■□□□ 1.34
LMNA-221ENST00000506981 EDC3Q96F86 508 aaKnown RBP23.42■■□□□ 1.34
LMNA-221ENST00000506981 CSRNP1Q96S65 589 aa23.42■■□□□ 1.34
LMNA-221ENST00000506981 ZNF341Q9BYN7 854 aa23.42■■□□□ 1.34
LMNA-221ENST00000506981 DDX4Q9NQI0 724 aaKnown RBP23.42■■□□□ 1.34
LMNA-221ENST00000506981 CSADQ9Y600 493 aa23.42■■□□□ 1.34
LMNA-221ENST00000506981 COL2A1P02458 1487 aaPredicted RBP23.42■■□□□ 1.34
LMNA-221ENST00000506981 PDE6AP16499 860 aa23.41■■□□□ 1.34
LMNA-221ENST00000506981 MX1P20591 662 aa23.41■■□□□ 1.34
LMNA-221ENST00000506981 MIGA1Q8NAN2 632 aa23.41■■□□□ 1.34
LMNA-221ENST00000506981 DOCK1Q14185 1865 aa23.41■■□□□ 1.34
LMNA-221ENST00000506981 ATAD5Q96QE3 1844 aa23.4■■□□□ 1.34
LMNA-221ENST00000506981 MAP3K9P80192 1104 aa23.4■■□□□ 1.34
LMNA-221ENST00000506981 KIF23Q02241 960 aaPredicted RBP23.4■■□□□ 1.34
LMNA-221ENST00000506981 TSHZ3Q63HK5 1081 aa23.4■■□□□ 1.34
LMNA-221ENST00000506981 ZSCAN25Q6NSZ9 544 aa23.4■■□□□ 1.34
LMNA-221ENST00000506981 MIGA2Q7L4E1 593 aa23.4■■□□□ 1.34
LMNA-221ENST00000506981 ZFPM1Q8IX07 1006 aa23.4■■□□□ 1.34
LMNA-221ENST00000506981 SMC5Q8IY18 1101 aa23.4■■□□□ 1.34
LMNA-221ENST00000506981 REM2Q8IYK8 340 aaPredicted RBP23.4■■□□□ 1.34
LMNA-221ENST00000506981 CLMNQ96JQ2 1002 aa23.4■■□□□ 1.34
LMNA-221ENST00000506981 WRNIP1Q96S55 665 aa23.4■■□□□ 1.34
LMNA-221ENST00000506981 ZNF532Q9HCE3 1301 aa23.39■■□□□ 1.34
LMNA-221ENST00000506981 GLRX3O76003 335 aaKnown RBP23.39■■□□□ 1.33
LMNA-221ENST00000506981 DYNLL1P63167 89 aaKnown RBP23.39■■□□□ 1.33
LMNA-221ENST00000506981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.39■■□□□ 1.33
LMNA-221ENST00000506981 TGFBRAP1Q8WUH2 860 aa23.39■■□□□ 1.33
LMNA-221ENST00000506981 OSBPL5Q9H0X9 879 aaPredicted RBP23.39■■□□□ 1.33
LMNA-221ENST00000506981 WBP1LQ9NX94 342 aa23.39■■□□□ 1.33
LMNA-221ENST00000506981 ATRNL1Q5VV63 1379 aa23.39■■□□□ 1.33
LMNA-221ENST00000506981 MAGEB6P1A0A0J9YX57 407 aa23.38■■□□□ 1.33
LMNA-221ENST00000506981 IGHDP01880 384 aa23.38■■□□□ 1.33
LMNA-221ENST00000506981 MKRN3Q13064 507 aaKnown RBP23.38■■□□□ 1.33
LMNA-221ENST00000506981 B4GALNT3Q6L9W6 998 aa23.38■■□□□ 1.33
LMNA-221ENST00000506981 ELP3Q9H9T3 547 aa23.38■■□□□ 1.33
LMNA-221ENST00000506981 SIPA1L1O43166 1804 aa23.38■■□□□ 1.33
LMNA-221ENST00000506981 DDTLA6NHG4 134 aaPredicted RBP23.37■■□□□ 1.33
LMNA-221ENST00000506981 USP5P45974 858 aa23.37■■□□□ 1.33
LMNA-221ENST00000506981 VGLL4Q14135 290 aa23.37■■□□□ 1.33
LMNA-221ENST00000506981 SPRYD7Q5W111 196 aa23.37■■□□□ 1.33
LMNA-221ENST00000506981 MAPKAPK5Q8IW41 473 aa23.37■■□□□ 1.33
LMNA-221ENST00000506981 OTUD7AQ8TE49 926 aaPredicted RBP23.37■■□□□ 1.33
LMNA-221ENST00000506981 WNK4Q96J92 1243 aa23.37■■□□□ 1.33
LMNA-221ENST00000506981 ZIC5Q96T25 663 aa23.37■■□□□ 1.33
LMNA-221ENST00000506981 LNPKQ9C0E8 428 aa23.37■■□□□ 1.33
LMNA-221ENST00000506981 MYH8P13535 1937 aa23.37■■□□□ 1.33
LMNA-221ENST00000506981 FLT1P17948 1338 aa23.36■■□□□ 1.33
LMNA-221ENST00000506981 BAZ2AQ9UIF9 1905 aaKnown RBP23.36■■□□□ 1.33
LMNA-221ENST00000506981 ZBTB48P10074 688 aaPredicted RBP23.36■■□□□ 1.33
LMNA-221ENST00000506981 ADD2P35612 726 aa23.36■■□□□ 1.33
LMNA-221ENST00000506981 LRRFIP1Q32MZ4 808 aaKnown RBP23.36■■□□□ 1.33
LMNA-221ENST00000506981 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.36■■□□□ 1.33
LMNA-221ENST00000506981 SH3BP5LQ7L8J4 393 aa23.36■■□□□ 1.33
LMNA-221ENST00000506981 DHX36Q9H2U1 1008 aaKnown RBP23.36■■□□□ 1.33
LMNA-221ENST00000506981 CA12O43570 354 aa23.35■■□□□ 1.33
LMNA-221ENST00000506981 SREBF2Q12772 1141 aa23.35■■□□□ 1.33
LMNA-221ENST00000506981 CRNKL1Q9BZJ0 848 aaKnown RBP23.35■■□□□ 1.33
LMNA-221ENST00000506981 DDX60LQ5H9U9 1706 aaKnown RBP23.34■■□□□ 1.33
LMNA-221ENST00000506981 TCRBV5S4A2TA0A5A2 114 aa23.34■■□□□ 1.33
LMNA-221ENST00000506981 CHD1LQ86WJ1 897 aa23.34■■□□□ 1.33
LMNA-221ENST00000506981 KBTBD3Q8NAB2 608 aa23.34■■□□□ 1.33
LMNA-221ENST00000506981 PI4K2BQ8TCG2 481 aa23.34■■□□□ 1.33
LMNA-221ENST00000506981 OPTNQ96CV9 577 aa23.34■■□□□ 1.33
LMNA-221ENST00000506981 SALL3Q9BXA9 1300 aa23.33■■□□□ 1.33
LMNA-221ENST00000506981 MANSC4A6NHS7 340 aaPredicted RBP23.33■■□□□ 1.33
LMNA-221ENST00000506981 FOXN1O15353 648 aa23.33■■□□□ 1.33
LMNA-221ENST00000506981 HLA-DOAP06340 250 aa23.33■■□□□ 1.33
LMNA-221ENST00000506981 CTCFP49711 727 aaPredicted RBP23.33■■□□□ 1.33
LMNA-221ENST00000506981 UBE3CQ15386 1083 aa23.33■■□□□ 1.33
LMNA-221ENST00000506981 ZKSCAN4Q969J2 545 aaPredicted RBP23.33■■□□□ 1.33
LMNA-221ENST00000506981 RIOK1Q9BRS2 568 aaKnown RBP23.33■■□□□ 1.33
LMNA-221ENST00000506981 TRIM34Q9BYJ4 488 aa23.33■■□□□ 1.33
LMNA-221ENST00000506981 INPP5BP32019 993 aa23.32■■□□□ 1.32
LMNA-221ENST00000506981 NUCB1Q02818 461 aa23.32■■□□□ 1.32
LMNA-221ENST00000506981 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.32■■□□□ 1.321e-6■■■■■ 53.3
LMNA-221ENST00000506981 PI4KBQ9UBF8 816 aa23.32■■□□□ 1.32
LMNA-221ENST00000506981 ZNF112Q9UJU3 913 aa23.32■■□□□ 1.32
LMNA-221ENST00000506981 SNCAIPQ9Y6H5 919 aa23.32■■□□□ 1.32
LMNA-221ENST00000506981 TBC1D12O60347 775 aa23.31■■□□□ 1.32
LMNA-221ENST00000506981 ZFYP08048 801 aaPredicted RBP23.31■■□□□ 1.32
LMNA-221ENST00000506981 PDE1AP54750 535 aa23.31■■□□□ 1.32
LMNA-221ENST00000506981 ERO1BQ86YB8 467 aa23.31■■□□□ 1.32
LMNA-221ENST00000506981 OTUD5Q96G74 571 aa23.31■■□□□ 1.32
LMNA-221ENST00000506981 FSD1Q9BTV5 496 aa23.31■■□□□ 1.32
LMNA-221ENST00000506981 STAP2Q9UGK3 403 aa23.31■■□□□ 1.32
LMNA-221ENST00000506981 SAP30BPQ9UHR5 308 aaKnown RBP23.31■■□□□ 1.32
LMNA-221ENST00000506981 HERC5Q9UII4 1024 aaKnown RBP23.31■■□□□ 1.32
LMNA-221ENST00000506981 PCNTO95613 3336 aa23.3■■□□□ 1.32
LMNA-221ENST00000506981 SPDYE5A6NIY4 337 aa23.3■■□□□ 1.32
LMNA-221ENST00000506981 MBD4O95243 580 aa23.3■■□□□ 1.32
LMNA-221ENST00000506981 NOL9Q5SY16 702 aaKnown RBP23.3■■□□□ 1.32
LMNA-221ENST00000506981 LCORLQ8N3X6 602 aa23.3■■□□□ 1.32
LMNA-221ENST00000506981 CRACR2BQ8N4Y2 399 aaPredicted RBP23.3■■□□□ 1.32
LMNA-221ENST00000506981 PHIPQ8WWQ0 1821 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms