RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.49■□□□□ 0.231e-6■■■■□ 23.4
PDCD6-204ENST00000506909 GCC1Q96CN9 775 aa16.49■□□□□ 0.23
PDCD6-204ENST00000506909 ABHD8Q96I13 439 aa16.49■□□□□ 0.23
PDCD6-204ENST00000506909 CLMNQ96JQ2 1002 aa16.49■□□□□ 0.23
PDCD6-204ENST00000506909 HAUS7Q99871 368 aa16.49■□□□□ 0.23
PDCD6-204ENST00000506909 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
PDCD6-204ENST00000506909 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
PDCD6-204ENST00000506909 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
PDCD6-204ENST00000506909 AATFQ9NY61 560 aaKnown RBP eCLIP16.49■□□□□ 0.238e-6■■■■□ 21.3
PDCD6-204ENST00000506909 COL2A1P02458 1487 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-204ENST00000506909 GOLIM4O00461 696 aa16.48■□□□□ 0.23
PDCD6-204ENST00000506909 CA12O43570 354 aa16.48■□□□□ 0.23
PDCD6-204ENST00000506909 ZBTB48P10074 688 aaPredicted RBP16.48■□□□□ 0.23
PDCD6-204ENST00000506909 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
PDCD6-204ENST00000506909 MAGEB6Q8N7X4 407 aa16.48■□□□□ 0.23
PDCD6-204ENST00000506909 CSRNP1Q96S65 589 aa16.48■□□□□ 0.23
PDCD6-204ENST00000506909 DNAJC2Q99543 621 aaKnown RBP16.48■□□□□ 0.23
PDCD6-204ENST00000506909 ZNF341Q9BYN7 854 aa16.48■□□□□ 0.23
PDCD6-204ENST00000506909 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
PDCD6-204ENST00000506909 ATRNL1Q5VV63 1379 aa16.48■□□□□ 0.23
PDCD6-204ENST00000506909 CTCFP49711 727 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-204ENST00000506909 MAP3K10Q02779 954 aa16.47■□□□□ 0.23
PDCD6-204ENST00000506909 PICALMQ13492 652 aa16.47■□□□□ 0.23
PDCD6-204ENST00000506909 MIGA2Q7L4E1 593 aa16.47■□□□□ 0.23
PDCD6-204ENST00000506909 SH3BP5LQ7L8J4 393 aa16.47■□□□□ 0.23
PDCD6-204ENST00000506909 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
PDCD6-204ENST00000506909 SH3RF3Q8TEJ3 882 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-204ENST00000506909 GPATCH3Q96I76 525 aa16.47■□□□□ 0.23
PDCD6-204ENST00000506909 WNK4Q96J92 1243 aa16.47■□□□□ 0.23
PDCD6-204ENST00000506909 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-204ENST00000506909 ZNF112Q9UJU3 913 aa16.47■□□□□ 0.23
PDCD6-204ENST00000506909 DDTLA6NHG4 134 aaPredicted RBP16.46■□□□□ 0.23
PDCD6-204ENST00000506909 TM4SF4P48230 202 aa16.46■□□□□ 0.23
PDCD6-204ENST00000506909 SLC9C2Q5TAH2 1124 aa16.46■□□□□ 0.23
PDCD6-204ENST00000506909 ZSCAN29Q8IWY8 852 aaPredicted RBP16.46■□□□□ 0.23
PDCD6-204ENST00000506909 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
PDCD6-204ENST00000506909 CSADQ9Y600 493 aa16.46■□□□□ 0.23
PDCD6-204ENST00000506909 CASP8AP2Q9UKL3 1982 aa16.46■□□□□ 0.22
PDCD6-204ENST00000506909 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
PDCD6-204ENST00000506909 SIPA1L1O43166 1804 aa16.45■□□□□ 0.22
PDCD6-204ENST00000506909 ATAD5Q96QE3 1844 aa16.45■□□□□ 0.22
PDCD6-204ENST00000506909 PDE6AP16499 860 aa16.45■□□□□ 0.22
PDCD6-204ENST00000506909 INHBEP58166 350 aa16.45■□□□□ 0.22
PDCD6-204ENST00000506909 VGLL4Q14135 290 aa16.45■□□□□ 0.22
PDCD6-204ENST00000506909 EDC3Q96F86 508 aaKnown RBP16.45■□□□□ 0.22
PDCD6-204ENST00000506909 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
PDCD6-204ENST00000506909 ELP3Q9H9T3 547 aa16.45■□□□□ 0.22
PDCD6-204ENST00000506909 ZBTB47Q9UFB7 747 aaPredicted RBP16.45■□□□□ 0.22
PDCD6-204ENST00000506909 DOCK1Q14185 1865 aa16.45■□□□□ 0.22
PDCD6-204ENST00000506909 MANSC4A6NHS7 340 aaPredicted RBP16.44■□□□□ 0.22
PDCD6-204ENST00000506909 TBC1D12O60347 775 aa16.44■□□□□ 0.22
PDCD6-204ENST00000506909 HSPA8P11142 646 aaKnown RBP16.44■□□□□ 0.22
PDCD6-204ENST00000506909 RGS19P49795 217 aa16.44■□□□□ 0.22
PDCD6-204ENST00000506909 DYNLL1P63167 89 aaKnown RBP16.44■□□□□ 0.22
PDCD6-204ENST00000506909 SREBF2Q12772 1141 aa16.44■□□□□ 0.22
PDCD6-204ENST00000506909 MKRN3Q13064 507 aaKnown RBP16.44■□□□□ 0.22
PDCD6-204ENST00000506909 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
PDCD6-204ENST00000506909 SMC5Q8IY18 1101 aa16.44■□□□□ 0.22
PDCD6-204ENST00000506909 MIGA1Q8NAN2 632 aa16.44■□□□□ 0.22
PDCD6-204ENST00000506909 ZKSCAN4Q969J2 545 aaPredicted RBP16.44■□□□□ 0.22
PDCD6-204ENST00000506909 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.22
PDCD6-204ENST00000506909 DHX36Q9H2U1 1008 aaKnown RBP16.44■□□□□ 0.22
PDCD6-204ENST00000506909 SAGE1Q9NXZ1 904 aa16.44■□□□□ 0.22
PDCD6-204ENST00000506909 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 SPDYE5A6NIY4 337 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 GJA5P36382 358 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 TGFBRAP1Q8WUH2 860 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 OPTNQ96CV9 577 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 RIOK1Q9BRS2 568 aaKnown RBP16.43■□□□□ 0.22
PDCD6-204ENST00000506909 RNF186Q9NXI6 227 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
PDCD6-204ENST00000506909 SNCAIPQ9Y6H5 919 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 ZNF532Q9HCE3 1301 aa16.43■□□□□ 0.22
PDCD6-204ENST00000506909 PHIPQ8WWQ0 1821 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 NAV1Q8NEY1 1877 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 ERC2O15083 957 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 IGHDP01880 384 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 INPP5BP32019 993 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 ADD2P35612 726 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 LBX1P52954 281 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
PDCD6-204ENST00000506909 PTPRFP10586 1907 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 BAZ2AQ9UIF9 1905 aaKnown RBP16.42■□□□□ 0.22
PDCD6-204ENST00000506909 FLT1P17948 1338 aa16.42■□□□□ 0.22
PDCD6-204ENST00000506909 MAGEB6P1A0A0J9YX57 407 aa16.41■□□□□ 0.22
PDCD6-204ENST00000506909 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
PDCD6-204ENST00000506909 GLRX3O76003 335 aaKnown RBP16.41■□□□□ 0.22
PDCD6-204ENST00000506909 MX1P20591 662 aa16.41■□□□□ 0.22
PDCD6-204ENST00000506909 UBE3CQ15386 1083 aa16.41■□□□□ 0.22
PDCD6-204ENST00000506909 ZSCAN25Q6NSZ9 544 aa16.41■□□□□ 0.22
PDCD6-204ENST00000506909 MAPKAPK5Q8IW41 473 aa16.41■□□□□ 0.22
PDCD6-204ENST00000506909 PI4K2BQ8TCG2 481 aa16.41■□□□□ 0.22
PDCD6-204ENST00000506909 OTUD7AQ8TE49 926 aaPredicted RBP16.41■□□□□ 0.22
PDCD6-204ENST00000506909 PI4KBQ9UBF8 816 aa16.41■□□□□ 0.22
PDCD6-204ENST00000506909 HERC5Q9UII4 1024 aaKnown RBP16.41■□□□□ 0.22
PDCD6-204ENST00000506909 DDX60LQ5H9U9 1706 aaKnown RBP16.41■□□□□ 0.22
PDCD6-204ENST00000506909 CCDC85CA6NKD9 419 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms