RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 MTFR1Q15390 333 aa17.56■□□□□ 0.4
POLR2J3-207ENST00000503564 DDX4Q9NQI0 724 aaKnown RBP17.56■□□□□ 0.4
POLR2J3-207ENST00000503564 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
POLR2J3-207ENST00000503564 MYPNQ86TC9 1320 aa17.55■□□□□ 0.4
POLR2J3-207ENST00000503564 A0A0G2JLL6 359 aaPredicted RBP17.55■□□□□ 0.4
POLR2J3-207ENST00000503564 SLURP2P0DP57 97 aa17.55■□□□□ 0.4
POLR2J3-207ENST00000503564 CYP2C8P10632 490 aa17.55■□□□□ 0.4
POLR2J3-207ENST00000503564 PRRT2Q7Z6L0 340 aaPredicted RBP17.55■□□□□ 0.4
POLR2J3-207ENST00000503564 DZIP1Q86YF9 867 aaKnown RBP17.55■□□□□ 0.4
POLR2J3-207ENST00000503564 FAM163AQ96GL9 167 aaPredicted RBP17.55■□□□□ 0.4
POLR2J3-207ENST00000503564 ATAD5Q96QE3 1844 aa17.55■□□□□ 0.4
POLR2J3-207ENST00000503564 MROH7-TTC4A0A0A0MT08 1334 aa17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 LOC285556D6RIA3 1793 aa17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 A0A1B0GUL7 405 aa17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 PTPRAP18433 802 aa17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 RARSP54136 660 aaKnown RBP17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 TIMM10P62072 90 aa17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 MTX1Q13505 466 aa17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 ZNF384Q8TF68 577 aa17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 ZHX2Q9Y6X8 837 aa17.54■□□□□ 0.4
POLR2J3-207ENST00000503564 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 HOXD10P28358 340 aa17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 GRK4P32298 578 aa17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 BTDP43251 543 aa17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 FXR1P51114 621 aaKnown RBP eCLIP17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 PRKCZQ05513 592 aa17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 RAET1EQ8TD07 263 aa17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 ABCF2Q9UG63 623 aa17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 AFG3L2Q9Y4W6 797 aa17.53■□□□□ 0.4
POLR2J3-207ENST00000503564 DOCK3Q8IZD9 2030 aa17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 SRGAP3O43295 1099 aa17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 RHBDL3P58872 404 aa17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 TFCP2Q12800 502 aa17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 FASTKD5Q7L8L6 764 aaKnown RBP17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 SLF2Q8IX21 1173 aa17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 PICK1Q9NRD5 415 aa17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 MAST2Q6P0Q8 1798 aa17.52■□□□□ 0.4
POLR2J3-207ENST00000503564 SIPA1L1O43166 1804 aa17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 COL2A1P02458 1487 aaPredicted RBP17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 TRIOBPQ9H2D6 2365 aa17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 GPR75-ASB3A0A0A6YYF3 556 aa17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 GNAI3P08754 354 aa17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 FCGRTP55899 365 aa17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 MECOMQ03112 1051 aa17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 PICALMQ13492 652 aa17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 MVPQ14764 893 aaKnown RBP17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 SPTY2D1Q68D10 685 aaPredicted RBP17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 UBE2Q1Q7Z7E8 422 aa17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 ZSCAN29Q8IWY8 852 aaPredicted RBP17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 COLQQ9Y215 455 aaPredicted RBP17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 AKAP2Q9Y2D5 859 aa17.51■□□□□ 0.39
POLR2J3-207ENST00000503564 CDK5RAP2Q96SN8 1893 aa17.5■□□□□ 0.39
POLR2J3-207ENST00000503564 H0YGN5 161 aa17.5■□□□□ 0.39
POLR2J3-207ENST00000503564 CTNND1O60716 968 aaKnown RBP17.5■□□□□ 0.39
POLR2J3-207ENST00000503564 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
POLR2J3-207ENST00000503564 GJA8P48165 433 aa17.5■□□□□ 0.39
POLR2J3-207ENST00000503564 HMG20BQ9P0W2 317 aa17.5■□□□□ 0.39
POLR2J3-207ENST00000503564 GABRQQ9UN88 632 aa17.5■□□□□ 0.39
POLR2J3-207ENST00000503564 GJB1P08034 283 aa17.49■□□□□ 0.39
POLR2J3-207ENST00000503564 CCL5P13501 91 aa17.49■□□□□ 0.39
POLR2J3-207ENST00000503564 PI16Q6UXB8 463 aa17.49■□□□□ 0.39
POLR2J3-207ENST00000503564 GADL1Q6ZQY3 521 aa17.49■□□□□ 0.39
POLR2J3-207ENST00000503564 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
POLR2J3-207ENST00000503564 CCDC84Q86UT8 332 aaPredicted RBP17.49■□□□□ 0.39
POLR2J3-207ENST00000503564 SLAIN1Q8ND83 568 aa17.49■□□□□ 0.39
POLR2J3-207ENST00000503564 NKX2-3Q8TAU0 364 aa17.49■□□□□ 0.39
POLR2J3-207ENST00000503564 FOCADQ5VW36 1801 aa17.49■□□□□ 0.39
POLR2J3-207ENST00000503564 TBC1D12O60347 775 aa17.48■□□□□ 0.39
POLR2J3-207ENST00000503564 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
POLR2J3-207ENST00000503564 NSUN4Q96CB9 384 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-207ENST00000503564 TNNQ9UQP3 1299 aa17.48■□□□□ 0.39
POLR2J3-207ENST00000503564 TRIM75PA6NK02 468 aa17.47■□□□□ 0.39
POLR2J3-207ENST00000503564 FAM196BA6NMK8 535 aa17.47■□□□□ 0.39
POLR2J3-207ENST00000503564 TRIM27P14373 513 aa17.47■□□□□ 0.39
POLR2J3-207ENST00000503564 UBXN2AP68543 259 aa17.47■□□□□ 0.39
POLR2J3-207ENST00000503564 SPATA5Q8NB90 893 aa17.47■□□□□ 0.39
POLR2J3-207ENST00000503564 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
POLR2J3-207ENST00000503564 AGTPBP1Q9UPW5 1226 aa17.47■□□□□ 0.39
POLR2J3-207ENST00000503564 MYO5AQ9Y4I1 1855 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-207ENST00000503564 MAP4K4O95819 1239 aaPredicted RBP17.46■□□□□ 0.39
POLR2J3-207ENST00000503564 FLT3LGP49771 235 aa17.46■□□□□ 0.39
POLR2J3-207ENST00000503564 TREML2Q5T2D2 321 aa17.46■□□□□ 0.39
POLR2J3-207ENST00000503564 TBC1D9Q6ZT07 1266 aa17.46■□□□□ 0.39
POLR2J3-207ENST00000503564 NEUROD6Q96NK8 337 aa17.46■□□□□ 0.39
POLR2J3-207ENST00000503564 OSBPL5Q9H0X9 879 aaPredicted RBP17.46■□□□□ 0.39
POLR2J3-207ENST00000503564 UNC93B1Q9H1C4 597 aa17.46■□□□□ 0.39
POLR2J3-207ENST00000503564 ALPK3Q96L96 1907 aa17.45■□□□□ 0.38
POLR2J3-207ENST00000503564 PNMA6EA0A0J9YXQ4 647 aa17.45■□□□□ 0.38
POLR2J3-207ENST00000503564 MCAMP43121 646 aa17.45■□□□□ 0.38
POLR2J3-207ENST00000503564 IRF5Q13568 498 aa17.45■□□□□ 0.38
POLR2J3-207ENST00000503564 SMCR8Q8TEV9 937 aaPredicted RBP17.45■□□□□ 0.38
POLR2J3-207ENST00000503564 U2AF1L4Q8WU68 220 aaKnown RBP17.45■□□□□ 0.38
POLR2J3-207ENST00000503564 BIN2Q9UBW5 565 aaPredicted RBP17.45■□□□□ 0.38
POLR2J3-207ENST00000503564 TNPO2O14787 897 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms