RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 CSRNP1Q96S65 589 aa26.65■■□□□ 1.86
UBE2D3-214ENST00000503282 BEGAINQ9BUH8 593 aa26.65■■□□□ 1.86
UBE2D3-214ENST00000503282 WBP1LQ9NX94 342 aa26.65■■□□□ 1.86
UBE2D3-214ENST00000503282 RFX7Q2KHR2 1363 aa26.65■■□□□ 1.86
UBE2D3-214ENST00000503282 DOCK2Q92608 1830 aa26.65■■□□□ 1.86
UBE2D3-214ENST00000503282 TTC41PQ6P2S7 1318 aa26.65■■□□□ 1.86
UBE2D3-214ENST00000503282 ERC2O15083 957 aa26.64■■□□□ 1.86
UBE2D3-214ENST00000503282 MAP3K9P80192 1104 aa26.64■■□□□ 1.86
UBE2D3-214ENST00000503282 SMC5Q8IY18 1101 aa26.64■■□□□ 1.86
UBE2D3-214ENST00000503282 MIGA1Q8NAN2 632 aa26.64■■□□□ 1.86
UBE2D3-214ENST00000503282 CLMNQ96JQ2 1002 aa26.64■■□□□ 1.86
UBE2D3-214ENST00000503282 ZIC5Q96T25 663 aa26.64■■□□□ 1.86
UBE2D3-214ENST00000503282 ZNF341Q9BYN7 854 aa26.64■■□□□ 1.86
UBE2D3-214ENST00000503282 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.64■■□□□ 1.869e-7■■□□□ 13.5
UBE2D3-214ENST00000503282 PDE6AP16499 860 aa26.63■■□□□ 1.85
UBE2D3-214ENST00000503282 DYNLL1P63167 89 aaKnown RBP26.63■■□□□ 1.85
UBE2D3-214ENST00000503282 TSHZ3Q63HK5 1081 aa26.63■■□□□ 1.85
UBE2D3-214ENST00000503282 B4GALNT3Q6L9W6 998 aa26.63■■□□□ 1.85
UBE2D3-214ENST00000503282 CSADQ9Y600 493 aa26.63■■□□□ 1.85
UBE2D3-214ENST00000503282 THSD7BQ9C0I4 1608 aa26.62■■□□□ 1.85
UBE2D3-214ENST00000503282 MX1P20591 662 aa26.62■■□□□ 1.85
UBE2D3-214ENST00000503282 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.62■■□□□ 1.85
UBE2D3-214ENST00000503282 OTUD7AQ8TE49 926 aaPredicted RBP26.62■■□□□ 1.85
UBE2D3-214ENST00000503282 TGFBRAP1Q8WUH2 860 aa26.62■■□□□ 1.85
UBE2D3-214ENST00000503282 ZNF532Q9HCE3 1301 aa26.62■■□□□ 1.85
UBE2D3-214ENST00000503282 DDTLA6NHG4 134 aaPredicted RBP26.61■■□□□ 1.85
UBE2D3-214ENST00000503282 MKRN3Q13064 507 aaKnown RBP26.61■■□□□ 1.85
UBE2D3-214ENST00000503282 SH3BP5LQ7L8J4 393 aa26.61■■□□□ 1.85
UBE2D3-214ENST00000503282 REM2Q8IYK8 340 aaPredicted RBP26.61■■□□□ 1.85
UBE2D3-214ENST00000503282 WRNIP1Q96S55 665 aa26.61■■□□□ 1.85
UBE2D3-214ENST00000503282 OSBPL5Q9H0X9 879 aaPredicted RBP26.61■■□□□ 1.85
UBE2D3-214ENST00000503282 MAGEB6P1A0A0J9YX57 407 aa26.6■■□□□ 1.85
UBE2D3-214ENST00000503282 GLRX3O76003 335 aaKnown RBP26.6■■□□□ 1.85
UBE2D3-214ENST00000503282 SPRYD7Q5W111 196 aa26.6■■□□□ 1.85
UBE2D3-214ENST00000503282 ZSCAN25Q6NSZ9 544 aa26.6■■□□□ 1.85
UBE2D3-214ENST00000503282 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.6■■□□□ 1.85
UBE2D3-214ENST00000503282 ELP3Q9H9T3 547 aa26.6■■□□□ 1.85
UBE2D3-214ENST00000503282 MAPKAPK5Q8IW41 473 aa26.59■■□□□ 1.85
UBE2D3-214ENST00000503282 LNPKQ9C0E8 428 aa26.59■■□□□ 1.85
UBE2D3-214ENST00000503282 TCRBV5S4A2TA0A5A2 114 aa26.58■■□□□ 1.85
UBE2D3-214ENST00000503282 ADD2P35612 726 aa26.58■■□□□ 1.85
UBE2D3-214ENST00000503282 USP5P45974 858 aa26.58■■□□□ 1.85
UBE2D3-214ENST00000503282 VGLL4Q14135 290 aa26.58■■□□□ 1.85
UBE2D3-214ENST00000503282 ZKSCAN4Q969J2 545 aaPredicted RBP26.58■■□□□ 1.85
UBE2D3-214ENST00000503282 WNK4Q96J92 1243 aa26.58■■□□□ 1.85
UBE2D3-214ENST00000503282 DHX36Q9H2U1 1008 aaKnown RBP26.58■■□□□ 1.85
UBE2D3-214ENST00000503282 ATRNL1Q5VV63 1379 aa26.58■■□□□ 1.84
UBE2D3-214ENST00000503282 ZBTB48P10074 688 aaPredicted RBP26.57■■□□□ 1.84
UBE2D3-214ENST00000503282 PI4K2BQ8TCG2 481 aa26.57■■□□□ 1.84
UBE2D3-214ENST00000503282 RIOK1Q9BRS2 568 aaKnown RBP26.57■■□□□ 1.84
UBE2D3-214ENST00000503282 FOXN1O15353 648 aa26.56■■□□□ 1.84
UBE2D3-214ENST00000503282 NUCB1Q02818 461 aa26.56■■□□□ 1.84
UBE2D3-214ENST00000503282 UBE3CQ15386 1083 aa26.56■■□□□ 1.84
UBE2D3-214ENST00000503282 CHD1LQ86WJ1 897 aa26.56■■□□□ 1.84
UBE2D3-214ENST00000503282 KBTBD3Q8NAB2 608 aa26.56■■□□□ 1.84
UBE2D3-214ENST00000503282 OPTNQ96CV9 577 aa26.56■■□□□ 1.84
UBE2D3-214ENST00000503282 ZNF112Q9UJU3 913 aa26.56■■□□□ 1.84
UBE2D3-214ENST00000503282 FLT1P17948 1338 aa26.56■■□□□ 1.84
UBE2D3-214ENST00000503282 SALL3Q9BXA9 1300 aa26.56■■□□□ 1.84
UBE2D3-214ENST00000503282 COL2A1P02458 1487 aaPredicted RBP26.55■■□□□ 1.84
UBE2D3-214ENST00000503282 MAP3K10Q02779 954 aa26.55■■□□□ 1.84
UBE2D3-214ENST00000503282 PI4KBQ9UBF8 816 aa26.55■■□□□ 1.84
UBE2D3-214ENST00000503282 STAP2Q9UGK3 403 aa26.55■■□□□ 1.84
UBE2D3-214ENST00000503282 CA12O43570 354 aa26.54■■□□□ 1.84
UBE2D3-214ENST00000503282 INPP5BP32019 993 aa26.54■■□□□ 1.84
UBE2D3-214ENST00000503282 SREBF2Q12772 1141 aa26.54■■□□□ 1.84
UBE2D3-214ENST00000503282 CRNKL1Q9BZJ0 848 aaKnown RBP26.54■■□□□ 1.84
UBE2D3-214ENST00000503282 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.54■■□□□ 1.84
UBE2D3-214ENST00000503282 OTOFQ9HC10 1997 aa26.54■■□□□ 1.84
UBE2D3-214ENST00000503282 TBC1D12O60347 775 aa26.53■■□□□ 1.84
UBE2D3-214ENST00000503282 CTCFP49711 727 aaPredicted RBP26.53■■□□□ 1.84
UBE2D3-214ENST00000503282 PDE1AP54750 535 aa26.53■■□□□ 1.84
UBE2D3-214ENST00000503282 INHBEP58166 350 aa26.53■■□□□ 1.84
UBE2D3-214ENST00000503282 LRRFIP1Q32MZ4 808 aaKnown RBP26.53■■□□□ 1.84
UBE2D3-214ENST00000503282 SLFNL1Q499Z3 407 aa26.53■■□□□ 1.84
UBE2D3-214ENST00000503282 SNCAIPQ9Y6H5 919 aa26.53■■□□□ 1.84
UBE2D3-214ENST00000503282 MANSC4A6NHS7 340 aaPredicted RBP26.52■■□□□ 1.84
UBE2D3-214ENST00000503282 TM4SF4P48230 202 aa26.52■■□□□ 1.84
UBE2D3-214ENST00000503282 ERO1BQ86YB8 467 aa26.52■■□□□ 1.84
UBE2D3-214ENST00000503282 SAP30BPQ9UHR5 308 aaKnown RBP26.52■■□□□ 1.84
UBE2D3-214ENST00000503282 PALD1Q9ULE6 856 aa26.52■■□□□ 1.84
UBE2D3-214ENST00000503282 CDK5RAP2Q96SN8 1893 aa26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 SPDYE5A6NIY4 337 aa26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 PHF20L1A8MW92 1017 aa26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 HLA-DOAP06340 250 aa26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 GJA5P36382 358 aa26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 CNKSR2Q8WXI2 1034 aa26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 OTUD5Q96G74 571 aa26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 ARMT1Q9H993 441 aa26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 HERC5Q9UII4 1024 aaKnown RBP26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 FOCADQ5VW36 1801 aa26.51■■□□□ 1.83
UBE2D3-214ENST00000503282 CHGBP05060 677 aa26.5■■□□□ 1.83
UBE2D3-214ENST00000503282 ZFYP08048 801 aaPredicted RBP26.5■■□□□ 1.83
UBE2D3-214ENST00000503282 SLURP2P0DP57 97 aa26.5■■□□□ 1.83
UBE2D3-214ENST00000503282 FOXP4Q8IVH2 680 aaPredicted RBP26.5■■□□□ 1.83
UBE2D3-214ENST00000503282 LCORLQ8N3X6 602 aa26.5■■□□□ 1.83
UBE2D3-214ENST00000503282 TRIM34Q9BYJ4 488 aa26.5■■□□□ 1.83
UBE2D3-214ENST00000503282 RNF186Q9NXI6 227 aa26.5■■□□□ 1.83
UBE2D3-214ENST00000503282 MYH7P12883 1935 aa26.49■■□□□ 1.83
UBE2D3-214ENST00000503282 FAM196BA6NMK8 535 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms