RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 KIAA2012Q0VF49 1180 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 FER1L6Q2WGJ9 1857 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 IGDCC4Q8TDY8 1250 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 MTA3Q9BTC8 594 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
SF3B1-211ENST00000487698 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 ROBO3Q96MS0 1386 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 CYP2D7A0A087X1C5 515 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 STX6O43752 255 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 CTDNEP1O95476 244 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 SGMS1Q86VZ5 419 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 NOL10Q9BSC4 688 aaKnown RBP11.11□□□□□ -0.63
SF3B1-211ENST00000487698 DBNDD1Q9H9R9 158 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 LY9Q9HBG7 655 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
SF3B1-211ENST00000487698 KLF18A0A0U1RQI7 1052 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 C21orf2O43822 256 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 ECE2O60344 883 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 JAK2O60674 1132 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 DTNBO60941 627 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
SF3B1-211ENST00000487698 LIFRP42702 1097 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 RHBDL3P58872 404 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 FKBP1AP62942 108 aaKnown RBP11.11□□□□□ -0.63
SF3B1-211ENST00000487698 NSUN7Q8NE18 718 aaKnown RBP11.11□□□□□ -0.63
SF3B1-211ENST00000487698 SUPT20HQ8NEM7 779 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
SF3B1-211ENST00000487698 DAGLAQ9Y4D2 1042 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 NID2Q14112 1375 aa11.11□□□□□ -0.63
SF3B1-211ENST00000487698 MYH15Q9Y2K3 1946 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 COL4A5P29400 1685 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 ORC4O43929 436 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 PDIA4P13667 645 aaKnown RBP11.1□□□□□ -0.63
SF3B1-211ENST00000487698 PLCG2P16885 1265 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 TGFB2P61812 414 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 EVX2Q03828 476 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 STRIP1Q5VSL9 837 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 CHMP4CQ96CF2 233 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 PSMD1Q99460 953 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 SGIP1Q9BQI5 828 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 SENP2Q9HC62 589 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 MTMR6Q9Y217 621 aa11.1□□□□□ -0.63
SF3B1-211ENST00000487698 GOLGA8BA8MQT2 603 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 G3V3G9 751 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 CYP2D6P10635 497 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 PDCP20941 246 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 POLD1P28340 1107 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 CCT2P78371 535 aaKnown RBP11.09□□□□□ -0.63
SF3B1-211ENST00000487698 R3HDM1Q15032 1099 aaKnown RBP11.09□□□□□ -0.63
SF3B1-211ENST00000487698 AOC3Q16853 763 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 TMEM67Q5HYA8 995 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 APOA5Q6Q788 366 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 RTKN2Q8IZC4 609 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 ESR2Q92731 530 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 MXD3Q9BW11 206 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 NCOA5Q9HCD5 579 aaKnown RBP11.09□□□□□ -0.63
SF3B1-211ENST00000487698 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 MCM9Q9NXL9 1143 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 ATF5Q9Y2D1 282 aaPredicted RBP11.09□□□□□ -0.63
SF3B1-211ENST00000487698 PTPDC1A2A3K4 754 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 USP17L8P0C7I0 530 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 USP5P45974 858 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 RRP12Q5JTH9 1297 aaKnown RBP11.09□□□□□ -0.63
SF3B1-211ENST00000487698 C12orf60Q5U649 245 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 FBXW7Q969H0 707 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
SF3B1-211ENST00000487698 MYH8P13535 1937 aa11.09□□□□□ -0.63
SF3B1-211ENST00000487698 IFIT3O14879 490 aaKnown RBP11.08□□□□□ -0.64
SF3B1-211ENST00000487698 F13A1P00488 732 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 HMGN5P82970 282 aaKnown RBP11.08□□□□□ -0.64
SF3B1-211ENST00000487698 SEC23AQ15436 765 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 FOXD4L5Q5VV16 416 aaPredicted RBP11.08□□□□□ -0.64
SF3B1-211ENST00000487698 LARP1BQ659C4 914 aaKnown RBP11.08□□□□□ -0.64
SF3B1-211ENST00000487698 HHIPL2Q6UWX4 724 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 TEX11Q8IYF3 940 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 STK11IPQ8N1F8 1099 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 TGFBRAP1Q8WUH2 860 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 FOXD4L4Q8WXT5 416 aaPredicted RBP11.08□□□□□ -0.64
SF3B1-211ENST00000487698 TOMM22Q9NS69 142 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 FLT1P17948 1338 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 ARFGEF1Q9Y6D6 1849 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 PPIP5K2O43314 1243 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 NT5C2P49902 561 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 SART3Q15020 963 aaKnown RBP11.08□□□□□ -0.64
SF3B1-211ENST00000487698 MRIQ9BWK5 157 aa11.08□□□□□ -0.64
SF3B1-211ENST00000487698 NAP1L2Q9ULW6 460 aaPredicted RBP11.08□□□□□ -0.64
SF3B1-211ENST00000487698 GOLGB1Q14789 3259 aaKnown RBP11.07□□□□□ -0.64
SF3B1-211ENST00000487698 MYH6P13533 1939 aa11.07□□□□□ -0.64
SF3B1-211ENST00000487698 USP17L3A6NCW0 530 aa11.07□□□□□ -0.64
SF3B1-211ENST00000487698 USP17L4A6NCW7 530 aa11.07□□□□□ -0.64
SF3B1-211ENST00000487698 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
SF3B1-211ENST00000487698 DHX16O60231 1041 aaKnown RBP11.07□□□□□ -0.64
SF3B1-211ENST00000487698 SLC3A2P08195 630 aaKnown RBP11.07□□□□□ -0.64
SF3B1-211ENST00000487698 PTMSP20962 102 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms