RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 TTC14Q96N46 770 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 SRPK1Q96SB4 655 aaKnown RBP6.67□□□□□ -1.34
SF1-217ENST00000486960 LRRC27Q9C0I9 530 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 SCUBE2Q9NQ36 999 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 POLG2Q9UHN1 485 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 INTUQ9ULD6 942 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 SPTBN4Q9H254 2564 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 POLR3AO14802 1390 aaPredicted RBP6.67□□□□□ -1.34
SF1-217ENST00000486960 MYH14Q7Z406 1995 aaKnown RBP6.66□□□□□ -1.34
SF1-217ENST00000486960 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 A6NJY4 79 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 TSPAN6O43657 245 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 PRMT3O60678 531 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 HMMRO75330 724 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 RNASEH2AO75792 299 aaKnown RBP6.66□□□□□ -1.34
SF1-217ENST00000486960 FGRP09769 529 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 ATICP31939 592 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 EIF4G2P78344 907 aaKnown RBP eCLIP6.66□□□□□ -1.34
SF1-217ENST00000486960 MAP3K9P80192 1104 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 FAM160A1Q05DH4 1040 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 SWI5Q1ZZU3 235 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 INO80DQ53TQ3 878 aaPredicted RBP6.66□□□□□ -1.34
SF1-217ENST00000486960 RSBN1LQ6PCB5 846 aaPredicted RBP6.66□□□□□ -1.34
SF1-217ENST00000486960 C3orf67Q6ZVT6 689 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 KRT77Q7Z794 578 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 SAPCD2Q86UD0 394 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 IFNL3Q8IZI9 196 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 PNMA1Q8ND90 353 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 MYRIPQ8NFW9 859 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 SPIRE2Q8WWL2 714 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 PPCSQ9HAB8 311 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 CCDC87Q9NVE4 849 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 ASAP1Q9ULH1 1129 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 COL11A2P13942 1736 aaPredicted RBP6.66□□□□□ -1.34
SF1-217ENST00000486960 PIK3C2GO75747 1445 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 TRANK1O15050 2925 aa6.66□□□□□ -1.34
SF1-217ENST00000486960 ZDBF2Q9HCK1 2354 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 ANKRD31Q8N7Z5 1873 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 USP17L3A6NCW0 530 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 USP17L4A6NCW7 530 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 PEX19P40855 299 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 PSMC1P62191 440 aaKnown RBP6.65□□□□□ -1.34
SF1-217ENST00000486960 PSMD2Q13200 908 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 MTA1Q13330 715 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 SERINC3Q13530 473 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 NFE2Q16621 373 aaPredicted RBP6.65□□□□□ -1.34
SF1-217ENST00000486960 GRAMD1BQ3KR37 738 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 ALDH1L2Q3SY69 923 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 CRTC2Q53ET0 693 aaPredicted RBP6.65□□□□□ -1.34
SF1-217ENST00000486960 CC2D1BQ5T0F9 858 aaKnown RBP6.65□□□□□ -1.34
SF1-217ENST00000486960 USP17L2Q6R6M4 530 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 USP17L1Q7RTZ2 530 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 ANKRD23Q86SG2 305 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 ALYREFQ86V81 257 aaKnown RBP6.65□□□□□ -1.34
SF1-217ENST00000486960 RNF135Q8IUD6 432 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 EGFL6Q8IUX8 553 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 RAVER1Q8IY67 606 aaKnown RBP6.65□□□□□ -1.34
SF1-217ENST00000486960 STK11IPQ8N1F8 1099 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 NFATC2IPQ8NCF5 419 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 LINC00116Q8NCU8 138 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 LSM14AQ8ND56 463 aaKnown RBP6.65□□□□□ -1.34
SF1-217ENST00000486960 APPBP2Q92624 585 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 C12orf49Q9H741 205 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 CHST12Q9NRB3 414 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 FANCLQ9NW38 375 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 RNF186Q9NXI6 227 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 FBXO2Q9UK22 296 aaPredicted RBP6.65□□□□□ -1.34
SF1-217ENST00000486960 MRPS23Q9Y3D9 190 aaKnown RBP6.65□□□□□ -1.34
SF1-217ENST00000486960 RABGAP1Q9Y3P9 1069 aa6.65□□□□□ -1.34
SF1-217ENST00000486960 USP47Q96K76 1375 aa6.65□□□□□ -1.35
SF1-217ENST00000486960 NFAT5O94916 1531 aa6.65□□□□□ -1.35
SF1-217ENST00000486960 LTN1O94822 1766 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 DCHS1Q96JQ0 3298 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 SLC26A4O43511 780 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 PRPF40AO75400 957 aaKnown RBP6.64□□□□□ -1.35
SF1-217ENST00000486960 TRPA1O75762 1119 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 EPHB1P54762 984 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 ERFEQ4G0M1 354 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 ALFQ53S48 1182 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 CCDC93Q567U6 631 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 USP48Q86UV5 1035 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 HSCBQ8IWL3 235 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 SMAP1Q8IYB5 467 aaPredicted RBP6.64□□□□□ -1.35
SF1-217ENST00000486960 DEFB123Q8N688 67 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 VPS37AQ8NEZ2 397 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 DDX12PQ92771 950 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 ERP27Q96DN0 273 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 MS4A4AQ96JQ5 239 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 STAC3Q96MF2 364 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 AGBL1Q96MI9 1066 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 MTMR10Q9NXD2 777 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 DDX41Q9UJV9 622 aaKnown RBP6.64□□□□□ -1.35
SF1-217ENST00000486960 BOLA1Q9Y3E2 137 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 PPP2R3BQ9Y5P8 575 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 FAM208AQ9UK61 1670 aaKnown RBP6.64□□□□□ -1.35
SF1-217ENST00000486960 NRXN2Q9P2S2 1712 aa6.64□□□□□ -1.35
SF1-217ENST00000486960 EPG5Q9HCE0 2579 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 NUP155O75694 1391 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 OATP04181 439 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms