RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 NWD2Q9ULI1 1742 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 POLR3GO15318 223 aaPredicted RBP16.38■□□□□ 0.21
NR1H3-220ENST00000481020 FOXP2O15409 715 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 CAPN2P17655 700 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 PNOCQ13519 176 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 LONRF2Q1L5Z9 754 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 TTC39AQ5SRH9 613 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 TTLL5Q6EMB2 1281 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 CHST3Q7LGC8 479 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 SGMS1Q86VZ5 419 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 WDR24Q96S15 920 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 EFCC1Q9HA90 598 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 FEZ2Q9UHY8 353 aaPredicted RBP16.38■□□□□ 0.21
NR1H3-220ENST00000481020 CEP131Q9UPN4 1083 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 IQSEC3Q9UPP2 1182 aaPredicted RBP16.38■□□□□ 0.21
NR1H3-220ENST00000481020 TBC1D2BQ9UPU7 963 aa16.38■□□□□ 0.21
NR1H3-220ENST00000481020 A0A1B0GTH6 734 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 AKR1B15C9JRZ8 316 aaPredicted RBP16.37■□□□□ 0.21
NR1H3-220ENST00000481020 KIF5CO60282 957 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 FECHP22830 423 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 MARCKSP29966 332 aaPredicted RBP16.37■□□□□ 0.21
NR1H3-220ENST00000481020 RCAN1P53805 252 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 TIMM10P62072 90 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 SLC39A6Q13433 755 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 MORC3Q14149 939 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 POSTNQ15063 836 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 PROSER2Q86WR7 435 aaPredicted RBP16.37■□□□□ 0.21
NR1H3-220ENST00000481020 SMARCE1Q969G3 411 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 CDC23Q9UJX2 597 aa16.37■□□□□ 0.21
NR1H3-220ENST00000481020 TRPM3Q9HCF6 1732 aaPredicted RBP16.37■□□□□ 0.21
NR1H3-220ENST00000481020 SH2B2O14492 632 aaPredicted RBP16.36■□□□□ 0.21
NR1H3-220ENST00000481020 SEC31AO94979 1220 aaKnown RBP16.36■□□□□ 0.21
NR1H3-220ENST00000481020 ACTN2P35609 894 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 NR1I3Q14994 352 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 TTF1Q15361 905 aaPredicted RBP16.36■□□□□ 0.21
NR1H3-220ENST00000481020 RILPL1Q5EBL4 403 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 SPATA20Q8TB22 786 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
NR1H3-220ENST00000481020 RASSF4Q9H2L5 321 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 ADAM21Q9UKJ8 722 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 TMEM232C9JQI7 657 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 PTPREP23469 700 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
NR1H3-220ENST00000481020 LIFRP42702 1097 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 PLCD1P51178 756 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 PIP4K2BP78356 416 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 SAFBQ15424 915 aaKnown RBP eCLIP16.36■□□□□ 0.21
NR1H3-220ENST00000481020 WASHC4Q2M389 1173 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 LONRF3Q496Y0 759 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 MAN1B1Q9UKM7 699 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 TTF2Q9UNY4 1162 aaKnown RBP16.36■□□□□ 0.21
NR1H3-220ENST00000481020 NFE2L3Q9Y4A8 694 aa16.36■□□□□ 0.21
NR1H3-220ENST00000481020 GLI3P10071 1580 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 ITIH6Q6UXX5 1313 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 NUP188Q5SRE5 1749 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 ATP5J2-PTCD1G3V325 749 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 PTCD1O75127 700 aaKnown RBP16.35■□□□□ 0.21
NR1H3-220ENST00000481020 MCM3P25205 808 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 ALX1Q15699 326 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 WHAMMP3Q1A5X7 153 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 NOM1Q5C9Z4 860 aaKnown RBP16.35■□□□□ 0.21
NR1H3-220ENST00000481020 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 LEKR1Q6ZMV7 388 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 CCDC12Q8WUD4 166 aaPredicted RBP16.35■□□□□ 0.21
NR1H3-220ENST00000481020 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
NR1H3-220ENST00000481020 FOXP1Q9H334 677 aaPredicted RBP16.35■□□□□ 0.21
NR1H3-220ENST00000481020 MKRN1Q9UHC7 482 aaKnown RBP16.35■□□□□ 0.21
NR1H3-220ENST00000481020 TJP1Q07157 1748 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
NR1H3-220ENST00000481020 A0A0G2JLW4 131 aa16.34■□□□□ 0.21
NR1H3-220ENST00000481020 RASGRP2Q7LDG7 609 aa16.34■□□□□ 0.21
NR1H3-220ENST00000481020 CNGA4Q8IV77 575 aa16.34■□□□□ 0.21
NR1H3-220ENST00000481020 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
NR1H3-220ENST00000481020 NOSTRINQ8IVI9 506 aa16.34■□□□□ 0.21
NR1H3-220ENST00000481020 DHX58Q96C10 678 aa16.34■□□□□ 0.21
NR1H3-220ENST00000481020 MED4Q9NPJ6 270 aa16.34■□□□□ 0.21
NR1H3-220ENST00000481020 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
NR1H3-220ENST00000481020 GPAA1O43292 621 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 ZBTB43O43298 467 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 UBE3CQ15386 1083 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 NTRK3Q16288 839 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 BEND6Q5SZJ8 279 aaPredicted RBP16.33■□□□□ 0.21
NR1H3-220ENST00000481020 TOGARAM2Q6ZUX3 1019 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 PPFIBP1Q86W92 1011 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 PDILTQ8N807 584 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 NEK11Q8NG66 645 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 PLA2G12BQ9BX93 195 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 ADGRG1Q9Y653 693 aa16.33■□□□□ 0.21
NR1H3-220ENST00000481020 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
NR1H3-220ENST00000481020 BMP6P22004 513 aa16.33■□□□□ 0.2
NR1H3-220ENST00000481020 ST5P78524 1137 aa16.33■□□□□ 0.2
NR1H3-220ENST00000481020 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
NR1H3-220ENST00000481020 TRIM14Q14142 442 aa16.33■□□□□ 0.2
NR1H3-220ENST00000481020 FILIP1LQ4L180 1135 aa16.33■□□□□ 0.2
NR1H3-220ENST00000481020 SPATA1Q5VX52 437 aa16.33■□□□□ 0.2
NR1H3-220ENST00000481020 GOLGA6L1Q8N7Z2 621 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms