RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 KSR2Q6VAB6 950 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 TAS1R3Q7RTX0 852 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 RTKN2Q8IZC4 609 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 ZBTB38Q8NAP3 1195 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-213ENST00000480102 XAGE3Q8WTP9 111 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 GLMNQ92990 594 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 ZSCAN10Q96SZ4 725 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-213ENST00000480102 PSMD1Q99460 953 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 METTL22Q9BUU2 404 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-213ENST00000480102 UTP14AQ9BVJ6 771 aaKnown RBP6.26□□□□□ -1.41
PTCD3-213ENST00000480102 STK31Q9BXU1 1019 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 DYRK1BQ9Y463 629 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 RTL9Q8NET4 1388 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 LAMB4A4D0S4 1761 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 SH3TC1Q8TE82 1336 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 SNED1Q8TER0 1413 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 A0A0G2JLW4 131 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 CDC14CA4D256 554 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 PCCAP05165 728 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-213ENST00000480102 LMNB1P20700 586 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 YY1P25490 414 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 SLFN5Q08AF3 891 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 TLR1Q15399 786 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 DIEXFQ68CQ4 756 aaKnown RBP6.25□□□□□ -1.41
PTCD3-213ENST00000480102 C2CD5Q86YS7 1000 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 PLEKHM2Q8IWE5 1019 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 GPR161Q8N6U8 529 aaKnown RBP6.25□□□□□ -1.41
PTCD3-213ENST00000480102 PLA2G12BQ9BX93 195 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 RTFDC1Q9BY42 306 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-213ENST00000480102 NOD1Q9Y239 953 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 PCDHGA11Q9Y5H2 935 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 PTPRCP08575 1304 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 CDHR2Q9BYE9 1310 aa6.25□□□□□ -1.41
PTCD3-213ENST00000480102 TMEM229AB2RXF0 380 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 ATP9BO43861 1147 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 MYL6BP14649 208 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 GTF2E1P29083 439 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-213ENST00000480102 GTF2IP78347 998 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 KRT24Q2M2I5 525 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 CCDC93Q567U6 631 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 SUSD4Q5VX71 490 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 PRPF40BQ6NWY9 871 aaKnown RBP6.24□□□□□ -1.41
PTCD3-213ENST00000480102 TBC1D9Q6ZT07 1266 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 SV2AQ7L0J3 742 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 FAM9BQ8IZU0 186 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 DEPDC4Q8N2C3 294 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 TSPYL6Q8N831 410 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 LINS1Q8NG48 757 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 ARHGAP45Q92619 1136 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 CUEDC1Q9NWM3 386 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-213ENST00000480102 BCS1LQ9Y276 419 aa6.24□□□□□ -1.41
PTCD3-213ENST00000480102 BCORQ6W2J9 1755 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 KIAA1551Q9HCM1 1747 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 USP17L3A6NCW0 530 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 USP17L4A6NCW7 530 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 ALDH1L1O75891 902 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 CHRNA5P30532 468 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 MMP14P50281 582 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 KRT76Q01546 638 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 EXOSC9Q06265 439 aaKnown RBP6.23□□□□□ -1.41
PTCD3-213ENST00000480102 NEXNQ0ZGT2 675 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 GNASQ5JWF2 1037 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 TMEM214Q6NUQ4 689 aaKnown RBP6.23□□□□□ -1.41
PTCD3-213ENST00000480102 USP17L2Q6R6M4 530 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 BICDL1Q6ZP65 573 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 USP17L1Q7RTZ2 530 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 VWA5B2Q8N398 1253 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 RHBDD1Q8TEB9 315 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 RBM17Q96I25 401 aaKnown RBP6.23□□□□□ -1.41
PTCD3-213ENST00000480102 GMCL1Q96IK5 515 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 TAOK3Q9H2K8 898 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 TIMMDC1Q9NPL8 285 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 CWC25Q9NXE8 425 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-213ENST00000480102 TRMT112Q9UI30 125 aaKnown RBP6.23□□□□□ -1.41
PTCD3-213ENST00000480102 ATP6V0A2Q9Y487 856 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 LAS1LQ9Y4W2 734 aaKnown RBP6.23□□□□□ -1.41
PTCD3-213ENST00000480102 UTYO14607 1347 aa6.23□□□□□ -1.41
PTCD3-213ENST00000480102 ABCC12Q96J65 1359 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 PI4KAP2A4QPH2 592 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 H7C1W4 665 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 NFKBIEO00221 500 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 NPHP1O15259 732 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-213ENST00000480102 PIP4K2AP48426 406 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-213ENST00000480102 FKBP4Q02790 459 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTCD3-213ENST00000480102 C4orf17Q53FE4 359 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 SP8Q8IXZ3 490 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 TRIM22Q8IYM9 498 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 PI4KAP1Q8N8J0 262 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 ZSCAN1Q8NBB4 408 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 DNAAF4Q8WXU2 420 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 TSR2Q969E8 191 aaKnown RBP6.22□□□□□ -1.41
PTCD3-213ENST00000480102 ZNF837Q96EG3 531 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-213ENST00000480102 GAS2L1Q99501 681 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-213ENST00000480102 COL25A1Q9BXS0 654 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-213ENST00000480102 PODXL2Q9NZ53 605 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 KDM2BQ8NHM5 1336 aa6.22□□□□□ -1.41
PTCD3-213ENST00000480102 A0A1B0GTH6 734 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 NEURL1BA8MQ27 555 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 IGKV5-2P06315 115 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms