RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 UBN2Q6ZU65 1347 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 SH3TC1Q8TE82 1336 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 hCG_1642624A0A1W2PR95 340 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 PCCAP05165 728 aaPredicted RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 CYP19A1P11511 503 aaPredicted RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 CTSWP56202 376 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 HSP90AA4PQ58FG1 418 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 C11orf57Q6ZUT1 292 aaPredicted RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 CCDC186Q7Z3E2 898 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 TBC1D10CQ8IV04 446 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 MAGEB6Q8N7X4 407 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 PIBF1Q8WXW3 757 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 MPHOSPH8Q99549 860 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 SDF4Q9BRK5 362 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 SUDS3Q9H7L9 328 aaPredicted RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 AKAP2Q9Y2D5 859 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 CPDO75976 1380 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 PALLDQ8WX93 1383 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 KDM4FA0A1W2PPD8 638 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 ANTXR2P58335 489 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 TOMM20Q15388 145 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 TSGA10IPQ3SY00 556 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 SPECC1Q5M775 1068 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 SUSD4Q5VX71 490 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 PPP4R4Q6NUP7 873 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 DSCC1Q9BVC3 393 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 RMI1Q9H9A7 625 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 UTRNP46939 3433 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 CYB5R4Q7L1T6 521 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 FILIP1Q7Z7B0 1213 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 ILDR1Q86SU0 546 aaPredicted RBP7□□□□□ -1.29
SH3D19-207ENST00000478503 SLC51AQ86UW1 340 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 AIDAQ96BJ3 306 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 C8orf76Q96K31 380 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 NAP1L4Q99733 375 aaKnown RBP7□□□□□ -1.29
SH3D19-207ENST00000478503 PRDM4Q9UKN5 801 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 STRCP1A6NGW2 1772 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 ZC3H4Q9UPT8 1303 aaKnown RBP7□□□□□ -1.29
SH3D19-207ENST00000478503 TNNT1P13805 278 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 BDNFP23560 247 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 RRM1P23921 792 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 MECOMQ03112 1051 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 TRDNQ13061 729 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
SH3D19-207ENST00000478503 NOLC1Q14978 699 aaKnown RBP eCLIP7□□□□□ -1.29
SH3D19-207ENST00000478503 PTPROQ16827 1216 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 PTF1AQ7RTS3 328 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 AMOTL1Q8IY63 956 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 FAM200AQ8TCP9 573 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 KCNF1Q9H3M0 494 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 ARHGEF10LQ9HCE6 1279 aa7□□□□□ -1.29
SH3D19-207ENST00000478503 KIF28PB7ZC32 967 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 LETM1O95202 739 aaPredicted RBP6.99□□□□□ -1.29
SH3D19-207ENST00000478503 MBD4O95243 580 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 STK38Q15208 465 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 APPBP2Q92624 585 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 TRIM34Q9BYJ4 488 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 SFMBT1Q9UHJ3 866 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 NIP7Q9Y221 180 aaKnown RBP eCLIP6.99□□□□□ -1.29
SH3D19-207ENST00000478503 A6NJR5 290 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 MINDY4BA8MYZ0 360 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 PRDM1O75626 825 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 MCM5P33992 734 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 PSEN1P49768 467 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 MCM6Q14566 821 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 CCDC73Q6ZRK6 1079 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 ARHGEF1Q92888 912 aaKnown RBP6.99□□□□□ -1.29
SH3D19-207ENST00000478503 PDE8BO95263 885 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 PDE6AP16499 860 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 RASGRF1Q13972 1273 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 DNAJC14Q6Y2X3 702 aaPredicted RBP6.99□□□□□ -1.29
SH3D19-207ENST00000478503 NCOA7Q8NI08 942 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 NUP133Q8WUM0 1156 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 PAGR1Q9BTK6 254 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 NBPF3Q9H094 633 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 CLSTN2Q9H4D0 955 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 CFAP45Q9UL16 551 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 PCDHA7Q9UN72 937 aa6.99□□□□□ -1.29
SH3D19-207ENST00000478503 ARIH1Q9Y4X5 557 aaPredicted RBP6.99□□□□□ -1.29
SH3D19-207ENST00000478503 CARMIL3Q8ND23 1372 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 CYP2D7A0A087X1C5 515 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 BECN2A8MW95 431 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 KINO60870 393 aaKnown RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 CIAO1O76071 339 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 SF3B2Q13435 895 aaKnown RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 PUS10Q3MIT2 529 aaKnown RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 SDR16C5Q8N3Y7 309 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 SMARCC2Q8TAQ2 1214 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 SDR42E1Q8WUS8 393 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 CEP89Q96ST8 783 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 HPS5Q9UPZ3 1129 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 SCN11AQ9UI33 1791 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 USP54Q70EL1 1684 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 ALS2Q96Q42 1657 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 CSF1RP07333 972 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 CDC27P30260 824 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 CRKLP46109 303 aaKnown RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 GYG1P46976 350 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 NDUFA8P51970 172 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms