RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SELENOOQ9BVL4 669 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 KRTAP17-1Q9BYP8 105 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 ASPSCR1Q9BZE9 553 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 ZFYVE1Q9HBF4 777 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 IFT122Q9HBG6 1241 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SLC5A4Q9NY91 659 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SERTAD1Q9UHV2 236 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 TAGLN3Q9UI15 199 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 PPM1HQ9ULR3 514 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 NOL7Q9UMY1 257 aaKnown RBP3.55□□□□□ -1.84
HMGN4-202ENST00000477243 LHX6Q9UPM6 363 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 TRAK1Q9UPV9 953 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 MUC6Q6W4X9 2439 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 PEG3Q9GZU2 1588 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 PRG4Q92954 1404 aaPredicted RBP3.54□□□□□ -1.84
HMGN4-202ENST00000477243 DNAJC25-GNG10A0A024R161 153 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 ANO9A1A5B4 782 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 SERTM1A2A2V5 107 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 IQCA1LA6NCM1 817 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 CDK2AP1O14519 115 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 ZPR1O75312 459 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 TNFRSF21O75509 655 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 DXOO77932 396 aaKnown RBP3.54□□□□□ -1.84
HMGN4-202ENST00000477243 DDAH1O94760 285 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 FAM163BP0C2L3 166 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 SMTNP53814 917 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 HIRAP54198 1017 aaPredicted RBP3.54□□□□□ -1.84
HMGN4-202ENST00000477243 CASP7P55210 303 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 DGKZQ13574 1117 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 SLC9A5Q14940 896 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 SNAP47Q5SQN1 464 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 FAM83BQ5T0W9 1011 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 C1orf53Q5VUE5 145 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 ANO1Q5XXA6 986 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PRPF40BQ6NWY9 871 aaKnown RBP3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PI16Q6UXB8 463 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 SV2BQ7L1I2 683 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 RNF180Q86T96 592 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 ZBTB46Q86UZ6 589 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 LAPTM4BQ86VI4 370 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PPHLN1Q8NEY8 458 aaKnown RBP3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PJA1Q8NG27 643 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 WDR66Q8TBY9 1149 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PI4K2BQ8TCG2 481 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 GPR152Q8TDT2 470 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 SNX29Q8TEQ0 813 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PMEPA1Q969W9 287 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 THAP11Q96EK4 314 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 TTC14Q96N46 770 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 FERD3LQ96RJ6 166 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 KIF2CQ99661 725 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 RUSC1Q9BVN2 902 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 SARGQ9BW04 601 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 CSRNP2Q9H175 543 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 UNC93B1Q9H1C4 597 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 GGNBP2Q9H3C7 697 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 ZFYVE28Q9HCC9 887 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 NGRNQ9NPE2 291 aaKnown RBP3.54□□□□□ -1.84
HMGN4-202ENST00000477243 POLG2Q9UHN1 485 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PFDN2Q9UHV9 154 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PUF60Q9UHX1 559 aaKnown RBP3.54□□□□□ -1.84
HMGN4-202ENST00000477243 KLF15Q9UIH9 416 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 ZMYM5Q9UJ78 669 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 ZNF180Q9UJW8 692 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 FRMD4BQ9Y2L6 1034 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 DAAM1Q9Y4D1 1078 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 CICQ96RK0 1608 aaPredicted RBP3.54□□□□□ -1.84
HMGN4-202ENST00000477243 GLI2P10070 1586 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 DLC1Q96QB1 1528 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PLB1Q6P1J6 1458 aa3.54□□□□□ -1.84
HMGN4-202ENST00000477243 MAGI1Q96QZ7 1491 aaPredicted RBP3.54□□□□□ -1.84
HMGN4-202ENST00000477243 PHLDB1Q86UU1 1377 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 ZNF292O60281 2723 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 RPGRIP1LQ68CZ1 1315 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 TARBP1Q13395 1621 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 TMEM238LA0A1B0GVL6 79 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 POTEB3A0JP26 581 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 RASSF10A6NK89 507 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 SOBPA7XYQ1 873 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 TNFRSF10AO00220 468 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 IRS4O14654 1257 aaPredicted RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 BRINP1O60477 761 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 KATNA1O75449 491 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 GJB6O95452 261 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 NPTXRO95502 500 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 GNRH1P01148 92 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 ARAFP10398 606 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 IRS1P35568 1242 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 DGKGP49619 791 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 ZNF165P49910 485 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 MMP16P51512 607 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 ERVK-9P63128 1117 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 LMNB2Q03252 620 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 PABPC4Q13310 644 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 PDE1CQ14123 709 aaPredicted RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 KRT72Q14CN4 511 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 MTFR1Q15390 333 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 PUM3Q15397 648 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 PPP2R5EQ16537 467 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 HIF1AQ16665 826 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms