RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 ZNF697Q5TEC3 545 aa15.41■□□□□ 0.06
SBF1-208ENST00000477234 TRMT44Q8IYL2 757 aaKnown RBP15.41■□□□□ 0.06
SBF1-208ENST00000477234 SCYL3Q8IZE3 742 aa15.41■□□□□ 0.06
SBF1-208ENST00000477234 WDR66Q8TBY9 1149 aa15.41■□□□□ 0.06
SBF1-208ENST00000477234 C9orf78Q9NZ63 289 aaPredicted RBP15.41■□□□□ 0.06
SBF1-208ENST00000477234 ZHX2Q9Y6X8 837 aa15.41■□□□□ 0.06
SBF1-208ENST00000477234 KIF16BQ96L93 1317 aa15.41■□□□□ 0.06
SBF1-208ENST00000477234 POTEB2H3BUK9 544 aa15.4■□□□□ 0.06
SBF1-208ENST00000477234 GADL1Q6ZQY3 521 aa15.4■□□□□ 0.06
SBF1-208ENST00000477234 DIS3LQ8TF46 1054 aaKnown RBP15.4■□□□□ 0.06
SBF1-208ENST00000477234 LBHD1Q9BQE6 289 aaPredicted RBP15.4■□□□□ 0.06
SBF1-208ENST00000477234 OGDHLQ9ULD0 1010 aa15.4■□□□□ 0.06
SBF1-208ENST00000477234 LRRFIP2Q9Y608 721 aaKnown RBP15.4■□□□□ 0.06
SBF1-208ENST00000477234 GRM8O00222 908 aa15.39■□□□□ 0.05
SBF1-208ENST00000477234 SYN1P17600 705 aa15.39■□□□□ 0.05
SBF1-208ENST00000477234 G2E3Q7L622 706 aa15.39■□□□□ 0.05
SBF1-208ENST00000477234 ZNF594Q96JF6 807 aaPredicted RBP15.39■□□□□ 0.05
SBF1-208ENST00000477234 TBC1D2Q9BYX2 928 aa15.39■□□□□ 0.05
SBF1-208ENST00000477234 CTNND1O60716 968 aaKnown RBP15.38■□□□□ 0.05
SBF1-208ENST00000477234 IFIT1P09914 478 aaKnown RBP15.38■□□□□ 0.05
SBF1-208ENST00000477234 PTPRAP18433 802 aa15.38■□□□□ 0.05
SBF1-208ENST00000477234 ANKRD13CQ8N6S4 541 aa15.38■□□□□ 0.05
SBF1-208ENST00000477234 PROCA1Q8NCQ7 364 aaPredicted RBP15.38■□□□□ 0.05
SBF1-208ENST00000477234 AGTPBP1Q9UPW5 1226 aa15.38■□□□□ 0.05
SBF1-208ENST00000477234 AFG3L2Q9Y4W6 797 aa15.38■□□□□ 0.05
SBF1-208ENST00000477234 ZBED9Q6R2W3 1325 aa15.38■□□□□ 0.05
SBF1-208ENST00000477234 TCP10Q12799 353 aa15.37■□□□□ 0.05
SBF1-208ENST00000477234 METTL24Q5JXM2 366 aa15.37■□□□□ 0.05
SBF1-208ENST00000477234 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
SBF1-208ENST00000477234 PRKAG2Q9UGJ0 569 aa15.37■□□□□ 0.05
SBF1-208ENST00000477234 TTC28Q96AY4 2481 aa15.37■□□□□ 0.05
SBF1-208ENST00000477234 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
SBF1-208ENST00000477234 PDE8BO95263 885 aa15.36■□□□□ 0.05
SBF1-208ENST00000477234 BEND3Q5T5X7 828 aa15.36■□□□□ 0.05
SBF1-208ENST00000477234 IQSEC3Q9UPP2 1182 aaPredicted RBP15.36■□□□□ 0.05
SBF1-208ENST00000477234 DDX60LQ5H9U9 1706 aaKnown RBP15.36■□□□□ 0.05
SBF1-208ENST00000477234 ENTPD3O75355 529 aa15.35■□□□□ 0.05
SBF1-208ENST00000477234 CENPBP07199 599 aaPredicted RBP15.35■□□□□ 0.05
SBF1-208ENST00000477234 XRCC5P13010 732 aaKnown RBP15.35■□□□□ 0.05
SBF1-208ENST00000477234 CCDC27Q2M243 656 aa15.35■□□□□ 0.05
SBF1-208ENST00000477234 SLF2Q8IX21 1173 aa15.35■□□□□ 0.05
SBF1-208ENST00000477234 SOCS4Q8WXH5 440 aa15.35■□□□□ 0.05
SBF1-208ENST00000477234 GUCD1Q96NT3 240 aa15.35■□□□□ 0.05
SBF1-208ENST00000477234 PTPRFP10586 1907 aa15.35■□□□□ 0.05
SBF1-208ENST00000477234 PUM3Q15397 648 aaKnown RBP15.34■□□□□ 0.05
SBF1-208ENST00000477234 GRIK5Q16478 980 aa15.34■□□□□ 0.05
SBF1-208ENST00000477234 CDC42EP5Q6NZY7 148 aa15.34■□□□□ 0.05
SBF1-208ENST00000477234 ZGPATQ8N5A5 531 aaKnown RBP15.34■□□□□ 0.05
SBF1-208ENST00000477234 MAFAQ8NHW3 353 aaPredicted RBP15.34■□□□□ 0.05
SBF1-208ENST00000477234 TSR2Q969E8 191 aaKnown RBP15.34■□□□□ 0.05
SBF1-208ENST00000477234 GNL3LQ9NVN8 582 aaKnown RBP15.34■□□□□ 0.05
SBF1-208ENST00000477234 DAGLAQ9Y4D2 1042 aa15.34■□□□□ 0.05
SBF1-208ENST00000477234 IL16Q14005 1332 aa15.34■□□□□ 0.05
SBF1-208ENST00000477234 MYH13Q9UKX3 1938 aa15.33■□□□□ 0.05
SBF1-208ENST00000477234 TRIM75PA6NK02 468 aa15.33■□□□□ 0.04
SBF1-208ENST00000477234 PHF20L1A8MW92 1017 aa15.33■□□□□ 0.04
SBF1-208ENST00000477234 MAP3K10Q02779 954 aa15.33■□□□□ 0.04
SBF1-208ENST00000477234 PDE3AQ14432 1141 aa15.33■□□□□ 0.04
SBF1-208ENST00000477234 ZSCAN29Q8IWY8 852 aaPredicted RBP15.33■□□□□ 0.04
SBF1-208ENST00000477234 NUDT12Q9BQG2 462 aa15.33■□□□□ 0.04
SBF1-208ENST00000477234 USP40Q9NVE5 1235 aa15.33■□□□□ 0.04
SBF1-208ENST00000477234 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.04
SBF1-208ENST00000477234 DOCK2Q92608 1830 aa15.32■□□□□ 0.04
SBF1-208ENST00000477234 LDHBP07195 334 aaKnown RBP15.32■□□□□ 0.04
SBF1-208ENST00000477234 MDM2Q00987 491 aaPredicted RBP15.32■□□□□ 0.04
SBF1-208ENST00000477234 EPHA10Q5JZY3 1008 aa15.32■□□□□ 0.04
SBF1-208ENST00000477234 IDI2Q9BXS1 227 aa15.32■□□□□ 0.04
SBF1-208ENST00000477234 COL6A1P12109 1028 aa15.31■□□□□ 0.04
SBF1-208ENST00000477234 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
SBF1-208ENST00000477234 SLC5A1P13866 664 aa15.31■□□□□ 0.04
SBF1-208ENST00000477234 MAP3K21Q5TCX8 1036 aa15.31■□□□□ 0.04
SBF1-208ENST00000477234 CCAR1Q8IX12 1150 aaKnown RBP15.31■□□□□ 0.04
SBF1-208ENST00000477234 PUS3Q9BZE2 481 aaKnown RBP15.31■□□□□ 0.04
SBF1-208ENST00000477234 SRCIN1Q9C0H9 1055 aa15.31■□□□□ 0.04
SBF1-208ENST00000477234 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
SBF1-208ENST00000477234 GJD2Q9UKL4 321 aa15.31■□□□□ 0.04
SBF1-208ENST00000477234 PFASO15067 1338 aa15.31■□□□□ 0.04
SBF1-208ENST00000477234 DOCK1Q14185 1865 aa15.31■□□□□ 0.04
SBF1-208ENST00000477234 VCANP13611 3396 aa15.3■□□□□ 0.04
SBF1-208ENST00000477234 TMEM265A0A087WTH1 108 aa15.3■□□□□ 0.04
SBF1-208ENST00000477234 TBC1D12O60347 775 aa15.3■□□□□ 0.04
SBF1-208ENST00000477234 MSCO60682 206 aa15.3■□□□□ 0.04
SBF1-208ENST00000477234 COL9A1P20849 921 aa15.3■□□□□ 0.04
SBF1-208ENST00000477234 NFIAQ12857 509 aa15.3■□□□□ 0.04
SBF1-208ENST00000477234 GTF3C2Q8WUA4 911 aaPredicted RBP15.3■□□□□ 0.04
SBF1-208ENST00000477234 LPIN2Q92539 896 aa15.3■□□□□ 0.04
SBF1-208ENST00000477234 CDX2Q99626 313 aaPredicted RBP15.3■□□□□ 0.04
SBF1-208ENST00000477234 OSBPL5Q9H0X9 879 aaPredicted RBP15.3■□□□□ 0.04
SBF1-208ENST00000477234 SEMA3EO15041 775 aa15.29■□□□□ 0.04
SBF1-208ENST00000477234 ZKSCAN1P17029 563 aaPredicted RBP15.29■□□□□ 0.04
SBF1-208ENST00000477234 MAPK4P31152 587 aa15.29■□□□□ 0.04
SBF1-208ENST00000477234 VGLL2Q8N8G2 317 aa15.29■□□□□ 0.04
SBF1-208ENST00000477234 FAM161BQ96MY7 647 aa15.29■□□□□ 0.04
SBF1-208ENST00000477234 AS3MTQ9HBK9 375 aa15.29■□□□□ 0.04
SBF1-208ENST00000477234 MORF4L1Q9UBU8 362 aa15.29■□□□□ 0.04
SBF1-208ENST00000477234 SALL1Q9NSC2 1324 aa15.28■□□□□ 0.04
SBF1-208ENST00000477234 F6X3S4 739 aa15.28■□□□□ 0.04
SBF1-208ENST00000477234 RGS3P49796 1198 aa15.28■□□□□ 0.04
SBF1-208ENST00000477234 IRX3P78415 501 aaPredicted RBP15.28■□□□□ 0.04
SBF1-208ENST00000477234 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms