RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.1□□□□□ -0.15
BRD9-203ENST00000475706 ADGRA1Q86SQ6 560 aa14.1□□□□□ -0.15
BRD9-203ENST00000475706 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
BRD9-203ENST00000475706 SH3RF3Q8TEJ3 882 aaPredicted RBP14.1□□□□□ -0.15
BRD9-203ENST00000475706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.1□□□□□ -0.15
BRD9-203ENST00000475706 WRNIP1Q96S55 665 aa14.1□□□□□ -0.15
BRD9-203ENST00000475706 DDTLA6NHG4 134 aaPredicted RBP14.09□□□□□ -0.15
BRD9-203ENST00000475706 CA12O43570 354 aa14.09□□□□□ -0.15
BRD9-203ENST00000475706 MAP4K4O95819 1239 aaPredicted RBP14.09□□□□□ -0.15
BRD9-203ENST00000475706 PLCG2P16885 1265 aa14.09□□□□□ -0.15
BRD9-203ENST00000475706 DYNLL1P63167 89 aaKnown RBP14.09□□□□□ -0.15
BRD9-203ENST00000475706 SREBF2Q12772 1141 aa14.09□□□□□ -0.15
BRD9-203ENST00000475706 VGLL4Q14135 290 aa14.09□□□□□ -0.15
BRD9-203ENST00000475706 MIGA1Q8NAN2 632 aa14.09□□□□□ -0.15
BRD9-203ENST00000475706 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.09□□□□□ -0.15
BRD9-203ENST00000475706 EXOC6Q8TAG9 804 aa14.09□□□□□ -0.15
BRD9-203ENST00000475706 ZKSCAN4Q969J2 545 aaPredicted RBP14.09□□□□□ -0.15
BRD9-203ENST00000475706 OPTNQ96CV9 577 aa14.09□□□□□ -0.15
BRD9-203ENST00000475706 EDC3Q96F86 508 aaKnown RBP14.09□□□□□ -0.15
BRD9-203ENST00000475706 PRDM10Q9NQV6 1147 aa14.09□□□□□ -0.15
BRD9-203ENST00000475706 RNF186Q9NXI6 227 aa14.09□□□□□ -0.15
BRD9-203ENST00000475706 ZBTB47Q9UFB7 747 aaPredicted RBP14.09□□□□□ -0.15
BRD9-203ENST00000475706 MANSC4A6NHS7 340 aaPredicted RBP14.08□□□□□ -0.16
BRD9-203ENST00000475706 IGSF3O75054 1194 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 ZBTB48P10074 688 aaPredicted RBP14.08□□□□□ -0.16
BRD9-203ENST00000475706 ATP5JP18859 108 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 INPP5BP32019 993 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 PPP4CP60510 307 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 SH3BP5LQ7L8J4 393 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 TGFBRAP1Q8WUH2 860 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 PAG1Q9NWQ8 432 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 ATAD5Q96QE3 1844 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 RFX7Q2KHR2 1363 aa14.08□□□□□ -0.16
BRD9-203ENST00000475706 LAMB1P07942 1786 aa14.07□□□□□ -0.16
BRD9-203ENST00000475706 SLURP2P0DP57 97 aa14.07□□□□□ -0.16
BRD9-203ENST00000475706 GJA5P36382 358 aa14.07□□□□□ -0.16
BRD9-203ENST00000475706 TM4SF4P48230 202 aa14.07□□□□□ -0.16
BRD9-203ENST00000475706 MAPKAPK5Q8IW41 473 aa14.07□□□□□ -0.16
BRD9-203ENST00000475706 OTUD5Q96G74 571 aa14.07□□□□□ -0.16
BRD9-203ENST00000475706 GPATCH3Q96I76 525 aa14.07□□□□□ -0.16
BRD9-203ENST00000475706 DOCK1Q14185 1865 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
BRD9-203ENST00000475706 PDE6AP16499 860 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 IRX6P78412 446 aaPredicted RBP14.06□□□□□ -0.16
BRD9-203ENST00000475706 AAMPQ13685 434 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 SLC9C2Q5TAH2 1124 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 ANKRD45Q5TZF3 282 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 TNS4Q8IZW8 715 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 HAUS7Q99871 368 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 OSBPL5Q9H0X9 879 aaPredicted RBP14.06□□□□□ -0.16
BRD9-203ENST00000475706 ECHDC1Q9NTX5 307 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 SAGE1Q9NXZ1 904 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 SNCAIPQ9Y6H5 919 aa14.06□□□□□ -0.16
BRD9-203ENST00000475706 BAZ2AQ9UIF9 1905 aaKnown RBP14.05□□□□□ -0.16
BRD9-203ENST00000475706 TBC1D8O95759 1140 aa14.05□□□□□ -0.16
BRD9-203ENST00000475706 USP5P45974 858 aa14.05□□□□□ -0.16
BRD9-203ENST00000475706 INHBEP58166 350 aa14.05□□□□□ -0.16
BRD9-203ENST00000475706 TSHZ3Q63HK5 1081 aa14.05□□□□□ -0.16
BRD9-203ENST00000475706 ERO1BQ86YB8 467 aa14.05□□□□□ -0.16
BRD9-203ENST00000475706 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.05□□□□□ -0.16
BRD9-203ENST00000475706 ZNF112Q9UJU3 913 aa14.05□□□□□ -0.16
BRD9-203ENST00000475706 ZNF532Q9HCE3 1301 aa14.05□□□□□ -0.16
BRD9-203ENST00000475706 NAV1Q8NEY1 1877 aa14.05□□□□□ -0.16
BRD9-203ENST00000475706 SIPA1L1O43166 1804 aa14.04□□□□□ -0.16
BRD9-203ENST00000475706 MYH8P13535 1937 aa14.04□□□□□ -0.16
BRD9-203ENST00000475706 CCL15-CCL14A0A0B4J2E2 113 aa14.04□□□□□ -0.16
BRD9-203ENST00000475706 MAGEB6P1A0A0J9YX57 407 aa14.04□□□□□ -0.16
BRD9-203ENST00000475706 SPDYE5A6NIY4 337 aa14.04□□□□□ -0.16
BRD9-203ENST00000475706 FAM196BA6NMK8 535 aa14.04□□□□□ -0.16
BRD9-203ENST00000475706 HDAC1Q13547 482 aaPredicted RBP14.04□□□□□ -0.16
BRD9-203ENST00000475706 CCL15Q16663 113 aa14.04□□□□□ -0.16
BRD9-203ENST00000475706 SLC4A8Q2Y0W8 1093 aa14.04□□□□□ -0.16
BRD9-203ENST00000475706 GCC1Q96CN9 775 aa14.04□□□□□ -0.16
BRD9-203ENST00000475706 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.164e-7■■■□□ 15.7
BRD9-203ENST00000475706 RWDD1Q9H446 243 aaPredicted RBP14.04□□□□□ -0.16
BRD9-203ENST00000475706 SAP30BPQ9UHR5 308 aaKnown RBP14.04□□□□□ -0.16
BRD9-203ENST00000475706 GTF2A2P52657 109 aa14.03□□□□□ -0.16
BRD9-203ENST00000475706 OTUD7BQ6GQQ9 843 aa14.03□□□□□ -0.16
BRD9-203ENST00000475706 TMED8Q6PL24 325 aaPredicted RBP14.03□□□□□ -0.16
BRD9-203ENST00000475706 IFNL1Q8IU54 200 aa14.03□□□□□ -0.16
BRD9-203ENST00000475706 CERS3Q8IU89 383 aa14.03□□□□□ -0.16
BRD9-203ENST00000475706 OTUD7AQ8TE49 926 aaPredicted RBP14.03□□□□□ -0.16
BRD9-203ENST00000475706 TRIM34Q9BYJ4 488 aa14.03□□□□□ -0.16
BRD9-203ENST00000475706 DHX36Q9H2U1 1008 aaKnown RBP14.03□□□□□ -0.16
BRD9-203ENST00000475706 PALD1Q9ULE6 856 aa14.03□□□□□ -0.16
BRD9-203ENST00000475706 FLT1P17948 1338 aa14.03□□□□□ -0.16
BRD9-203ENST00000475706 ATRNL1Q5VV63 1379 aa14.03□□□□□ -0.16
BRD9-203ENST00000475706 PTPRFP10586 1907 aa14.02□□□□□ -0.16
BRD9-203ENST00000475706 PHIPQ8WWQ0 1821 aa14.02□□□□□ -0.16
BRD9-203ENST00000475706 COL2A1P02458 1487 aaPredicted RBP14.02□□□□□ -0.16
BRD9-203ENST00000475706 PHF20L1A8MW92 1017 aa14.02□□□□□ -0.17
BRD9-203ENST00000475706 IGF2BP3O00425 579 aaKnown RBP eCLIP14.02□□□□□ -0.17
BRD9-203ENST00000475706 IRF6O14896 467 aa14.02□□□□□ -0.17
BRD9-203ENST00000475706 TBC1D12O60347 775 aa14.02□□□□□ -0.17
BRD9-203ENST00000475706 ALDH1A1P00352 501 aa14.02□□□□□ -0.17
BRD9-203ENST00000475706 ADD2P35612 726 aa14.02□□□□□ -0.17
BRD9-203ENST00000475706 MAP3K10Q02779 954 aa14.02□□□□□ -0.17
BRD9-203ENST00000475706 PPATQ06203 517 aa14.02□□□□□ -0.17
BRD9-203ENST00000475706 PPIL2Q13356 520 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms