RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
LTN1-204ENST00000475344 C1GALT1Q9NS00 363 aa8.41□□□□□ -1.06
LTN1-204ENST00000475344 DCDC2CA8MYV0 355 aa8.4□□□□□ -1.06
LTN1-204ENST00000475344 ADAMTS4O75173 837 aa8.4□□□□□ -1.06
LTN1-204ENST00000475344 GP2P55259 537 aaKnown RBP8.4□□□□□ -1.06
LTN1-204ENST00000475344 CYP27A1Q02318 531 aa8.4□□□□□ -1.06
LTN1-204ENST00000475344 ZNF252P-AS1Q0IIN9 211 aa8.4□□□□□ -1.06
LTN1-204ENST00000475344 CPSF6Q16630 551 aaKnown RBP eCLIP8.4□□□□□ -1.06
LTN1-204ENST00000475344 PCNX4Q63HM2 1172 aa8.4□□□□□ -1.06
LTN1-204ENST00000475344 SEZ6L2Q6UXD5 910 aa8.4□□□□□ -1.06
LTN1-204ENST00000475344 DTX1Q86Y01 620 aa8.4□□□□□ -1.06
LTN1-204ENST00000475344 WNT11O96014 354 aa8.39□□□□□ -1.07
LTN1-204ENST00000475344 LRRC14Q15048 493 aa8.39□□□□□ -1.07
LTN1-204ENST00000475344 RASIP1Q5U651 963 aa8.39□□□□□ -1.07
LTN1-204ENST00000475344 FRMD6Q96NE9 622 aa8.39□□□□□ -1.07
LTN1-204ENST00000475344 PCDHA4Q9UN74 947 aa8.39□□□□□ -1.07
LTN1-204ENST00000475344 ANGEL1Q9UNK9 670 aaKnown RBP8.39□□□□□ -1.07
LTN1-204ENST00000475344 FAM87AP0C7U9 286 aa8.38□□□□□ -1.07
LTN1-204ENST00000475344 ZC3H12AQ5D1E8 599 aaKnown RBP8.38□□□□□ -1.07
LTN1-204ENST00000475344 PPM1JQ5JR12 505 aa8.38□□□□□ -1.07
LTN1-204ENST00000475344 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
LTN1-204ENST00000475344 ISL2Q96A47 359 aa8.38□□□□□ -1.07
LTN1-204ENST00000475344 TRIM37O94972 964 aa8.37□□□□□ -1.07
LTN1-204ENST00000475344 NEFMP07197 916 aa8.37□□□□□ -1.07
LTN1-204ENST00000475344 FGD1P98174 961 aa8.37□□□□□ -1.07
LTN1-204ENST00000475344 OGFOD3Q6PK18 319 aa8.37□□□□□ -1.07
LTN1-204ENST00000475344 C12orf40Q86WS4 652 aa8.37□□□□□ -1.07
LTN1-204ENST00000475344 GZF1Q9H116 711 aaPredicted RBP8.37□□□□□ -1.07
LTN1-204ENST00000475344 PCOLCE2Q9UKZ9 415 aa8.37□□□□□ -1.07
LTN1-204ENST00000475344 ERVK-24P63145 666 aa8.36□□□□□ -1.07
LTN1-204ENST00000475344 COL19A1Q14993 1142 aa8.36□□□□□ -1.07
LTN1-204ENST00000475344 CCDC85BQ15834 202 aaPredicted RBP8.36□□□□□ -1.07
LTN1-204ENST00000475344 MSMPQ1L6U9 139 aa8.36□□□□□ -1.07
LTN1-204ENST00000475344 CYP27C1Q4G0S4 372 aa8.36□□□□□ -1.07
LTN1-204ENST00000475344 RNF214Q8ND24 703 aa8.36□□□□□ -1.07
LTN1-204ENST00000475344 ELMO3Q96BJ8 720 aa8.36□□□□□ -1.07
LTN1-204ENST00000475344 PARP2Q9UGN5 583 aa8.36□□□□□ -1.07
LTN1-204ENST00000475344 CYP8B1Q9UNU6 501 aa8.36□□□□□ -1.07
LTN1-204ENST00000475344 OAS3Q9Y6K5 1087 aaKnown RBP8.36□□□□□ -1.07
LTN1-204ENST00000475344 AK5Q9Y6K8 562 aa8.36□□□□□ -1.07
LTN1-204ENST00000475344 LMNB1P20700 586 aa8.35□□□□□ -1.07
LTN1-204ENST00000475344 XPCQ01831 940 aaPredicted RBP8.35□□□□□ -1.07
LTN1-204ENST00000475344 PSMD2Q13200 908 aa8.35□□□□□ -1.07
LTN1-204ENST00000475344 MAP3K11Q16584 847 aa8.35□□□□□ -1.07
LTN1-204ENST00000475344 SV2BQ7L1I2 683 aa8.35□□□□□ -1.07
LTN1-204ENST00000475344 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
LTN1-204ENST00000475344 ZC3H7BQ9UGR2 993 aaKnown RBP8.35□□□□□ -1.07
LTN1-204ENST00000475344 PRAMEF27A3QJZ7 478 aa8.34□□□□□ -1.07
LTN1-204ENST00000475344 LEFTY1O75610 366 aa8.34□□□□□ -1.07
LTN1-204ENST00000475344 IRAK1P51617 712 aa8.34□□□□□ -1.07
LTN1-204ENST00000475344 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.07
LTN1-204ENST00000475344 DNAJC14Q6Y2X3 702 aaPredicted RBP8.34□□□□□ -1.07
LTN1-204ENST00000475344 ARHGAP27Q6ZUM4 889 aa8.34□□□□□ -1.07
LTN1-204ENST00000475344 FAM161BQ96MY7 647 aa8.34□□□□□ -1.07
LTN1-204ENST00000475344 CCDC39Q9UFE4 941 aa8.34□□□□□ -1.07
LTN1-204ENST00000475344 CCDC27Q2M243 656 aa8.33□□□□□ -1.08
LTN1-204ENST00000475344 MEI1Q5TIA1 1274 aa8.33□□□□□ -1.08
LTN1-204ENST00000475344 TOP6BLQ8N6T0 577 aa8.33□□□□□ -1.08
LTN1-204ENST00000475344 FAM181AQ8N9Y4 354 aa8.33□□□□□ -1.08
LTN1-204ENST00000475344 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
LTN1-204ENST00000475344 BSDC1Q9NW68 430 aaPredicted RBP8.33□□□□□ -1.08
LTN1-204ENST00000475344 CACNA2D2Q9NY47 1150 aa8.33□□□□□ -1.08
LTN1-204ENST00000475344 PTPN11Q06124 597 aaPredicted RBP8.32□□□□□ -1.08
LTN1-204ENST00000475344 CDC37L1Q7L3B6 337 aa8.32□□□□□ -1.08
LTN1-204ENST00000475344 TP53INP2Q8IXH6 220 aa8.32□□□□□ -1.08
LTN1-204ENST00000475344 INPP5AQ14642 412 aa8.31□□□□□ -1.08
LTN1-204ENST00000475344 LRFN4Q6PJG9 635 aa8.31□□□□□ -1.08
LTN1-204ENST00000475344 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.31□□□□□ -1.08
LTN1-204ENST00000475344 UBE3DQ7Z6J8 389 aa8.31□□□□□ -1.08
LTN1-204ENST00000475344 VSIG10LQ86VR7 867 aa8.31□□□□□ -1.08
LTN1-204ENST00000475344 FLCNQ8NFG4 579 aa8.31□□□□□ -1.08
LTN1-204ENST00000475344 DUSP23Q9BVJ7 150 aa8.31□□□□□ -1.08
LTN1-204ENST00000475344 SEPT6Q14141 434 aa8.3□□□□□ -1.08
LTN1-204ENST00000475344 ZBTB37Q5TC79 503 aa8.3□□□□□ -1.08
LTN1-204ENST00000475344 PLPPR2Q96GM1 343 aa8.3□□□□□ -1.08
LTN1-204ENST00000475344 PCDHB5Q9Y5E4 795 aa8.3□□□□□ -1.08
LTN1-204ENST00000475344 DAB2P98082 770 aa8.29□□□□□ -1.08
LTN1-204ENST00000475344 TAGLNQ01995 201 aaKnown RBP8.29□□□□□ -1.08
LTN1-204ENST00000475344 HDXQ7Z353 690 aa8.29□□□□□ -1.08
LTN1-204ENST00000475344 ABI1Q8IZP0 508 aa8.29□□□□□ -1.08
LTN1-204ENST00000475344 PLD6Q8N2A8 252 aaKnown RBP8.29□□□□□ -1.08
LTN1-204ENST00000475344 GAL3ST3Q96A11 431 aa8.29□□□□□ -1.08
LTN1-204ENST00000475344 PSMG3-AS1Q96PY0 264 aa8.29□□□□□ -1.08
LTN1-204ENST00000475344 MRS2Q9HD23 443 aa8.29□□□□□ -1.08
LTN1-204ENST00000475344 FANCGO15287 622 aa8.28□□□□□ -1.08
LTN1-204ENST00000475344 ITIH2P19823 946 aa8.28□□□□□ -1.08
LTN1-204ENST00000475344 NTF4P34130 210 aa8.28□□□□□ -1.08
LTN1-204ENST00000475344 CDK8P49336 464 aa8.28□□□□□ -1.08
LTN1-204ENST00000475344 LIG3P49916 1009 aa8.28□□□□□ -1.08
LTN1-204ENST00000475344 WIPI1Q5MNZ9 446 aaPredicted RBP8.28□□□□□ -1.08
LTN1-204ENST00000475344 MCTP1Q6DN14 999 aa8.28□□□□□ -1.08
LTN1-204ENST00000475344 FBXL18Q96ME1 805 aa8.28□□□□□ -1.08
LTN1-204ENST00000475344 PRNPP04156 253 aa8.27□□□□□ -1.09
LTN1-204ENST00000475344 ETF1P62495 437 aaKnown RBP8.27□□□□□ -1.09
LTN1-204ENST00000475344 TAF1CQ15572 869 aaPredicted RBP8.27□□□□□ -1.09
LTN1-204ENST00000475344 SCARA3Q6AZY7 606 aa8.27□□□□□ -1.09
LTN1-204ENST00000475344 FBXO33Q7Z6M2 555 aa8.27□□□□□ -1.09
LTN1-204ENST00000475344 NETO1Q8TDF5 533 aa8.27□□□□□ -1.09
LTN1-204ENST00000475344 VTI1BQ9UEU0 232 aa8.27□□□□□ -1.09
LTN1-204ENST00000475344 U3KQE9 123 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms