RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 WDR78Q5VTH9 848 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 AP1ARQ63HQ0 302 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 WWC2Q6AWC2 1192 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 PI16Q6UXB8 463 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 MCF2L2Q86YR7 1114 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 FMNL3Q8IVF7 1028 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 ZNF295-AS1Q8N0V1 137 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 TXLNBQ8N3L3 684 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 LSM14AQ8ND56 463 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 PDLIM2Q96JY6 352 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 UBA5Q9GZZ9 404 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 DNAJC25Q9H1X3 360 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 ZSWIM4Q9H7M6 989 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 ABCF2Q9UG63 623 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 GGT7Q9UJ14 662 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 GOLGA3Q08378 1498 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 OIP5O43482 229 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 CPNE3O75131 537 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 U2AF2P26368 475 aaKnown RBP eCLIP7.04□□□□□ -1.287e-7■■■■■ 29.7
ECHDC1-215ENST00000475319 SNRPNP63162 240 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 ADCY2Q08462 1091 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 GRIN2CQ14957 1233 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 PDCD2Q16342 344 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 HSP90AB2PQ58FF8 381 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 GORABQ5T7V8 394 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 SIN3AQ96ST3 1273 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 FHDC1Q9C0D6 1143 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 PANK3Q9H999 370 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 PGPEP1Q9NXJ5 209 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 NSFL1CQ9UNZ2 370 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 KTN1Q86UP2 1357 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 RAPGEF2Q9Y4G8 1499 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 GLI2P10070 1586 aa7.04□□□□□ -1.28
ECHDC1-215ENST00000475319 NAP1L1P55209 391 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 HNRNPH2P55795 449 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 CENPCQ03188 943 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 CLN3Q13286 438 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 AMOTQ4VCS5 1084 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 MEI1Q5TIA1 1274 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 USPL1Q5W0Q7 1092 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 ZKSCAN2Q63HK3 967 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 SDE2Q6IQ49 451 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 GET4Q7L5D6 327 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 MORC1Q86VD1 984 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 NLRP13Q86W25 1043 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 CACTIN-AS1Q8N1I8 211 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 KDF1Q8NAX2 398 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 TTC16Q8NEE8 873 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 ATL2Q8NHH9 583 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 GMCL1Q96IK5 515 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 OSBPL7Q9BZF2 842 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 CWC25Q9NXE8 425 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 CHMP5Q9NZZ3 219 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 TBX22Q9Y458 520 aa7.03□□□□□ -1.28
ECHDC1-215ENST00000475319 NPC1L1Q9UHC9 1359 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 MYO1CO00159 1063 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 PES1O00541 588 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 CTIFO43310 598 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 TPD52L2O43399 206 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 KINO60870 393 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 FGRP09769 529 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 RBM5P52756 815 aaKnown RBP eCLIP7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 RWDD2BP57060 319 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 NOLC1Q14978 699 aaKnown RBP eCLIP7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 APBB1IPQ7Z5R6 666 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 CD163Q86VB7 1156 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 VPS37DQ86XT2 251 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 MAF1Q9H063 256 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 C12orf49Q9H741 205 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 VEZTQ9HBM0 779 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 TOMM22Q9NS69 142 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 SUN2Q9UH99 717 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 BCS1LQ9Y276 419 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 USP31Q70CQ4 1352 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 SBNO2Q9Y2G9 1366 aa7.02□□□□□ -1.29
ECHDC1-215ENST00000475319 PAX4O43316 350 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 STK10O94804 968 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 ADH1AP07327 375 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 USP8P40818 1118 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 ICA1Q05084 483 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 NEXNQ0ZGT2 675 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 NLGN1Q8N2Q7 840 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 EPS8L3Q8TE67 593 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 SH3GL3Q99963 347 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 CTNNA3Q9UI47 895 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 AKNAQ7Z591 1439 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 CAND2O75155 1236 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 TXLNAP40222 546 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 GJA8P48165 433 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 PSMC1P62191 440 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 FOXD4Q12950 439 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 SOGA3Q5TF21 947 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 CCDC30Q5VVM6 783 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 TTLL5Q6EMB2 1281 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 EFCAB13Q8IY85 973 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 STAG1Q8WVM7 1258 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 CCDC74AQ96AQ1 378 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 ZNF396Q96N95 335 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 205.6 ms