RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 WNK4Q96J92 1243 aa17.27■□□□□ 0.35
VAMP4-203ENST00000474047 TSKSQ9UJT2 592 aa17.27■□□□□ 0.35
VAMP4-203ENST00000474047 MYO5AQ9Y4I1 1855 aaKnown RBP17.26■□□□□ 0.35
VAMP4-203ENST00000474047 ZBTB48P10074 688 aaPredicted RBP17.26■□□□□ 0.35
VAMP4-203ENST00000474047 TMED8Q6PL24 325 aaPredicted RBP17.26■□□□□ 0.35
VAMP4-203ENST00000474047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.35
VAMP4-203ENST00000474047 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
VAMP4-203ENST00000474047 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
VAMP4-203ENST00000474047 PAG1Q9NWQ8 432 aa17.26■□□□□ 0.35
VAMP4-203ENST00000474047 MAST2Q6P0Q8 1798 aa17.26■□□□□ 0.35
VAMP4-203ENST00000474047 MANSC4A6NHS7 340 aaPredicted RBP17.25■□□□□ 0.35
VAMP4-203ENST00000474047 TRPA1O75762 1119 aa17.25■□□□□ 0.35
VAMP4-203ENST00000474047 HSPA8P11142 646 aaKnown RBP17.25■□□□□ 0.35
VAMP4-203ENST00000474047 VGLL4Q14135 290 aa17.25■□□□□ 0.35
VAMP4-203ENST00000474047 SLC9C2Q5TAH2 1124 aa17.25■□□□□ 0.35
VAMP4-203ENST00000474047 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.25■□□□□ 0.35
VAMP4-203ENST00000474047 ADGRA1Q86SQ6 560 aa17.25■□□□□ 0.35
VAMP4-203ENST00000474047 CERS3Q8IU89 383 aa17.25■□□□□ 0.35
VAMP4-203ENST00000474047 EXOC6Q8TAG9 804 aa17.25■□□□□ 0.35
VAMP4-203ENST00000474047 OPTNQ96CV9 577 aa17.25■□□□□ 0.35
VAMP4-203ENST00000474047 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
VAMP4-203ENST00000474047 PPP4CP60510 307 aa17.24■□□□□ 0.35
VAMP4-203ENST00000474047 MIGA1Q8NAN2 632 aa17.24■□□□□ 0.35
VAMP4-203ENST00000474047 TGFBRAP1Q8WUH2 860 aa17.24■□□□□ 0.35
VAMP4-203ENST00000474047 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
VAMP4-203ENST00000474047 HAUS7Q99871 368 aa17.24■□□□□ 0.35
VAMP4-203ENST00000474047 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.24■□□□□ 0.35
VAMP4-203ENST00000474047 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
VAMP4-203ENST00000474047 PRDM10Q9NQV6 1147 aa17.24■□□□□ 0.35
VAMP4-203ENST00000474047 RNF186Q9NXI6 227 aa17.24■□□□□ 0.35
VAMP4-203ENST00000474047 DDTLA6NHG4 134 aaPredicted RBP17.24■□□□□ 0.35
VAMP4-203ENST00000474047 INHBEP58166 350 aa17.24■□□□□ 0.35
VAMP4-203ENST00000474047 ANKRD45Q5TZF3 282 aa17.24■□□□□ 0.35
VAMP4-203ENST00000474047 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
VAMP4-203ENST00000474047 USP5P45974 858 aa17.23■□□□□ 0.35
VAMP4-203ENST00000474047 TM4SF4P48230 202 aa17.23■□□□□ 0.35
VAMP4-203ENST00000474047 DYNLL1P63167 89 aaKnown RBP17.23■□□□□ 0.35
VAMP4-203ENST00000474047 HDAC1Q13547 482 aaPredicted RBP17.23■□□□□ 0.35
VAMP4-203ENST00000474047 COL13A1Q5TAT6 717 aaPredicted RBP17.23■□□□□ 0.35
VAMP4-203ENST00000474047 EDC3Q96F86 508 aaKnown RBP17.23■□□□□ 0.35
VAMP4-203ENST00000474047 OTUD5Q96G74 571 aa17.23■□□□□ 0.35
VAMP4-203ENST00000474047 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
VAMP4-203ENST00000474047 SAGE1Q9NXZ1 904 aa17.23■□□□□ 0.35
VAMP4-203ENST00000474047 RFX7Q2KHR2 1363 aa17.22■□□□□ 0.35
VAMP4-203ENST00000474047 SH3BP5LQ7L8J4 393 aa17.22■□□□□ 0.35
VAMP4-203ENST00000474047 MAPKAPK5Q8IW41 473 aa17.22■□□□□ 0.35
VAMP4-203ENST00000474047 MAGEB6P1A0A0J9YX57 407 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 PDE6AP16499 860 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 INPP5BP32019 993 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 OTUD7BQ6GQQ9 843 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 ERO1BQ86YB8 467 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.21■□□□□ 0.35
VAMP4-203ENST00000474047 PCNTO95613 3336 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 ERC2O15083 957 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 ZSCAN25Q6NSZ9 544 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 DHX36Q9H2U1 1008 aaKnown RBP17.21■□□□□ 0.35
VAMP4-203ENST00000474047 ZNF112Q9UJU3 913 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 SNCAIPQ9Y6H5 919 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 OTOFQ9HC10 1997 aa17.21■□□□□ 0.35
VAMP4-203ENST00000474047 ZNF532Q9HCE3 1301 aa17.2■□□□□ 0.34
VAMP4-203ENST00000474047 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
VAMP4-203ENST00000474047 SPDYE5A6NIY4 337 aa17.2■□□□□ 0.34
VAMP4-203ENST00000474047 ALDH1A1P00352 501 aa17.2■□□□□ 0.34
VAMP4-203ENST00000474047 GJA5P36382 358 aa17.2■□□□□ 0.34
VAMP4-203ENST00000474047 GTF2A2P52657 109 aa17.2■□□□□ 0.34
VAMP4-203ENST00000474047 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
VAMP4-203ENST00000474047 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
VAMP4-203ENST00000474047 PICK1Q9NRD5 415 aa17.2■□□□□ 0.34
VAMP4-203ENST00000474047 CRACR2BQ8N4Y2 399 aaPredicted RBP17.19■□□□□ 0.34
VAMP4-203ENST00000474047 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
VAMP4-203ENST00000474047 SAP30BPQ9UHR5 308 aaKnown RBP17.19■□□□□ 0.34
VAMP4-203ENST00000474047 FLT1P17948 1338 aa17.19■□□□□ 0.34
VAMP4-203ENST00000474047 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
VAMP4-203ENST00000474047 ATRNL1Q5VV63 1379 aa17.19■□□□□ 0.34
VAMP4-203ENST00000474047 HLA-DOAP06340 250 aa17.18■□□□□ 0.34
VAMP4-203ENST00000474047 IFNL1Q8IU54 200 aa17.18■□□□□ 0.34
VAMP4-203ENST00000474047 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
VAMP4-203ENST00000474047 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
VAMP4-203ENST00000474047 PALD1Q9ULE6 856 aa17.18■□□□□ 0.34
VAMP4-203ENST00000474047 TBC1D12O60347 775 aa17.18■□□□□ 0.34
VAMP4-203ENST00000474047 TBC1D8O95759 1140 aa17.18■□□□□ 0.34
VAMP4-203ENST00000474047 PPATQ06203 517 aa17.18■□□□□ 0.34
VAMP4-203ENST00000474047 CCL15-CCL14A0A0B4J2E2 113 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 FAM196BA6NMK8 535 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 CTNND1O60716 968 aaKnown RBP17.17■□□□□ 0.34
VAMP4-203ENST00000474047 CAPN15O75808 1086 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 CETPP11597 493 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 MX1P20591 662 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 ADD2P35612 726 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 MAP3K10Q02779 954 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 PPIL2Q13356 520 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 SNAPC2Q13487 334 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 CCL15Q16663 113 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 NOL9Q5SY16 702 aaKnown RBP17.17■□□□□ 0.34
VAMP4-203ENST00000474047 B4GALNT3Q6L9W6 998 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 SCYL3Q8IZE3 742 aa17.17■□□□□ 0.34
VAMP4-203ENST00000474047 HERC5Q9UII4 1024 aaKnown RBP17.17■□□□□ 0.34
VAMP4-203ENST00000474047 COL2A1P02458 1487 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms