RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 POLR3GLQ9BT43 218 aa6.17□□□□□ -1.42
LRCH3-214ENST00000473177 ZCCHC2Q9C0B9 1178 aaKnown RBP6.17□□□□□ -1.42
LRCH3-214ENST00000473177 RRAGCQ9HB90 399 aa6.17□□□□□ -1.42
LRCH3-214ENST00000473177 BIN2Q9UBW5 565 aaPredicted RBP6.17□□□□□ -1.42
LRCH3-214ENST00000473177 PCDHGC4Q9Y5F7 938 aa6.17□□□□□ -1.42
LRCH3-214ENST00000473177 MAPK8IP3Q9UPT6 1336 aa6.17□□□□□ -1.42
LRCH3-214ENST00000473177 CICQ96RK0 1608 aaPredicted RBP6.17□□□□□ -1.42
LRCH3-214ENST00000473177 ANKRD36BQ8N2N9 1353 aa6.17□□□□□ -1.42
LRCH3-214ENST00000473177 PIK3C2AO00443 1686 aa6.17□□□□□ -1.42
LRCH3-214ENST00000473177 KCPQ6ZWJ8 1503 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 OPLAHO14841 1288 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 ATXN7O15265 892 aaPredicted RBP6.16□□□□□ -1.42
LRCH3-214ENST00000473177 FAM157BP0CG42 384 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 INPP5BP32019 993 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 ZAP70P43403 619 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 IDH3AP50213 366 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 TMF1P82094 1093 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 NDFIP2Q9NV92 336 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 FAM13BQ9NYF5 915 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 NSD3Q9BZ95 1437 aa6.16□□□□□ -1.42
LRCH3-214ENST00000473177 H3BM21 787 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 FOXN1O15353 648 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 EFSO43281 561 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 GMPRP36959 345 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 CTCFP49711 727 aaPredicted RBP6.15□□□□□ -1.42
LRCH3-214ENST00000473177 ARSDP51689 593 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 WDR43Q15061 677 aaKnown RBP eCLIP6.15□□□□□ -1.42
LRCH3-214ENST00000473177 NFKBIBQ15653 356 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 TMCO4Q5TGY1 634 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 ZSCAN1Q8NBB4 408 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 EXOC6Q8TAG9 804 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 DCAF11Q8TEB1 546 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 CEP63Q96MT8 703 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 PRDM10Q9NQV6 1147 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 RNF181Q9P0P0 153 aa6.15□□□□□ -1.42
LRCH3-214ENST00000473177 C10orf71Q711Q0 1435 aa6.15□□□□□ -1.43
LRCH3-214ENST00000473177 COL18A1P39060 1754 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 TUBGCP6Q96RT7 1819 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 FZD6O60353 706 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 MZF1P28698 734 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-214ENST00000473177 TNP2Q05952 138 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 LAMC2Q13753 1193 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 CCDC27Q2M243 656 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 ATCAYQ86WG3 371 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 ANKRD24Q8TF21 1146 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 GTPBP3Q969Y2 492 aaKnown RBP6.14□□□□□ -1.43
LRCH3-214ENST00000473177 ABHD8Q96I13 439 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 CFHR5Q9BXR6 569 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 BRD7Q9NPI1 651 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 C11orf16Q9NQ32 467 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 PODXL2Q9NZ53 605 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 DCTN4Q9UJW0 460 aa6.14□□□□□ -1.43
LRCH3-214ENST00000473177 A0A0G2JLW4 131 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 CDC14CA4D256 554 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 CCDC85CA6NKD9 419 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 NDUFB5O43674 189 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 BNIP3LO60238 219 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 MAPTP10636 758 aaKnown RBP6.13□□□□□ -1.43
LRCH3-214ENST00000473177 EPB42P16452 691 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 VEGFBP49765 207 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 TGFB2P61812 414 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 FOXR1Q6PIV2 292 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 SV2AQ7L0J3 742 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 VWA5B2Q8N398 1253 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 PIK3R5Q8WYR1 880 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 CITED4Q96RK1 184 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 BRPF3Q9ULD4 1205 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 ATXN7L1Q9ULK2 861 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-214ENST00000473177 RTCBQ9Y3I0 505 aaKnown RBP6.13□□□□□ -1.43
LRCH3-214ENST00000473177 LAS1LQ9Y4W2 734 aaKnown RBP6.13□□□□□ -1.43
LRCH3-214ENST00000473177 CGNL1Q0VF96 1302 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 TTC21AQ8NDW8 1320 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 NSD2O96028 1365 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 PXDNLA1KZ92 1463 aa6.13□□□□□ -1.43
LRCH3-214ENST00000473177 GOLGB1Q14789 3259 aaKnown RBP6.13□□□□□ -1.43
LRCH3-214ENST00000473177 DCDC2BA2VCK2 349 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 KHNYNO15037 678 aaKnown RBP6.12□□□□□ -1.43
LRCH3-214ENST00000473177 PDGFAP04085 211 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 RPLP1P05386 114 aaKnown RBP6.12□□□□□ -1.43
LRCH3-214ENST00000473177 MMP10P09238 476 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 GRNP28799 593 aaKnown RBP6.12□□□□□ -1.43
LRCH3-214ENST00000473177 USP5P45974 858 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 MARSP56192 900 aaKnown RBP6.12□□□□□ -1.43
LRCH3-214ENST00000473177 DNM1Q05193 864 aaKnown RBP6.12□□□□□ -1.43
LRCH3-214ENST00000473177 PDE3AQ14432 1141 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 TTC21BQ7Z4L5 1316 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 GPR152Q8TDT2 470 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 PALLDQ8WX93 1383 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 EDEM1Q92611 657 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 TRERF1Q96PN7 1200 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 RBCK1Q9BYM8 510 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 QRICH2Q9H0J4 1663 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 CCDC87Q9NVE4 849 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 HCN2Q9UL51 889 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 PHF24Q9UPV7 400 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 KCNH4Q9UQ05 1017 aa6.12□□□□□ -1.43
LRCH3-214ENST00000473177 NFAT5O94916 1531 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 CENPJQ9HC77 1338 aaPredicted RBP6.11□□□□□ -1.43
LRCH3-214ENST00000473177 ST20-MTHFSA0A0A6YYL1 179 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 VSIG8P0DPA2 414 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms