RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 NFXL1Q6ZNB6 911 aa20.21■□□□□ 0.83
RRP1-202ENST00000471909 DDX19AQ9NUU7 478 aaKnown RBP20.21■□□□□ 0.83
RRP1-202ENST00000471909 TFCP2L1Q9NZI6 479 aa20.21■□□□□ 0.83
RRP1-202ENST00000471909 ZBTB43O43298 467 aa20.21■□□□□ 0.83
RRP1-202ENST00000471909 CCDC192P0DO97 292 aa20.21■□□□□ 0.83
RRP1-202ENST00000471909 NFIXQ14938 502 aa20.21■□□□□ 0.83
RRP1-202ENST00000471909 TRPC5Q9UL62 973 aaPredicted RBP20.21■□□□□ 0.83
RRP1-202ENST00000471909 C4AP0C0L4 1744 aa20.21■□□□□ 0.83
RRP1-202ENST00000471909 SEMA3EO15041 775 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 AP5Z1O43299 807 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
RRP1-202ENST00000471909 CCDC144CPQ8IYA2 1237 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 STK11IPQ8N1F8 1099 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 CERKQ8TCT0 537 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 MYL10Q9BUA6 226 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 BCL11BQ9C0K0 894 aaPredicted RBP20.2■□□□□ 0.82
RRP1-202ENST00000471909 TNMDQ9H2S6 317 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 KCNF1Q9H3M0 494 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 FAM217BQ9NTX9 383 aaPredicted RBP20.2■□□□□ 0.82
RRP1-202ENST00000471909 SBF2Q86WG5 1849 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 NPHP1O15259 732 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 PPARAQ07869 468 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 CLSTN2Q9H4D0 955 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
RRP1-202ENST00000471909 HIBADHP31937 336 aaKnown RBP20.19■□□□□ 0.82
RRP1-202ENST00000471909 SPC24Q8NBT2 197 aa20.19■□□□□ 0.82
RRP1-202ENST00000471909 TOMM22Q9NS69 142 aa20.19■□□□□ 0.82
RRP1-202ENST00000471909 PYCARDQ9ULZ3 195 aa20.19■□□□□ 0.82
RRP1-202ENST00000471909 DYNLL1P63167 89 aaKnown RBP20.19■□□□□ 0.82
RRP1-202ENST00000471909 NTRK3Q16288 839 aa20.19■□□□□ 0.82
RRP1-202ENST00000471909 PHKBQ93100 1093 aa20.19■□□□□ 0.82
RRP1-202ENST00000471909 AIFM3Q96NN9 605 aa20.19■□□□□ 0.82
RRP1-202ENST00000471909 EP400Q96L91 3159 aa20.19■□□□□ 0.82
RRP1-202ENST00000471909 MYH15Q9Y2K3 1946 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 SMIM22K7EJ46 135 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 CDKL5O76039 1030 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 POLR3DP05423 398 aaPredicted RBP20.18■□□□□ 0.82
RRP1-202ENST00000471909 DMTNQ08495 405 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 UTP14CQ5TAP6 766 aaKnown RBP20.18■□□□□ 0.82
RRP1-202ENST00000471909 RBM43Q6ZSC3 357 aaKnown RBP20.18■□□□□ 0.82
RRP1-202ENST00000471909 TXNRD3Q86VQ6 643 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 CKAP2LQ8IYA6 745 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 ZKSCAN3Q9BRR0 538 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 SLC12A7Q9Y666 1083 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 GOLGA8AA7E2F4 631 aa20.18■□□□□ 0.82
RRP1-202ENST00000471909 TNRC6CQ9HCJ0 1690 aaKnown RBP20.18■□□□□ 0.82
RRP1-202ENST00000471909 CCDC69A6NI79 296 aa20.17■□□□□ 0.82
RRP1-202ENST00000471909 MINDY4BA8MYZ0 360 aa20.17■□□□□ 0.82
RRP1-202ENST00000471909 KIF28PB7ZC32 967 aa20.17■□□□□ 0.82
RRP1-202ENST00000471909 SLC51AQ86UW1 340 aa20.17■□□□□ 0.82
RRP1-202ENST00000471909 NSUN4Q96CB9 384 aaKnown RBP20.17■□□□□ 0.82
RRP1-202ENST00000471909 ALG1Q9BT22 464 aa20.17■□□□□ 0.82
RRP1-202ENST00000471909 RNF41Q9H4P4 317 aaPredicted RBP20.17■□□□□ 0.82
RRP1-202ENST00000471909 RTEL1Q9NZ71 1219 aa20.17■□□□□ 0.82
RRP1-202ENST00000471909 ANAPC4Q9UJX5 808 aa20.17■□□□□ 0.82
RRP1-202ENST00000471909 PDS5AQ29RF7 1337 aaKnown RBP20.17■□□□□ 0.82
RRP1-202ENST00000471909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.17■□□□□ 0.82
RRP1-202ENST00000471909 RANBP6O60518 1105 aaKnown RBP20.17■□□□□ 0.82
RRP1-202ENST00000471909 KIF23Q02241 960 aaPredicted RBP20.17■□□□□ 0.82
RRP1-202ENST00000471909 CPLX2Q6PUV4 134 aaKnown RBP20.17■□□□□ 0.82
RRP1-202ENST00000471909 IRS2Q9Y4H2 1338 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 ZSCAN20P17040 1043 aaPredicted RBP20.16■□□□□ 0.82
RRP1-202ENST00000471909 CBX1P83916 185 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 MECOMQ03112 1051 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 TYRO3Q06418 890 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 CCAR1Q8IX12 1150 aaKnown RBP20.16■□□□□ 0.82
RRP1-202ENST00000471909 CNBD1Q8NA66 436 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 RGS22Q8NE09 1264 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 GOLPH3LQ9H4A5 285 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 RIOK3O14730 519 aaKnown RBP20.16■□□□□ 0.82
RRP1-202ENST00000471909 BRAPQ7Z569 592 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 FAM200AQ8TCP9 573 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 MRVI1Q9Y6F6 885 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 CHD4Q14839 1912 aa20.16■□□□□ 0.82
RRP1-202ENST00000471909 SART3Q15020 963 aaKnown RBP20.15■□□□□ 0.82
RRP1-202ENST00000471909 MYSM1Q5VVJ2 828 aa20.15■□□□□ 0.82
RRP1-202ENST00000471909 PDCL2Q8N4E4 241 aa20.15■□□□□ 0.82
RRP1-202ENST00000471909 ADRA2BP18089 450 aa20.15■□□□□ 0.82
RRP1-202ENST00000471909 IARSP41252 1262 aaKnown RBP20.15■□□□□ 0.82
RRP1-202ENST00000471909 ME1P48163 572 aa20.15■□□□□ 0.82
RRP1-202ENST00000471909 WTAPQ15007 396 aa20.15■□□□□ 0.82
RRP1-202ENST00000471909 LINC00301Q8NCQ3 95 aa20.15■□□□□ 0.82
RRP1-202ENST00000471909 MTA3Q9BTC8 594 aa20.15■□□□□ 0.82
RRP1-202ENST00000471909 BRIP1Q9BX63 1249 aa20.15■□□□□ 0.82
RRP1-202ENST00000471909 CLIC4Q9Y696 253 aa20.15■□□□□ 0.82
RRP1-202ENST00000471909 PRDX5P30044 214 aa20.14■□□□□ 0.82
RRP1-202ENST00000471909 GRAPQ13588 217 aa20.14■□□□□ 0.82
RRP1-202ENST00000471909 GRAPLQ8TC17 118 aaPredicted RBP20.14■□□□□ 0.82
RRP1-202ENST00000471909 NID2Q14112 1375 aa20.14■□□□□ 0.81
RRP1-202ENST00000471909 CYP2D7A0A087X1C5 515 aa20.14■□□□□ 0.81
RRP1-202ENST00000471909 SNW1Q13573 536 aaKnown RBP20.14■□□□□ 0.81
RRP1-202ENST00000471909 KRT40Q6A162 431 aa20.14■□□□□ 0.81
RRP1-202ENST00000471909 SYNE3Q6ZMZ3 975 aa20.14■□□□□ 0.81
RRP1-202ENST00000471909 QTRT2Q9H974 415 aaKnown RBP20.14■□□□□ 0.81
RRP1-202ENST00000471909 PCDHA7Q9UN72 937 aa20.14■□□□□ 0.81
RRP1-202ENST00000471909 UBE2Q2LH0YL09 131 aa20.13■□□□□ 0.81
RRP1-202ENST00000471909 PRR5LQ6MZQ0 368 aa20.13■□□□□ 0.81
RRP1-202ENST00000471909 POLR3EQ9NVU0 708 aa20.13■□□□□ 0.81
RRP1-202ENST00000471909 ZHX1Q9UKY1 873 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms