RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 KCNF1Q9H3M0 494 aa9.35□□□□□ -0.91
SSB-209ENST00000470621 GSX1Q9H4S2 264 aaPredicted RBP9.35□□□□□ -0.91
SSB-209ENST00000470621 PCDHA4Q9UN74 947 aa9.35□□□□□ -0.91
SSB-209ENST00000470621 RAXQ9Y2V3 346 aa9.35□□□□□ -0.91
SSB-209ENST00000470621 SYNGAP1Q96PV0 1343 aa9.34□□□□□ -0.91
SSB-209ENST00000470621 DCDC2CA8MYV0 355 aa9.34□□□□□ -0.91
SSB-209ENST00000470621 MAP4P27816 1152 aaKnown RBP9.34□□□□□ -0.91
SSB-209ENST00000470621 ZC3H12AQ5D1E8 599 aaKnown RBP9.34□□□□□ -0.91
SSB-209ENST00000470621 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
SSB-209ENST00000470621 RHOVQ96L33 236 aa9.34□□□□□ -0.91
SSB-209ENST00000470621 KBTBD4Q9NVX7 518 aa9.34□□□□□ -0.91
SSB-209ENST00000470621 HMX2A2RU54 273 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 HYAL3O43820 417 aaPredicted RBP9.33□□□□□ -0.92
SSB-209ENST00000470621 SLFN14P0C7P3 912 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 VAMP1P23763 118 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 ASPAP45381 313 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 USP11P51784 963 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 INPP5AQ14642 412 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 BEND4Q6ZU67 534 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 TRIM42Q8IWZ5 723 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 C7orf69Q9H7B7 122 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 DISC1Q9NRI5 854 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 HIF3AQ9Y2N7 669 aa9.33□□□□□ -0.92
SSB-209ENST00000470621 PF4P02776 101 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 NEFMP07197 916 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 RXRBP28702 533 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 GBP2P32456 591 aaPredicted RBP9.32□□□□□ -0.92
SSB-209ENST00000470621 FANCCQ00597 558 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 FAM160A1Q05DH4 1040 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 TTLL4Q14679 1199 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 PPM1JQ5JR12 505 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 LCE3BQ5TA77 95 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 LRFN4Q6PJG9 635 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 C12orf40Q86WS4 652 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 TMEM74Q96NL1 305 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 RSRP1Q9BUV0 290 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 SEMA6CQ9H3T2 930 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 ACSS3Q9H6R3 686 aa9.32□□□□□ -0.92
SSB-209ENST00000470621 MINDY4BA8MYZ0 360 aa9.31□□□□□ -0.92
SSB-209ENST00000470621 RLBP1P12271 317 aa9.31□□□□□ -0.92
SSB-209ENST00000470621 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
SSB-209ENST00000470621 HS2ST1Q7LGA3 356 aa9.31□□□□□ -0.92
SSB-209ENST00000470621 PLPPR2Q96GM1 343 aa9.31□□□□□ -0.92
SSB-209ENST00000470621 MIR1-1HGQ9H1L0 117 aa9.31□□□□□ -0.92
SSB-209ENST00000470621 STOML1Q9UBI4 398 aa9.31□□□□□ -0.92
SSB-209ENST00000470621 GGT7Q9UJ14 662 aa9.31□□□□□ -0.92
SSB-209ENST00000470621 NFICP08651 508 aa9.3□□□□□ -0.92
SSB-209ENST00000470621 LMNB1P20700 586 aa9.3□□□□□ -0.92
SSB-209ENST00000470621 NTF4P34130 210 aa9.3□□□□□ -0.92
SSB-209ENST00000470621 RBM25P49756 843 aaKnown RBP9.3□□□□□ -0.92
SSB-209ENST00000470621 SCARA3Q6AZY7 606 aa9.3□□□□□ -0.92
SSB-209ENST00000470621 BNC2Q6ZN30 1099 aaPredicted RBP9.3□□□□□ -0.92
SSB-209ENST00000470621 EZH1Q92800 747 aaPredicted RBP9.3□□□□□ -0.92
SSB-209ENST00000470621 JARID2Q92833 1246 aaPredicted RBP9.3□□□□□ -0.92
SSB-209ENST00000470621 ATXN3LQ9H3M9 355 aa9.3□□□□□ -0.92
SSB-209ENST00000470621 LGR6Q9HBX8 967 aa9.3□□□□□ -0.92
SSB-209ENST00000470621 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.29□□□□□ -0.92
SSB-209ENST00000470621 DYNC1LI2O43237 492 aaPredicted RBP9.29□□□□□ -0.92
SSB-209ENST00000470621 ZNF76P36508 570 aa9.29□□□□□ -0.92
SSB-209ENST00000470621 ERVK-24P63145 666 aa9.29□□□□□ -0.92
SSB-209ENST00000470621 HNRNPUQ00839 825 aaKnown RBP eCLIP9.29□□□□□ -0.92
SSB-209ENST00000470621 RING1Q06587 406 aa9.29□□□□□ -0.92
SSB-209ENST00000470621 CAMK2GQ13555 558 aaPredicted RBP9.29□□□□□ -0.92
SSB-209ENST00000470621 WIPI1Q5MNZ9 446 aaPredicted RBP9.29□□□□□ -0.92
SSB-209ENST00000470621 UBE3DQ7Z6J8 389 aa9.29□□□□□ -0.92
SSB-209ENST00000470621 CLEC10AQ8IUN9 316 aa9.29□□□□□ -0.92
SSB-209ENST00000470621 RELL1Q8IUW5 271 aa9.29□□□□□ -0.92
SSB-209ENST00000470621 SHISA5Q8N114 240 aa9.29□□□□□ -0.92
SSB-209ENST00000470621 FAM83CQ9BQN1 747 aa9.29□□□□□ -0.92
SSB-209ENST00000470621 DAGLAQ9Y4D2 1042 aa9.29□□□□□ -0.92
SSB-209ENST00000470621 FAM95CA0A1B0GW59 222 aa9.28□□□□□ -0.92
SSB-209ENST00000470621 FSTP19883 344 aa9.28□□□□□ -0.92
SSB-209ENST00000470621 GARTP22102 1010 aa9.28□□□□□ -0.92
SSB-209ENST00000470621 LMNB2Q03252 620 aa9.28□□□□□ -0.92
SSB-209ENST00000470621 NFKBIBQ15653 356 aa9.28□□□□□ -0.92
SSB-209ENST00000470621 ELMO3Q96BJ8 720 aa9.28□□□□□ -0.92
SSB-209ENST00000470621 PIDD1Q9HB75 910 aa9.28□□□□□ -0.92
SSB-209ENST00000470621 PCDHGB7Q9Y5F8 929 aa9.28□□□□□ -0.92
SSB-209ENST00000470621 PRAMEF27A3QJZ7 478 aa9.27□□□□□ -0.93
SSB-209ENST00000470621 RNGTTO60942 597 aaKnown RBP9.27□□□□□ -0.93
SSB-209ENST00000470621 F13A1P00488 732 aa9.27□□□□□ -0.93
SSB-209ENST00000470621 ZNF394Q53GI3 561 aa9.27□□□□□ -0.93
SSB-209ENST00000470621 RNF214Q8ND24 703 aa9.27□□□□□ -0.93
SSB-209ENST00000470621 ISL2Q96A47 359 aa9.27□□□□□ -0.93
SSB-209ENST00000470621 PWP1Q13610 501 aa9.26□□□□□ -0.93
SSB-209ENST00000470621 FBXL19Q6PCT2 694 aa9.26□□□□□ -0.93
SSB-209ENST00000470621 SMYD4Q8IYR2 804 aaPredicted RBP9.26□□□□□ -0.93
SSB-209ENST00000470621 GOLM1Q8NBJ4 401 aa9.26□□□□□ -0.93
SSB-209ENST00000470621 MFSD14AQ96MC6 490 aa9.26□□□□□ -0.93
SSB-209ENST00000470621 YIPF2Q9BWQ6 316 aa9.26□□□□□ -0.93
SSB-209ENST00000470621 METTL5Q9NRN9 209 aaKnown RBP9.26□□□□□ -0.93
SSB-209ENST00000470621 ADAMTS1Q9UHI8 967 aa9.26□□□□□ -0.93
SSB-209ENST00000470621 FAM221AA4D161 298 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 GFRA2O00451 464 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 SCAMP3O14828 347 aaKnown RBP9.25□□□□□ -0.93
SSB-209ENST00000470621 HDLBPQ00341 1268 aaKnown RBP9.25□□□□□ -0.93
SSB-209ENST00000470621 NFIAQ12857 509 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 SNAP47Q5SQN1 464 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 ZBTB37Q5TC79 503 aa9.25□□□□□ -0.93
SSB-209ENST00000470621 C9orf131Q5VYM1 1079 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms