RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 RNF135Q8IUD6 432 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.89□□□□□ -1.31
TRA2B-209ENST00000466832 ZFRQ96KR1 1074 aaKnown RBP6.89□□□□□ -1.31
TRA2B-209ENST00000466832 ANO2Q9NQ90 1003 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 CCDC87Q9NVE4 849 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 SAGE1Q9NXZ1 904 aa6.89□□□□□ -1.31
TRA2B-209ENST00000466832 NEK4P51957 841 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 PTK2Q05397 1052 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 HS1BP3Q53T59 392 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 POTEEQ6S8J3 1075 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 PHTF2Q8N3S3 785 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 PLPP7Q8NBV4 271 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 ARMC2Q8NEN0 867 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 RILPL2Q969X0 211 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 SYAP1Q96A49 352 aaPredicted RBP6.88□□□□□ -1.31
TRA2B-209ENST00000466832 DIAPH3Q9NSV4 1193 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 LMBRD1Q9NUN5 540 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.88□□□□□ -1.31
TRA2B-209ENST00000466832 ATP6V1DQ9Y5K8 247 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 MYH7P12883 1935 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 MYH15Q9Y2K3 1946 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 PALLDQ8WX93 1383 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 XRCC6P12956 609 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRA2B-209ENST00000466832 ATP5JP18859 108 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 PSMA5P28066 241 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 OS9Q13438 667 aaPredicted RBP6.88□□□□□ -1.31
TRA2B-209ENST00000466832 ANKRD1Q15327 319 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 MAP7D1Q3KQU3 841 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 SUCLG2Q96I99 432 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 TEX13AQ9BXU3 409 aaPredicted RBP6.88□□□□□ -1.31
TRA2B-209ENST00000466832 NLRP2Q9NX02 1062 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 CCDC171Q6TFL3 1326 aa6.88□□□□□ -1.31
TRA2B-209ENST00000466832 CIAO1O76071 339 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 IGKV5-2P06315 115 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 CCDC173Q0VFZ6 552 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 KRT32Q14532 448 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 PROSER3Q2NL68 480 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 RNF20Q5VTR2 975 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 PDXDC2PQ6P474 469 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 C1orf216Q8TAB5 229 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 SP7Q8TDD2 431 aaPredicted RBP6.87□□□□□ -1.31
TRA2B-209ENST00000466832 KAZALD1Q96I82 304 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 PPP1R9BQ96SB3 815 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 LIMCH1Q9UPQ0 1083 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 SNX14Q9Y5W7 946 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 LETM1O95202 739 aaPredicted RBP6.87□□□□□ -1.31
TRA2B-209ENST00000466832 RFX5P48382 616 aaPredicted RBP6.87□□□□□ -1.31
TRA2B-209ENST00000466832 CASP7P55210 303 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 KCNQ4P56696 695 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 CABP4P57796 275 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 EML3Q32P44 896 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 CYP4F22Q6NT55 531 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 TRIM50Q86XT4 487 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 DHX37Q8IY37 1157 aaKnown RBP6.87□□□□□ -1.31
TRA2B-209ENST00000466832 OTUD5Q96G74 571 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 LRCH3Q96II8 777 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 BICC1Q9H694 974 aaKnown RBP6.87□□□□□ -1.31
TRA2B-209ENST00000466832 STXBP5LQ9Y2K9 1186 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 PCDHB9Q9Y5E1 797 aa6.87□□□□□ -1.31
TRA2B-209ENST00000466832 DICER1Q9UPY3 1922 aaKnown RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 LAMA4Q16363 1823 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 TAF1LQ8IZX4 1826 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 BHMG1C9JSJ3 638 aaPredicted RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 H7C1W4 665 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 CYP27B1O15528 508 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 FMNL1O95466 1100 aaPredicted RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 KCNA3P22001 575 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 CTHP32929 405 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 SERPINB4P48594 390 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 TRIM28Q13263 835 aaKnown RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 NECTIN1Q15223 517 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 USPL1Q5W0Q7 1092 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 XAGE3Q8WTP9 111 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 ZNF496Q96IT1 587 aaPredicted RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 HHIPL1Q96JK4 782 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 PLA2G12BQ9BX93 195 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 IL1RAPL2Q9NP60 686 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 ZDHHC9Q9Y397 364 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 CCDC88AQ3V6T2 1871 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 UBR3Q6ZT12 1888 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 SASH1O94885 1247 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 ZKSCAN1P17029 563 aaPredicted RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 MARSP56192 900 aaKnown RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 AACSQ86V21 672 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 CCDC191Q8NCU4 936 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 ZCRB1Q8TBF4 217 aaKnown RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 MAP4K1Q92918 833 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 THAP11Q96EK4 314 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 KIAA1522Q9P206 1035 aaPredicted RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 PALD1Q9ULE6 856 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 DDX49Q9Y6V7 483 aaKnown RBP6.86□□□□□ -1.31
TRA2B-209ENST00000466832 SH3TC1Q8TE82 1336 aa6.86□□□□□ -1.31
TRA2B-209ENST00000466832 ZNF609O15014 1411 aa6.85□□□□□ -1.31
TRA2B-209ENST00000466832 ADAMTSL1Q8N6G6 1762 aa6.85□□□□□ -1.31
TRA2B-209ENST00000466832 MMP10P09238 476 aa6.85□□□□□ -1.31
TRA2B-209ENST00000466832 ATP1A2P50993 1020 aa6.85□□□□□ -1.31
TRA2B-209ENST00000466832 DPYDQ12882 1025 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms